RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ULK1O75385 1050 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 UPK1BO75841 260 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 OR4F21O95013 312 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 KRT75O95678 551 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 KRT6AP02538 564 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 KRT6BP04259 564 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 KRT8P05787 483 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 FAM157CP0CG43 387 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 POU2F1P14859 743 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 PPP3CBP16298 524 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF16P17020 682 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 NAGAP17050 411 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 TSPAN8P19075 237 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 CPN2P22792 545 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 PPIBP23284 216 aaKnown RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 IGFBP5P24593 272 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 CERS1P27544 350 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 SOX6P35712 828 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 CASP3P42574 277 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 MAGEA2P43356 314 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 YAP1P46937 504 aaKnown RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 KCNJ5P48544 419 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 KRT6CP48668 564 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 CLK1P49759 484 aaKnown RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 NEK2P51955 445 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 GP2P55259 537 aaKnown RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 COPZ1P61923 177 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 SLC35A2P78381 396 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 PRKCDQ05655 676 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 KRTAP1-1Q07627 177 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 FUT7Q11130 342 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 LAPTM5Q13571 262 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 GTF2H2Q13888 395 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 FGFBP1Q14512 234 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF267Q14586 743 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 KIAA0040Q15053 153 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 IMPG1Q17R60 797 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF404Q494X3 552 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 TIGD2Q4W5G0 525 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 TMEM35AQ53FP2 167 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 EIPR1Q53HC9 387 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 BEX5Q5H9J7 111 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 LRIF1Q5T3J3 769 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 FNDC7Q5VTL7 733 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 HLA-DQA1Q5Y7H0 255 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 THOC7Q6I9Y2 204 aaKnown RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 SLC30A6Q6NXT4 461 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 GTF2H2CQ6P1K8 395 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 SLC2A7Q6PXP3 512 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 RPS27LQ71UM5 84 aaKnown RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 CHMP1BQ7LBR1 199 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 PAGE2Q7Z2X7 111 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 NUP54Q7Z3B4 507 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 PIWIL3Q7Z3Z3 882 aaKnown RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 AKAP14Q86UN6 197 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 CALHM3Q86XJ0 350 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 CADM3Q8N126 398 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 TCAIMQ8N3R3 496 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF611Q8N823 705 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ACOT4Q8N9L9 421 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF540Q8NDQ6 660 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 MCFD2Q8NI22 146 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 SETD6Q8TBK2 473 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 FIG4Q92562 907 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 GTF2H4Q92759 462 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 EXT2Q93063 718 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 TRIM63Q969Q1 353 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 STARD4Q96DR4 205 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF300Q96RE9 604 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 MBOAT4Q96T53 435 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 EGFL8Q99944 293 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 MAPKAP1Q9BPZ7 522 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 DGCR6LQ9BY27 220 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ITPAQ9BY32 194 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 AMBRA1Q9C0C7 1298 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 OR2B2Q9GZK3 357 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 NXF2Q9GZY0 626 aaKnown RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 FANCFQ9NPI8 374 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 C1orf109Q9NX04 203 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 KLHL28Q9NXS3 571 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 CRNNQ9UBG3 495 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF229Q9UJW7 825 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 OSGIN1Q9UJX0 560 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 CDC42EP3Q9UKI2 254 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF490Q9ULM2 529 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 EXO1Q9UQ84 846 aaKnown RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 MRPS18CQ9Y3D5 142 aaKnown RBP5.38□□□□□ -1.55
CPSF7-219ENST00000539952 TIMM22Q9Y584 194 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ANGPTL3Q9Y5C1 460 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 GMPPBQ9Y5P6 360 aa5.38□□□□□ -1.55
CPSF7-219ENST00000539952 ROS1P08922 2347 aa5.37□□□□□ -1.55
CPSF7-219ENST00000539952 KIAA1549Q9HCM3 1950 aa5.37□□□□□ -1.55
CPSF7-219ENST00000539952 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.37□□□□□ -1.55
CPSF7-219ENST00000539952 A0A1W2PNV4 684 aa5.37□□□□□ -1.55
CPSF7-219ENST00000539952 FRG2CA6NGY1 282 aa5.37□□□□□ -1.55
CPSF7-219ENST00000539952 EFCAB9A8MZ26 197 aa5.37□□□□□ -1.55
CPSF7-219ENST00000539952 EIF1AYO14602 144 aaKnown RBP5.37□□□□□ -1.55
CPSF7-219ENST00000539952 GNB5O14775 395 aa5.37□□□□□ -1.55
CPSF7-219ENST00000539952 ANKRD28O15084 1053 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms