Protein–RNA interactions for Protein: Q8VH31

Rfpl4a, Ret finger protein-like 4A, mousemouse

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4aQ8VH31 Gm25239-201ENSMUST00000174915 86 ntBASIC37.2■■■■□ 3.55
Rfpl4aQ8VH31 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
Rfpl4aQ8VH31 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Rfpl4aQ8VH31 Gm15042-201ENSMUST00000120212 883 ntBASIC32.41■■■□□ 2.78
Rfpl4aQ8VH31 Gm24109-201ENSMUST00000175489 103 ntBASIC32.29■■■□□ 2.76
Rfpl4aQ8VH31 Gm15045-201ENSMUST00000117359 883 ntBASIC31.68■■■□□ 2.66
Rfpl4aQ8VH31 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rfpl4aQ8VH31 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Rfpl4aQ8VH31 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Rfpl4aQ8VH31 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rfpl4aQ8VH31 Gm23366-201ENSMUST00000175022 89 ntBASIC31.07■■■□□ 2.56
Rfpl4aQ8VH31 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rfpl4aQ8VH31 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Rfpl4aQ8VH31 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Rfpl4aQ8VH31 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rfpl4aQ8VH31 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.13■■■□□ 2.41
Rfpl4aQ8VH31 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
Rfpl4aQ8VH31 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.91■■■□□ 2.38
Rfpl4aQ8VH31 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.83■■■□□ 2.37
Rfpl4aQ8VH31 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Rfpl4aQ8VH31 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rfpl4aQ8VH31 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rfpl4aQ8VH31 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.68■■■□□ 2.34
Rfpl4aQ8VH31 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rfpl4aQ8VH31 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rfpl4aQ8VH31 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rfpl4aQ8VH31 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rfpl4aQ8VH31 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.41■■■□□ 2.3
Rfpl4aQ8VH31 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rfpl4aQ8VH31 Gm25238-201ENSMUST00000174914 89 ntBASIC29.4■■■□□ 2.3
Rfpl4aQ8VH31 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rfpl4aQ8VH31 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rfpl4aQ8VH31 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.13■■■□□ 2.25
Rfpl4aQ8VH31 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Rfpl4aQ8VH31 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rfpl4aQ8VH31 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
Rfpl4aQ8VH31 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Rfpl4aQ8VH31 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Rfpl4aQ8VH31 Psd-208ENSMUST00000224556 2034 ntBASIC28.62■■■□□ 2.17
Rfpl4aQ8VH31 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.62■■■□□ 2.17
Rfpl4aQ8VH31 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rfpl4aQ8VH31 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.53■■■□□ 2.16
Rfpl4aQ8VH31 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
Rfpl4aQ8VH31 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.5■■■□□ 2.15
Rfpl4aQ8VH31 Gm27325-201ENSMUST00000175467 74 ntBASIC28.4■■■□□ 2.14
Rfpl4aQ8VH31 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.28■■■□□ 2.12
Rfpl4aQ8VH31 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rfpl4aQ8VH31 Gm25262-201ENSMUST00000174934 133 ntBASIC28.22■■■□□ 2.11
Rfpl4aQ8VH31 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rfpl4aQ8VH31 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Rfpl4aQ8VH31 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.01■■■□□ 2.07
Rfpl4aQ8VH31 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rfpl4aQ8VH31 Rab21-202ENSMUST00000218831 843 ntBASIC27.95■■■□□ 2.06
Rfpl4aQ8VH31 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rfpl4aQ8VH31 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rfpl4aQ8VH31 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.89■■■□□ 2.06
Rfpl4aQ8VH31 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.88■■■□□ 2.05
Rfpl4aQ8VH31 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.82■■■□□ 2.04
Rfpl4aQ8VH31 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.78■■■□□ 2.04
Rfpl4aQ8VH31 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Rfpl4aQ8VH31 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Rfpl4aQ8VH31 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.68■■■□□ 2.02
Rfpl4aQ8VH31 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Rfpl4aQ8VH31 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Rfpl4aQ8VH31 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Rfpl4aQ8VH31 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Rfpl4aQ8VH31 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rfpl4aQ8VH31 Gm26115-201ENSMUST00000175605 87 ntBASIC27.56■■■□□ 2
Rfpl4aQ8VH31 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.56■■■□□ 2
Rfpl4aQ8VH31 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.55■■■□□ 2
Rfpl4aQ8VH31 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.52■■■□□ 2
Rfpl4aQ8VH31 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rfpl4aQ8VH31 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rfpl4aQ8VH31 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rfpl4aQ8VH31 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rfpl4aQ8VH31 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Rfpl4aQ8VH31 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Rfpl4aQ8VH31 Gm8109-201ENSMUST00000194076 746 ntBASIC27.38■■□□□ 1.97
Rfpl4aQ8VH31 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rfpl4aQ8VH31 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Rfpl4aQ8VH31 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
Rfpl4aQ8VH31 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.27■■□□□ 1.96
Rfpl4aQ8VH31 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.27■■□□□ 1.96
Rfpl4aQ8VH31 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rfpl4aQ8VH31 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rfpl4aQ8VH31 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rfpl4aQ8VH31 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rfpl4aQ8VH31 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.17■■□□□ 1.94
Rfpl4aQ8VH31 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rfpl4aQ8VH31 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rfpl4aQ8VH31 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rfpl4aQ8VH31 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rfpl4aQ8VH31 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rfpl4aQ8VH31 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.04■■□□□ 1.92
Rfpl4aQ8VH31 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.03■■□□□ 1.92
Rfpl4aQ8VH31 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.98■■□□□ 1.91
Rfpl4aQ8VH31 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rfpl4aQ8VH31 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
Rfpl4aQ8VH31 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.95■■□□□ 1.9
Rfpl4aQ8VH31 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms