RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 TNRC6BQ9UPQ9 1833 aaKnown RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 IGLV2-18A0A075B6J9 118 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 PSMB11A5LHX3 300 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 OOEPA6NGQ2 149 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 H0Y626 953 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 BET1O15155 118 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 RIPK2O43353 540 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 TRAF3IP2O43734 574 aaPredicted RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 EFNA2O43921 213 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 TRIM16O95361 564 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 ECDO95905 644 aaPredicted RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 IGKV1D-16P01601 117 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 IGHV3-48P01763 117 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 CHRNA1P02708 482 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 CXCL10P02778 98 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 PCCAP05165 728 aaPredicted RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 IGKV4-1P06312 121 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 CCDC192P0DO97 292 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 RCC1P18754 421 aaPredicted RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 MAT2AP31153 395 aaKnown RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 CXCL12P48061 93 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 MNAT1P51948 309 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 CCNA1P78396 465 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 UBXN1Q04323 297 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 BNIP1Q12981 228 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 SRSF6Q13247 344 aaKnown RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 BTG3Q14201 252 aaPredicted RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 RPS6KA1Q15418 735 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 STXBP2Q15833 593 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 STX1AQ16623 288 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 CCDC152Q4G0S7 254 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 KRTAP13-2Q52LG2 175 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 MFSD4BQ5TF39 518 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 ZSCAN25Q6NSZ9 544 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 GET4Q7L5D6 327 aaPredicted RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 TSEN54Q7Z6J9 526 aaKnown RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 C17orf82Q86X59 251 aaPredicted RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 CSNK1A1LQ8N752 337 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 SIDT2Q8NBJ9 832 aaKnown RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 OR4L1Q8NH43 312 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 ACER1Q8TDN7 264 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 FGF14Q92915 247 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 DLX4Q92988 240 aaPredicted RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 GLYATL1Q969I3 302 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 TOP1MTQ969P6 601 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 TEKT1Q969V4 418 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 C5orf30Q96GV9 206 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 INTS14Q96SY0 518 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 CENPOQ9BU64 300 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 NAPBQ9H115 298 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 ABCG8Q9H221 673 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 HEBP1Q9NRV9 189 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 TMEM161AQ9NX61 479 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 CHCHD3Q9NX63 227 aaKnown RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 NKIRAS2Q9NYR9 191 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 VPS54Q9P1Q0 977 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 MARCOQ9UEW3 520 aaPredicted RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 PURGQ9UJV8 347 aaKnown RBP0.97□□□□□ -2.25
LRCH3-209ENST00000452660 EXOC7Q9UPT5 735 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 TTLL3Q9Y4R7 772 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 KNTC1P50748 2209 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 TACC2O95359 2948 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 LOXHD1Q8IVV2 1947 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 CEP192Q8TEP8 1941 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 MEGF8Q7Z7M0 2845 aa0.97□□□□□ -2.25
LRCH3-209ENST00000452660 MGAM2Q2M2H8 2515 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 ROCK2O75116 1388 aaKnown RBP0.96□□□□□ -2.26
LRCH3-209ENST00000452660 FOCADQ5VW36 1801 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 CLSPNQ9HAW4 1339 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 PCDH15Q96QU1 1955 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 WNK1Q9H4A3 2382 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 COL4A2P08572 1712 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 A0A096LNJ9 63 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 IGHV3-64DA0A0J9YX35 117 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 A0A0J9YXY3 114 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 TMX2-CTNND1H3BSU7 103 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 K7ENP7 123 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 PES1O00541 588 aaKnown RBP0.96□□□□□ -2.26
LRCH3-209ENST00000452660 CHEK1O14757 476 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 SH2D1BO14796 132 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 RRP8O43159 456 aaKnown RBP0.96□□□□□ -2.26
LRCH3-209ENST00000452660 NPIPB7O75200 414 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 ZNF254O75437 659 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 RBBP9O75884 186 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 C6orf47O95873 294 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 SLC16A8O95907 504 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 INSP01308 110 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 KRT7P08729 469 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 ZNF286BP0CG31 522 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 HLA-EP13747 358 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 CD99P14209 185 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 BCKDHBP21953 392 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 RDXP35241 583 aaKnown RBP0.96□□□□□ -2.26
LRCH3-209ENST00000452660 TRIM23P36406 574 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 RAD52P43351 418 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 STK19P49842 368 aaPredicted RBP0.96□□□□□ -2.26
LRCH3-209ENST00000452660 LHX2P50458 406 aa0.96□□□□□ -2.26
LRCH3-209ENST00000452660 RPS4XP62701 263 aaKnown RBP0.96□□□□□ -2.26
LRCH3-209ENST00000452660 FKBP1AP62942 108 aaKnown RBP0.96□□□□□ -2.26
LRCH3-209ENST00000452660 NTHL1P78549 312 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms