RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Lnx1O70263 728 aa19■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Myd88P22366 296 aa19■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Cep57l1Q8VDS7 400 aa19■□□□□ 0.63
Ckap4-201ENSMUST00000053871 TrhQ62361 256 aa18.99■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Zfp113Q8C689 439 aa18.99■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Thsd7aQ69ZU6 1645 aa18.99■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Zbtb40Q6PCS8 1258 aa18.99■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Rbm17Q8JZX4 405 aaKnown RBP18.99■□□□□ 0.63
Ckap4-201ENSMUST00000053871 BcorQ8CGN4 1759 aa18.99■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Nek11Q8C0Q4 628 aa18.99■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Pnma3Q8JZW8 466 aa18.99■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Bicd2Q921C5 820 aa18.99■□□□□ 0.63
Ckap4-201ENSMUST00000053871 1700006A11RikB9EHI3 544 aa18.98■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Ppp6r1Q7TSI3 856 aa18.98■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Igbp1bQ9QZ29 343 aa18.98■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Stat1P42225 749 aa18.98■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Ccdc158Q8CDI6 1109 aa18.98■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Mindy4Q3UQI9 744 aa18.97■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Cwc25Q9DBF7 416 aa18.97■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Spata31d1bE9QA57 1361 aa18.97■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Prl3d3A0A0M6L0J6 224 aa18.97■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Hand2Q61039 217 aa18.97■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Ints5Q8CHT3 1018 aa18.97■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Bach2P97303 839 aa18.97■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Ano1Q8BHY3 960 aa18.97■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Amigo3Q8C2S7 508 aa18.97■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Mb21d2Q8C525 428 aa18.96■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Mmel1Q9JLI3 765 aa18.96■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Siglec1Q62230 1695 aa18.96■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Ltb4r2Q9JJL9 360 aa18.96■□□□□ 0.63
Ckap4-201ENSMUST00000053871 Mctp1E9PV86 951 aa18.95■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Fam184aE9PW83 1143 aa18.95■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Anxa1P10107 346 aaKnown RBP18.95■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Mknk2Q8CDB0 459 aa18.95■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Tns2Q8CGB6 1400 aa18.95■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Cyp2d10P24456 504 aa18.95■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Usp25P57080 1055 aa18.95■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Anp32cQ64G17 123 aa18.95■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Ncoa5Q91W39 579 aaKnown RBP18.95■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Hmg20bQ9Z104 317 aa18.95■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Ccdc173A0JLY1 547 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Sh3bgrQ9WUZ7 214 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Gpatch11Q3UFS4 262 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Atg9aQ68FE2 551 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Kcnq3Q8K3F6 873 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 TnmdQ9EP64 317 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Spty2d1Q68FG3 682 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Smim5Q8BT42 78 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Rapgef3Q8VCC8 918 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 SnrkQ8VDU5 748 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 PdcQ9QW08 244 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Krt85Q9Z2T6 507 aa18.94■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Trim56Q80VI1 734 aaKnown RBP18.93■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Pms1Q8K119 917 aa18.93■□□□□ 0.62
Ckap4-201ENSMUST00000053871 GptQ8QZR5 496 aa18.93■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Ripk4Q9ERK0 786 aa18.93■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Nfe2l3Q9WTM4 660 aa18.93■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Ddx60E9PZQ1 1711 aa18.93■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Fsd1Q7TPM6 496 aa18.93■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Ssfa2Q922B9 1252 aa18.93■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Erc1Q99MI1 1120 aa18.93■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Gli3Q61602 1583 aa18.93■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Plekhd1B2RPU2 505 aa18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Ppp1r10Q80W00 888 aaKnown RBP18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Smc4Q8CG47 1286 aa18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Aox1O54754 1333 aa18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Brpf3B2KF05 1204 aaKnown RBP18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Tpm2P58774 284 aa18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Ccnl1Q52KE7 532 aaKnown RBP18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Pdcl2Q78Y63 240 aa18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Tmem67Q8BR76 992 aa18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Tmc2Q8R4P4 888 aa18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Cap2Q9CYT6 476 aa18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Nol10Q5RJG1 687 aaKnown RBP18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Smg7Q5RJH6 1138 aaKnown RBP18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 NfkbibQ60778 359 aa18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 IncenpQ9WU62 880 aa18.92■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Col4a1P02463 1669 aa18.91■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Nxf7Q80SZ6 620 aaKnown RBP18.91■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Plcd1Q8R3B1 756 aa18.91■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Morc2aQ69ZX6 1030 aa18.91■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Trim52Q8CDV4 233 aa18.91■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Nrxn3Q6P9K9 1571 aa18.9■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Ppp4r3aQ6P2K6 820 aa18.9■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Krt25Q8VCW2 446 aa18.9■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Mx2Q9WVP9 655 aa18.9■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Kansl3A2RSY1 903 aaKnown RBP18.9■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Tyro3P55144 880 aa18.9■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Hvcn1Q3U2S8 269 aa18.9■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Rab3gap1Q80UJ7 981 aa18.9■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Ptcd1Q8C2E4 695 aaKnown RBP18.9■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Wdr33Q8K4P0 1330 aaKnown RBP18.9■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Ythdc1E9Q5K9 736 aaKnown RBP18.89■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Eya2O08575 532 aa18.89■□□□□ 0.62
Ckap4-201ENSMUST00000053871 Nlrp1aQ2LKU9 1182 aa18.89■□□□□ 0.62
Ckap4-201ENSMUST00000053871 AidaQ8C4Q6 305 aa18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Serpina10Q8R121 448 aa18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Add3Q9QYB5 706 aaKnown RBP18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 HdgfP51859 237 aaKnown RBP18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Hspd1P63038 573 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms