RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 BPIFA2Q96DR5 249 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 ADOQ96SZ5 270 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 CTRCQ99895 268 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 ENKD1Q9H0I2 346 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 UBQLN4Q9NRR5 601 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 MED31Q9Y3C7 131 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 RPL36Q9Y3U8 105 aaKnown RBP8.64□□□□□ -1.03
LINC00838-201ENST00000562956 PCDHGA3Q9Y5H0 932 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 SYNDIG1LA6NDD5 238 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 GNB5O14775 395 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 SURF4O15260 269 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 OIP5O43482 229 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 GABARAPO95166 117 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 SYPP08247 313 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 TBXA2RP21731 343 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 S100A1P23297 94 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 NR0B1P51843 470 aaKnown RBP8.64□□□□□ -1.03
LINC00838-201ENST00000562956 RPS3AP61247 264 aaKnown RBP8.64□□□□□ -1.03
LINC00838-201ENST00000562956 DCDP81605 110 aaKnown RBP8.64□□□□□ -1.03
LINC00838-201ENST00000562956 TIGD6Q17RP2 521 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 LCN10Q6JVE6 187 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 PPP1R3BQ86XI6 285 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 PSD4Q8NDX1 1056 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 SLC38A2Q96QD8 506 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 OR5M11Q96RB7 305 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF426Q9BUY5 554 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 WWTR1Q9GZV5 400 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 HHATLQ9HCP6 504 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 COPS7AQ9UBW8 275 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 ITGB1BP2Q9UKP3 347 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 CFAP54Q96N23 3096 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 IDSB3KWA1 339 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 D6RAR5 112 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 SLC2A10O95528 541 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 HPGDP15428 266 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 CD36P16671 472 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 CTBP2P56545 445 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 ZSWIM7Q19AV6 140 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 PGGHGQ32M88 737 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 MEDAGQ5VYS4 303 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF385CQ66K41 422 aaPredicted RBP8.64□□□□□ -1.03
LINC00838-201ENST00000562956 LINC00114Q6XXX2 140 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 TMPRSS11FQ6ZWK6 438 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 P2RY8Q86VZ1 359 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 CLDN22Q8N7P3 220 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 OR13C2Q8NGS9 318 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 WDR36Q8NI36 951 aaKnown RBP8.64□□□□□ -1.03
LINC00838-201ENST00000562956 FANK1Q8TC84 345 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 BRIX1Q8TDN6 353 aaKnown RBP8.64□□□□□ -1.03
LINC00838-201ENST00000562956 HTRA1Q92743 480 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 RPL3LQ92901 407 aaKnown RBP8.64□□□□□ -1.03
LINC00838-201ENST00000562956 ART5Q96L15 291 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 HS6ST2Q96MM7 605 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 RTN4RQ9BZR6 473 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 OR52D1Q9H346 318 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 UBQLN3Q9H347 655 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 CLEC2DQ9UHP7 191 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF229Q9UJW7 825 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 SLC35A3Q9Y2D2 325 aa8.64□□□□□ -1.03
LINC00838-201ENST00000562956 EFCAB7A8K855 629 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 NTN3O00634 580 aaPredicted RBP8.63□□□□□ -1.03
LINC00838-201ENST00000562956 SCDO00767 359 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 ICOSLGO75144 302 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 REM1O75628 298 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 HEXBP07686 556 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 SAGP10523 405 aaPredicted RBP8.63□□□□□ -1.03
LINC00838-201ENST00000562956 NAT1P18440 290 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 GPR143P51810 404 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 ULK3Q6PHR2 472 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 CBLN3Q6UW01 205 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 ANKRD37Q7Z713 158 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF527Q8NB42 609 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 FAM71CQ8NEG0 241 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 C7orf57Q8NEG2 295 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 OR2T33Q8NG76 320 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 TMEM80Q96HE8 168 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 HOXD1Q9GZZ0 328 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 ARRDC1-AS1Q9H2J1 176 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 RPS6KB2Q9UBS0 482 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 CARD8Q9Y2G2 431 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 FER1L5A0AVI2 2057 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 TRAV27A0A087WT01 109 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 FAM47E-STBD1D6RA91 191 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 CLPXO76031 633 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 APOL3O95236 402 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 HSMCR30P0CW71 290 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 UBL4AP11441 157 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 ADH7P40394 386 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 RBM34P42696 430 aaKnown RBP8.63□□□□□ -1.03
LINC00838-201ENST00000562956 VBP1P61758 197 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 DCAF7P61962 342 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 IFITM3Q01628 133 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 SKP2Q13309 424 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 NCF4Q15080 339 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 ANGPT1Q15389 498 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 HLA-DQA1Q5Y7H0 255 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 THSD4Q6ZMP0 1018 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 SLC29A4Q7RTT9 530 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 BMP8AQ7Z5Y6 402 aa8.63□□□□□ -1.03
LINC00838-201ENST00000562956 CDK20Q8IZL9 346 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms