RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Ptpdc1Q6NZK8 747 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Mtmr3Q8K296 1196 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Sdad1Q80UZ2 687 aaKnown RBP5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Jakmip1Q8BVL9 626 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Zc3h13E9Q784 1729 aaKnown RBP5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Gzf1Q4VBD9 706 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Ccdc172Q810N9 267 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Usp37Q8C0R0 979 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Cdr1E9Q0B4 517 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Epb41l2O70318 988 aaKnown RBP5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Opa1P58281 960 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Slc38a10Q5I012 1090 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Ripk4Q9ERK0 786 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Iqsec2Q5DU25 1478 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Kif24Q6NWW5 1356 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Prkar2bP31324 416 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Tbc1d9Q3UYK3 1264 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Ccdc181Q80ZU5 509 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Wdhd1P59328 1117 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Ift74Q8BKE9 600 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Mdc1Q5PSV9 1707 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Kiaa1107Q80TK0 1369 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Zfp91Q62511 572 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Hook2Q7TMK6 716 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 HomezQ80W88 542 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Arfgap2Q99K28 520 aa5.23□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Abca9Q8K449 1623 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Cps1Q8C196 1500 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Drc7Q6V3W6 876 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Rnf41Q8BH75 317 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Gbp9Q8BTS3 619 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Tmx3Q8BXZ1 456 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Fam76aQ922G2 307 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Mmel1Q9JLI3 765 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Smarcc2Q6PDG5 1213 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Creld2Q9CYA0 350 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Mx2Q9WVP9 655 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Plcb3P51432 1234 aaKnown RBP5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Plcd3Q8K2J0 785 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Pdlim2Q8R1G6 349 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Calml4Q91WQ9 153 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 HnrnpmQ9D0E1 729 aaKnown RBP5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 4933428M09RikQ9D3X3 192 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Spef2Q8C9J3 1734 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Capn2O08529 700 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Washc4Q3UMB9 1173 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Sf3b2Q3UJB0 878 aaKnown RBP5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Cfap100Q80VN0 613 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Nucb1Q02819 459 aaKnown RBP5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 PcQ05920 1178 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Rnf187Q8BFX1 236 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Sept3Q9Z1S5 350 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Nol11Q8BJW5 723 aaKnown RBP5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Ampd3O08739 766 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Tulp1Q9Z273 543 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Myh11O08638 1972 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 MarsQ68FL6 902 aaKnown RBP5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Ttc27Q8CD92 847 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Ube2q2Q8K2Z8 378 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Arhgef6Q8K4I3 771 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Carmil3Q3UFQ8 1375 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Eva1cP58659 440 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Rufy2Q8R4C2 606 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 AdgbG3UZ78 1657 aa5.22□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Xrn1P97789 1719 aaKnown RBP5.21□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Dip2cE9PWR4 1557 aa5.21□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Atp8b1Q148W0 1251 aa5.21□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Btbd11Q6GQW0 1109 aa5.21□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Trak2Q6P9N8 913 aa5.21□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Stac3Q8BZ71 360 aa5.21□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Rreb1Q3UH06 1700 aaKnown RBP5.21□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Lrsam1Q80ZI6 727 aa5.21□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Krt7Q9DCV7 457 aa5.21□□□□□ -1.57
Prkdc-201ENSMUST00000023352 Specc1lQ2KN98 1118 aaKnown RBP5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Trim27Q62158 513 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Stk38Q91VJ4 465 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Hip1rQ9JKY5 1068 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Duxf3A0A0N4SV92 674 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ttc12Q8BW49 704 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rcan1Q9JHG6 198 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Erbb3Q61526 1339 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cep63Q3UPP8 700 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rdm1Q9CQK3 281 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Uchl5Q9WUP7 329 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gm21671G3UY31 267 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ess2O70279 479 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Dmrt2Q8BG36 561 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 CltcQ68FD5 1675 aaKnown RBP5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Top1Q04750 767 aaKnown RBP5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tax1bp1Q3UKC1 814 aaKnown RBP5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Efcab8Q8C9R9 203 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Chd1lQ9CXF7 900 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gm7361D3Z6R1 267 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Trim34bJ3QNR8 485 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Sept7O55131 436 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cfap73J3QPZ5 306 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ncoa4Q5U4H9 625 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Agtpbp1Q641K1 1218 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Fam13aQ8BGI4 693 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Stx6Q9JKK1 255 aa5.21□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms