RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 NADK2Q4G0N4 442 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 CASP12Q6UXS9 341 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 MRGPREQ86SM8 312 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 ATG4DQ86TL0 474 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 BPIFB6Q8NFQ5 453 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 ELOA3Q8NG57 546 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 TRUB1Q8WWH5 349 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 DPH1Q9BZG8 443 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 EGLN3Q9H6Z9 239 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 ATP13A2Q9NQ11 1180 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 SCN3BQ9NY72 215 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 KPNA4O00629 521 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 WBP4O75554 376 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 SERPINA7P05543 415 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 GABRB1P18505 474 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 SOX3P41225 446 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 SSR4P51571 173 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 CDH15P55291 814 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 GABARAPL2P60520 117 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 IGF2-ASQ6U949 168 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 ZNF620Q6ZNG0 422 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 PTCHD4Q6ZW05 846 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 TMPRSS7Q7RTY8 843 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 OR10G3Q8NGC4 313 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 GPR119Q8TDV5 335 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 APH1BQ8WW43 257 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 IP6K3Q96PC2 410 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 TPRKBQ9Y3C4 175 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 CDH10Q9Y6N8 788 aa16.1■□□□□ 0.17
SHKBP1-224ENST00000600718 TRIM64CA6NLI5 447 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 EFCAB9A8MZ26 197 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 NUDT14O95848 222 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 GP1BBP13224 206 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 EEF1B2P24534 225 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 FMO3P31513 532 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 SUMO3P55854 103 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 IL10RAQ13651 578 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 H3F3CQ6NXT2 135 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 SLC27A4Q6P1M0 643 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 DTX1Q86Y01 620 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 P3H2Q8IVL5 708 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 IL22RA1Q8N6P7 574 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 ASB15Q8WXK1 588 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 SECISBP2Q96T21 854 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 TMEM43Q9BTV4 400 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 METTL7AQ9H8H3 244 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 KLRF1Q9NZS2 232 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 AASSQ9UDR5 926 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 SLC30A4O14863 429 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 CDC40O60508 579 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 RCBTB2O95199 551 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 IGF2P01344 180 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 MST1P26927 711 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 MSX1P28360 303 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 SNRPGP62308 76 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 CRYZQ08257 329 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 Q0VFX4 171 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 SNTA1Q13424 505 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 COL28A1Q2UY09 1125 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 RPL13AP3Q6NVV1 102 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 BRIX1Q8TDN6 353 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 KLHDC3Q9BQ90 382 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 TSSK6Q9BXA6 273 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 TEX12Q9BXU0 123 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 PLA2G12AQ9BZM1 189 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 PLCXD1Q9NUJ7 323 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 TBC1D23Q9NUY8 699 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 WDR87Q6ZQQ6 2873 aa16.09■□□□□ 0.17
SHKBP1-224ENST00000600718 ANKUB1A6NFN9 424 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 C17orf51A8MQB3 221 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 GNB5O14775 395 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 SAGP10523 405 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 TACR3P29371 465 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 CASP3P42574 277 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 NR1H2P55055 460 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 FCRLBQ6BAA4 426 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 ACSM5Q6NUN0 579 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 TMEM81Q6P7N7 255 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 IL20RBQ6UXL0 311 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 IQCF1Q8N6M8 205 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 OR8D4Q8NGM9 314 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 ADAMTS17Q8TE56 1095 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 ZNF524Q96C55 264 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 SGTBQ96EQ0 304 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 PRRG3Q9BZD7 231 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 GALNT9Q9HCQ5 603 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 CLN6Q9NWW5 311 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 TAS2R10Q9NYW0 307 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 PCDHGB6Q9Y5F9 930 aa16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 MRPS18BQ9Y676 258 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-224ENST00000600718 IGLV3-32A0A0A0MS00 114 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 MASP2O00187 686 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 GMFGO60234 142 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 MAN1A2O60476 641 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 PFDN1O60925 122 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 PTGDSP41222 190 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 QPRTQ15274 297 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 TOMM34Q15785 309 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 ZNF773Q6PK81 442 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 CCDC103Q8IW40 242 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms