Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Gm25239-201ENSMUST00000174915 86 ntBASIC39.29■■■■□ 3.88
Sim2Q61079 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
Sim2Q61079 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Sim2Q61079 Gm24109-201ENSMUST00000175489 103 ntBASIC34.3■■■■□ 3.08
Sim2Q61079 Gm15042-201ENSMUST00000120212 883 ntBASIC33.88■■■■□ 3.01
Sim2Q61079 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Sim2Q61079 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Sim2Q61079 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Sim2Q61079 Gm15045-201ENSMUST00000117359 883 ntBASIC32.99■■■□□ 2.87
Sim2Q61079 Gm23366-201ENSMUST00000175022 89 ntBASIC32.79■■■□□ 2.84
Sim2Q61079 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Sim2Q61079 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.16■■■□□ 2.74
Sim2Q61079 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.89■■■□□ 2.7
Sim2Q61079 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.78■■■□□ 2.68
Sim2Q61079 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Sim2Q61079 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Sim2Q61079 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Sim2Q61079 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Sim2Q61079 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Sim2Q61079 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.26■■■□□ 2.59
Sim2Q61079 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Sim2Q61079 Gm25238-201ENSMUST00000174914 89 ntBASIC31.14■■■□□ 2.58
Sim2Q61079 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Sim2Q61079 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Sim2Q61079 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Sim2Q61079 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
Sim2Q61079 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Sim2Q61079 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Sim2Q61079 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
Sim2Q61079 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Sim2Q61079 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.18■■■□□ 2.42
Sim2Q61079 Gm25262-201ENSMUST00000174934 133 ntBASIC30.15■■■□□ 2.42
Sim2Q61079 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.12■■■□□ 2.41
Sim2Q61079 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.1■■■□□ 2.41
Sim2Q61079 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Sim2Q61079 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
Sim2Q61079 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Sim2Q61079 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Sim2Q61079 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Sim2Q61079 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.83■■■□□ 2.37
Sim2Q61079 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.69■■■□□ 2.34
Sim2Q61079 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.69■■■□□ 2.34
Sim2Q61079 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.65■■■□□ 2.34
Sim2Q61079 Gm26115-201ENSMUST00000175605 87 ntBASIC29.6■■■□□ 2.33
Sim2Q61079 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.59■■■□□ 2.33
Sim2Q61079 Gm27325-201ENSMUST00000175467 74 ntBASIC29.58■■■□□ 2.33
Sim2Q61079 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Sim2Q61079 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Sim2Q61079 Rab21-202ENSMUST00000218831 843 ntBASIC29.39■■■□□ 2.3
Sim2Q61079 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.38■■■□□ 2.29
Sim2Q61079 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Sim2Q61079 Gm8109-201ENSMUST00000194076 746 ntBASIC29.33■■■□□ 2.29
Sim2Q61079 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Sim2Q61079 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Sim2Q61079 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Sim2Q61079 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Sim2Q61079 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Sim2Q61079 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Sim2Q61079 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Sim2Q61079 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Sim2Q61079 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.97■■■□□ 2.23
Sim2Q61079 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Sim2Q61079 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.92■■■□□ 2.22
Sim2Q61079 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.86■■■□□ 2.21
Sim2Q61079 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.86■■■□□ 2.21
Sim2Q61079 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Sim2Q61079 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Sim2Q61079 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Sim2Q61079 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.59■■■□□ 2.17
Sim2Q61079 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Sim2Q61079 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Sim2Q61079 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.53■■■□□ 2.16
Sim2Q61079 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Sim2Q61079 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Sim2Q61079 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Sim2Q61079 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Sim2Q61079 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.44■■■□□ 2.14
Sim2Q61079 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.42■■■□□ 2.14
Sim2Q61079 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sim2Q61079 Gm24804-201ENSMUST00000174982 85 ntBASIC28.31■■■□□ 2.12
Sim2Q61079 Psd-208ENSMUST00000224556 2034 ntBASIC28.3■■■□□ 2.12
Sim2Q61079 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.25■■■□□ 2.11
Sim2Q61079 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.24■■■□□ 2.11
Sim2Q61079 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
Sim2Q61079 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.22■■■□□ 2.11
Sim2Q61079 Gm27322-201ENSMUST00000184007 104 ntBASIC28.2■■■□□ 2.1
Sim2Q61079 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Sim2Q61079 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.12■■■□□ 2.09
Sim2Q61079 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
Sim2Q61079 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
Sim2Q61079 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.04■■■□□ 2.08
Sim2Q61079 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.04■■■□□ 2.08
Sim2Q61079 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28■■■□□ 2.07
Sim2Q61079 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sim2Q61079 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Sim2Q61079 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.92■■■□□ 2.06
Sim2Q61079 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sim2Q61079 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Sim2Q61079 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Sim2Q61079 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms