Protein–RNA interactions for Protein: Q8BGI7

Lrrc39, Leucine-rich repeat-containing protein 39, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc39Q8BGI7 Gm25239-201ENSMUST00000174915 86 ntBASIC32.13■■■□□ 2.73
Lrrc39Q8BGI7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Lrrc39Q8BGI7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Lrrc39Q8BGI7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Lrrc39Q8BGI7 Psd-208ENSMUST00000224556 2034 ntBASIC29.49■■■□□ 2.31
Lrrc39Q8BGI7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Lrrc39Q8BGI7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Lrrc39Q8BGI7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Lrrc39Q8BGI7 Gm15042-201ENSMUST00000120212 883 ntBASIC28.87■■■□□ 2.21
Lrrc39Q8BGI7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Lrrc39Q8BGI7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Lrrc39Q8BGI7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Lrrc39Q8BGI7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Lrrc39Q8BGI7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.38■■■□□ 2.13
Lrrc39Q8BGI7 Gm15045-201ENSMUST00000117359 883 ntBASIC28.35■■■□□ 2.13
Lrrc39Q8BGI7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Lrrc39Q8BGI7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Lrrc39Q8BGI7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Lrrc39Q8BGI7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Lrrc39Q8BGI7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Lrrc39Q8BGI7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Lrrc39Q8BGI7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Lrrc39Q8BGI7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Lrrc39Q8BGI7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.59■■■□□ 2.01
Lrrc39Q8BGI7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Lrrc39Q8BGI7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Lrrc39Q8BGI7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Lrrc39Q8BGI7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Lrrc39Q8BGI7 Gm24109-201ENSMUST00000175489 103 ntBASIC27.49■■□□□ 1.99
Lrrc39Q8BGI7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.41■■□□□ 1.98
Lrrc39Q8BGI7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Lrrc39Q8BGI7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Lrrc39Q8BGI7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Lrrc39Q8BGI7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Lrrc39Q8BGI7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Lrrc39Q8BGI7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Lrrc39Q8BGI7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Lrrc39Q8BGI7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.04■■□□□ 1.92
Lrrc39Q8BGI7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Lrrc39Q8BGI7 Gm23366-201ENSMUST00000175022 89 ntBASIC26.98■■□□□ 1.91
Lrrc39Q8BGI7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.97■■□□□ 1.91
Lrrc39Q8BGI7 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.92■■□□□ 1.9
Lrrc39Q8BGI7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Lrrc39Q8BGI7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Lrrc39Q8BGI7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Lrrc39Q8BGI7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Lrrc39Q8BGI7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Lrrc39Q8BGI7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Lrrc39Q8BGI7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Lrrc39Q8BGI7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Lrrc39Q8BGI7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.48■■□□□ 1.83
Lrrc39Q8BGI7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Lrrc39Q8BGI7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.28■■□□□ 1.8
Lrrc39Q8BGI7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Lrrc39Q8BGI7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Lrrc39Q8BGI7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.18■■□□□ 1.78
Lrrc39Q8BGI7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Lrrc39Q8BGI7 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.14■■□□□ 1.77
Lrrc39Q8BGI7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Lrrc39Q8BGI7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Lrrc39Q8BGI7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
Lrrc39Q8BGI7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Lrrc39Q8BGI7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lrrc39Q8BGI7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lrrc39Q8BGI7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Lrrc39Q8BGI7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Lrrc39Q8BGI7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Lrrc39Q8BGI7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Lrrc39Q8BGI7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Lrrc39Q8BGI7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
Lrrc39Q8BGI7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Lrrc39Q8BGI7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Lrrc39Q8BGI7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Lrrc39Q8BGI7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Lrrc39Q8BGI7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Lrrc39Q8BGI7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Lrrc39Q8BGI7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.58■■□□□ 1.69
Lrrc39Q8BGI7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Lrrc39Q8BGI7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Lrrc39Q8BGI7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Lrrc39Q8BGI7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Lrrc39Q8BGI7 Gm27325-201ENSMUST00000175467 74 ntBASIC25.44■■□□□ 1.66
Lrrc39Q8BGI7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lrrc39Q8BGI7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Lrrc39Q8BGI7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Lrrc39Q8BGI7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Lrrc39Q8BGI7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Lrrc39Q8BGI7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Lrrc39Q8BGI7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Lrrc39Q8BGI7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.31■■□□□ 1.64
Lrrc39Q8BGI7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lrrc39Q8BGI7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Lrrc39Q8BGI7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Lrrc39Q8BGI7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Lrrc39Q8BGI7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lrrc39Q8BGI7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Lrrc39Q8BGI7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Lrrc39Q8BGI7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.14■■□□□ 1.61
Lrrc39Q8BGI7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lrrc39Q8BGI7 Gm25238-201ENSMUST00000174914 89 ntBASIC25.09■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms