RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Q3UJC8 639 aa21.71■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Trak2Q6P9N8 913 aa21.71■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Safb2Q80YR5 991 aaKnown RBP21.71■■□□□ 1.07
Ubp1-201ENSMUST00000009885 AatfQ9JKX4 526 aaKnown RBP21.71■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Fam76aQ922G2 307 aa21.7■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Ltv1Q6NSQ7 470 aaKnown RBP21.7■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Ccdc82Q6PG04 518 aa21.7■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Tsen34Q8BMZ5 316 aa21.7■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Srek1Q8BZX4 494 aaKnown RBP21.7■■□□□ 1.06
Ubp1-201ENSMUST00000009885 CtcfQ61164 736 aaKnown RBP21.7■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Gtpbp6Q3U6U5 514 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Fam228bQ497Q6 232 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 PsapQ61207 557 aaKnown RBP21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 PzpQ61838 1495 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Ktn1Q61595 1327 aaKnown RBP21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Klhl34A2AI76 644 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Gng11P61953 73 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Rufy2Q8R4C2 606 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Mrps25Q9D125 171 aaKnown RBP21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Ehbp1l1Q99MS7 1716 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Ubn2Q80WC1 1314 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Zbtb21E9Q444 1094 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Tmc2Q8R4P4 888 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Lrrfip2Q91WK0 415 aa21.69■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Aox4Q3TYQ9 1336 aa21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Rbbp8nlA2ABX0 614 aa21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Cyp2d11P24457 504 aa21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Lamb3Q61087 1168 aa21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Arhgef1Q61210 920 aaKnown RBP21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Bend3Q6PAL0 825 aa21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Dnm3Q8BZ98 863 aa21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Rhot2Q8JZN7 620 aa21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Fndc1E9Q043 1732 aa21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Atf5O70191 283 aa21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Lmbr1lQ9D1E5 489 aa21.68■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Cdc42bpgQ80UW5 1551 aa21.67■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Kmt5bQ3U8K7 883 aa21.67■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Spty2d1Q68FG3 682 aa21.67■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Ccdc155Q80VJ8 648 aa21.67■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Golph3lQ8R088 285 aaKnown RBP21.67■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Prdm4Q80V63 803 aa21.67■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Plekhg1F6S200 1446 aa21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Hand2Q61039 217 aa21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Mei4Q8BRM6 389 aa21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Hmg20bQ9Z104 317 aa21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Rrp1P56183 494 aaKnown RBP21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Znhit6Q3UFB2 460 aaKnown RBP21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 GpkowQ56A08 488 aa21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Prpf4bQ61136 1007 aaKnown RBP21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Map9Q3TRR0 646 aa21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Vps54Q5SPW0 977 aa21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Dmrt2Q8BG36 561 aa21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Cdca8Q8BHX3 289 aa21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 TatQ8QZR1 454 aa21.66■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Gm3409A0A0G2JE67 319 aa21.65■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Surf1P09925 306 aa21.65■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Lmbrd2Q8C561 694 aa21.65■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Dnajc2P54103 621 aaKnown RBP21.65■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Ccdc34Q3UI66 367 aa21.65■■□□□ 1.06
Ubp1-201ENSMUST00000009885 PtprmP28828 1452 aa21.65■■□□□ 1.06
Ubp1-201ENSMUST00000009885 ItpripQ3TNL8 555 aa21.65■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Clstn1Q9EPL2 979 aa21.65■■□□□ 1.06
Ubp1-201ENSMUST00000009885 Dusp10Q9ESS0 483 aa21.65■■□□□ 1.06
Ubp1-201ENSMUST00000009885 4930407I10RikD3Z5T8 1512 aa21.64■■□□□ 1.06
Ubp1-201ENSMUST00000009885 CoilQ5SU73 570 aa21.64■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Ulbp1Q8HWA3 334 aa21.64■■□□□ 1.05
Ubp1-201ENSMUST00000009885 LratQ9JI60 231 aa21.64■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Diaph1O08808 1255 aa21.64■■□□□ 1.05
Ubp1-201ENSMUST00000009885 LyarQ08288 388 aaKnown RBP21.64■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Col4a3bpQ9EQG9 624 aa21.64■■□□□ 1.05
Ubp1-201ENSMUST00000009885 A0A1L1SQF0 893 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Znf326O88291 580 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 GmnnO88513 206 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Grm8P47743 908 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 MicalclQ9D5U9 680 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 DonsonQ9QXP4 560 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Prl7a2O54831 253 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Nxf7Q80SZ6 620 aaKnown RBP21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Golim4Q8BXA1 655 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Zeb2Q9R0G7 1215 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Ino80Q6ZPV2 1559 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 AceP09470 1312 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 CoblQ5NBX1 1337 aaKnown RBP21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Abcb6Q9DC29 842 aa21.63■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Eif3aP23116 1344 aaKnown RBP21.62■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Larp6Q8BN59 492 aa21.62■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Rai14Q9EP71 979 aaKnown RBP21.62■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Cwc15Q9JHS9 229 aaKnown RBP21.62■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Ess2O70279 479 aa21.62■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Irf9Q61179 399 aa21.62■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Hspa4Q61316 841 aa21.62■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Q66JV7 365 aa21.62■■□□□ 1.05
Ubp1-201ENSMUST00000009885 U2af1l4Q8BGJ9 220 aa21.62■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Nlgn1Q99K10 843 aa21.62■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Cnksr1A2A9K7 700 aa21.61■■□□□ 1.05
Ubp1-201ENSMUST00000009885 XpcP51612 930 aa21.61■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Ddx58Q6Q899 926 aa21.61■■□□□ 1.05
Ubp1-201ENSMUST00000009885 MlecQ6ZQI3 291 aaKnown RBP21.61■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Tmem67Q8BR76 992 aa21.61■■□□□ 1.05
Ubp1-201ENSMUST00000009885 Hps3Q91VB4 1002 aa21.61■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms