RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 RAB36O95755 333 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 HMGN1P05114 100 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 F8A1P23610 371 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 CD82P27701 267 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 DLSTP36957 453 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 SLC26A5P58743 744 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 KLHL22Q53GT1 634 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 ALG10BQ5I7T1 473 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 HSDL2Q6YN16 418 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 NANOGP1Q8N7R0 232 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 RNFT2Q96EX2 444 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 VMP1Q96GC9 406 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 GPR87Q9BY21 358 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 HOXD1Q9GZZ0 328 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 ZNF700Q9H0M5 742 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 ASCL3Q9NQ33 180 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 ERGIC3Q9Y282 383 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 SLC35A3Q9Y2D2 325 aa20.69■□□□□ 0.9
CDX1-201ENST00000231656 DCDC2BA2VCK2 349 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 SNTNA6NMZ2 147 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.68■□□□□ 0.9
CDX1-201ENST00000231656 M0R3G1 203 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 HSMCR30P0CW71 290 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 COX6A1P12074 109 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 ADH7P40394 386 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 DCAF7P61962 342 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 RNF4P78317 190 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 MOGQ16653 247 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 HLA-DQA1Q5Y7H0 255 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 ULK3Q6PHR2 472 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 IGF2-ASQ6U949 168 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 ZBTB46Q86UZ6 589 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 CDK20Q8IZL9 346 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 OR13C2Q8NGS9 318 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 OPALINQ96PE5 141 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 MND1Q9BWT6 205 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 TAPBPLQ9BX59 468 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 NRSN2Q9GZP1 204 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 ENKD1Q9H0I2 346 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 UBQLN4Q9NRR5 601 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 SIGLEC7Q9Y286 467 aa20.68■□□□□ 0.9
CDX1-201ENST00000231656 LOC101059948A0A1B0GTJ6 334 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 IRGMA1A4Y4 181 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 BHLHE40O14503 412 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 SOCS6O14544 535 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 NGFRP08138 427 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 TGFBR1P36897 503 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 RAB40BQ12829 278 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 SSPNQ14714 243 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 TSTQ16762 297 aaKnown RBP20.67■□□□□ 0.9
CDX1-201ENST00000231656 TMEM44Q2T9K0 475 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 RPL13AP3Q6NVV1 102 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 CADM2Q8N3J6 435 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 PROKR2Q8NFJ6 384 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 OR11G2Q8NGC1 345 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 NKD1Q969G9 470 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 PLEKHA8Q96JA3 519 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 RACGAP1Q9H0H5 632 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 ASPMQ8IZT6 3477 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 PTP4A3O75365 173 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 RCBTB2O95199 551 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 SLC2A10O95528 541 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 UGT2B10P36537 528 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 PAQR6Q6TCH4 344 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 ATCAYQ86WG3 371 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 ZNF440Q8IYI8 595 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 ZNF441Q8N8Z8 693 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 OR52L1Q8NGH7 329 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 FAM117AQ9C073 453 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 PLGRKTQ9HBL7 147 aa20.67■□□□□ 0.9
CDX1-201ENST00000231656 TRBV11-1A0A0K0K1C0 115 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 A0A1W2PQ72 361 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 CDC14CA4D256 554 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 UTS2O95399 124 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 SCG5P05408 212 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 MTNR1AP48039 350 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 CLK1P49759 484 aaKnown RBP20.66■□□□□ 0.9
CDX1-201ENST00000231656 NR0B1P51843 470 aaKnown RBP20.66■□□□□ 0.9
CDX1-201ENST00000231656 SPHARQ15513 63 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 CD226Q15762 336 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 SSX1Q16384 188 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 THSD4Q6ZMP0 1018 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 PPP1R32Q7Z5V6 425 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 DTX1Q86Y01 620 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 ZNF527Q8NB42 609 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 C17orf47Q8NEP4 570 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 IMMP1LQ96LU5 166 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 OR51E2Q9H255 320 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 RPS6KB2Q9UBS0 482 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 OSGIN1Q9UJX0 560 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 PMF1-BGLAPU3KQ54 211 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 CELSR3Q9NYQ7 3312 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 SPTBN2O15020 2390 aa20.66■□□□□ 0.9
CDX1-201ENST00000231656 CCRL2O00421 344 aa20.65■□□□□ 0.9
CDX1-201ENST00000231656 OIP5O43482 229 aa20.65■□□□□ 0.9
CDX1-201ENST00000231656 SAGP10523 405 aaPredicted RBP20.65■□□□□ 0.9
CDX1-201ENST00000231656 BMP7P18075 431 aa20.65■□□□□ 0.9
CDX1-201ENST00000231656 OTX2P32243 289 aa20.65■□□□□ 0.9
CDX1-201ENST00000231656 ETV1P50549 477 aa20.65■□□□□ 0.9
CDX1-201ENST00000231656 CDH11P55287 796 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms