RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 InhaQ04997 366 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Xkr7Q5GH64 580 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Dvl2Q60838 736 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Sim2Q61079 657 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Serpinf2Q61247 491 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 ZpbpQ62522 350 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Zc3h12dQ8BIY3 533 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Plekhm3Q8BM47 761 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ncr1Q8C567 325 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Tmem150cQ8C8S3 249 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Dlgap5Q8K4R9 808 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 RbksQ8R1Q9 323 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr1232Q8VEX7 311 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr108Q8VFA1 320 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr651Q8VG78 313 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr658Q8VGV5 323 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Rfpl4aQ8VH31 287 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Pcnx3Q8VI59 2028 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Tmem30cQ9D4D7 342 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ift22Q9DAI2 185 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Eci2Q9WUR2 391 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Chrna10B2RX82 447 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Colca2F8VPY8 239 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Gpr50O88495 591 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Nr4a1P12813 601 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 CtsaP16675 474 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 PpiaP17742 164 aaKnown RBP13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 RoraP51448 523 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Elavl1P70372 326 aaKnown RBP13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Jmjd8Q3TA59 316 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Defb28Q3V2L0 89 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Coq8bQ566J8 533 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Bend6Q6PFX2 281 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Eid2Q6X7S9 236 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Exosc3Q7TQK4 274 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Lrrtm2Q8BGA3 515 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 A730061H03RikQ8BGD2 154 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfml2aQ8BHP7 681 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Acaa2Q8BWT1 397 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Rfwd3Q8CIK8 774 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Adipor1Q91VH1 375 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 D930007J09RikQ9D2K6 131 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ceacam20Q9D2Z1 577 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Timm50Q9D880 353 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Il36aQ9JLA2 160 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ing1Q9QXV3 279 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 RlimQ9WTV7 600 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Il18bpQ9Z0M9 193 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr1076A2AK60 313 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Zfp994J3QM38 661 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 9330182O14RikJ3QNB2 140 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Socs1O35716 212 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Pdlim3O70209 316 aaKnown RBP13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 RykQ01887 594 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 B4galnt1Q09200 533 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Cmpk2Q3U5Q7 447 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Hspb6Q5EBG6 162 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Slc35g3Q5F297 340 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 NanogQ80Z64 305 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Slitrk2Q810C0 846 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 LssQ8BLN5 733 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Rad51ap1Q8C551 337 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Prps1l1Q8C5R8 318 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 RybpQ8CCI5 228 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Noxa1Q8CJ00 444 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr870Q8VGG4 311 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr170Q8VGL6 313 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Fastkd2Q922E6 689 aaKnown RBP13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Mrpl43Q99N89 183 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 GabarapQ9DCD6 117 aa13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Map1bP14873 2464 aaKnown RBP13.59□□□□□ -0.23
Nup88-202ENSMUST00000108530 Gm13124A2A752 406 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Cst3P21460 140 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 CryabP23927 175 aaKnown RBP13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 LvrnQ2KHK3 559 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Khdc4Q3TCX3 612 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Rpa2Q62193 270 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 ShhQ62226 437 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Ppp3r2Q63811 179 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 LcorQ6ZPI3 433 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Lrrc39Q8BGI7 337 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Mterf4Q8BVN4 346 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Cnot2Q8C5L3 540 aaKnown RBP13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 St8sia6Q8K4T1 398 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr166Q8VGX2 312 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Bex4Q9CWT2 118 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Med31Q9CXU1 131 aaKnown RBP13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Gtpbp8Q9CY28 285 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Nkain1Q9D035 207 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Ethe1Q9DCM0 254 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Moap1Q9ERH6 352 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 IghdA0A0A6YW14 291 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Maml2F6U238 1170 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Zbtb25G3UW50 439 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Rpl6P47911 296 aaKnown RBP13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Sox3P53784 375 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Rps3aP97351 264 aaKnown RBP13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Obox3Q3UT54 335 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Dvl3Q61062 716 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Snap91Q61548 901 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 86.6 ms