RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 PYROXD2Q8N2H3 581 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 GVQW1Q8N7I0 195 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 ZNF614Q8N883 585 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 FBXO25Q8TCJ0 367 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 SCFD1Q8WVM8 642 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 CCDC51Q96ER9 411 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 RMND5BQ96G75 393 aaPredicted RBP4□□□□□ -1.77
SSX2IP-208ENST00000490476 AGAP4Q96P64 663 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 LHX5Q9H2C1 402 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 SLC35D1Q9NTN3 355 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 GDAP2Q9NXN4 497 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 TAS2R16Q9NYV7 291 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 DEC1Q9P2X7 70 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 IKZF3Q9UKT9 509 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 TMCC3Q9ULS5 477 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 SLC9A8Q9Y2E8 581 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 FKBP7Q9Y680 259 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 ABCA13Q86UQ4 5058 aa4□□□□□ -1.77
SSX2IP-208ENST00000490476 TCHHQ07283 1943 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 SCN2AQ99250 2005 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 HERC1Q15751 4861 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 LOC105371242A0A075B767 164 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 TRAV19A0A0A6YYK7 116 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 FAM230AA0A1W2PPH8 454 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 IGLON5A6NGN9 336 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 ANKRD30BLA7E2S9 258 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 ZNF724A8MTY0 619 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 MPTX1A8MV57 137 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 VPS26AO75436 327 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 TOM1L1O75674 476 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 ZFAND5O76080 213 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 GSTA1P08263 222 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 ZNF10P21506 573 aaPredicted RBP3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 HNRNPH3P31942 346 aaKnown RBP3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 NDST1P52848 882 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 CRYBA2P53672 197 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 ATP12AP54707 1039 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 TMEM50BP56557 158 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 HSF2Q03933 536 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 DMTNQ08495 405 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 FUT7Q11130 342 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 RAPSNQ13702 412 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 ZNF235Q14590 738 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 CHRNA6Q15825 494 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 UPP1Q16831 310 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 UNC50Q53HI1 259 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 ARSKQ6UWY0 536 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 CD300LGQ6UXG3 332 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 DPY19L2P2Q6ZN68 376 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 GDPGP1Q6ZNW5 385 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 HPS6Q86YV9 775 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 HIPK1Q86Z02 1210 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 BCORP1Q8N888 145 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 BANPQ8N9N5 519 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 OR1K1Q8NGR3 316 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 NAT6Q93015 286 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 SERAC1Q96JX3 654 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 NSMCE3Q96MG7 304 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 RCHY1Q96PM5 261 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 NDUFAF3Q9BU61 184 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 RBM4Q9BWF3 364 aaKnown RBP3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 TRIM9Q9C026 710 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 FN3KRPQ9HA64 309 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 SGK2Q9HBY8 427 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 PALMDQ9NP74 551 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 NDE1Q9NXR1 346 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 BARHL2Q9NY43 387 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 NUDT4Q9NZJ9 180 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 UBIAD1Q9Y5Z9 338 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 CADP27708 2225 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 CR1P17927 2039 aa3.99□□□□□ -1.77
SSX2IP-208ENST00000490476 A0A087WZY1 265 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 IGHV3-38A0A0C4DH36 116 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 A0A0U1RQV5 110 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 RBMY1BA6NDE4 496 aaKnown RBP3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 RBMY1EA6NEQ0 496 aaKnown RBP3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 FAM47DPA6NHR8 397 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 H3BMH7 237 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 CCL21O00585 134 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 CPLX1O14810 134 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 ARPC1BO15143 372 aaKnown RBP3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 LANCL1O43813 399 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 EDIL3O43854 480 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 RANBP6O60518 1105 aaKnown RBP3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 TSPAN2O60636 221 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 NEBLO76041 1014 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 ERLIN2O94905 339 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 CCNE2O96020 404 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 HPRP00739 348 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 OR4Q2P0C623 313 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 RBMY1DP0C7P1 496 aaKnown RBP3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 ATF6P18850 670 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 MDH1P40925 334 aaKnown RBP3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 SLC1A6P48664 564 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 CRIP2P52943 208 aaPredicted RBP3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 NUCB2P80303 420 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 SRYQ05066 204 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 PDZK1IP1Q13113 114 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 NFATC2Q13469 925 aa3.98□□□□□ -1.77
SSX2IP-208ENST00000490476 FASTKD3Q14CZ7 662 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 205.7 ms