RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 SPRR3Q9UBC9 169 aa9.83□□□□□ -0.84
ATG4B-219ENST00000479941 SLC5A6Q9Y289 635 aa9.83□□□□□ -0.84
ATG4B-219ENST00000479941 SLC35A3Q9Y2D2 325 aa9.83□□□□□ -0.84
ATG4B-219ENST00000479941 CARD8Q9Y2G2 431 aa9.83□□□□□ -0.84
ATG4B-219ENST00000479941 SLC6A5Q9Y345 797 aa9.83□□□□□ -0.84
ATG4B-219ENST00000479941 L3MBTL1Q9Y468 752 aa9.83□□□□□ -0.84
ATG4B-219ENST00000479941 DOPEY1Q5JWR5 2465 aa9.83□□□□□ -0.84
ATG4B-219ENST00000479941 DSPPQ9NZW4 1301 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 NCKAP5O14513 1909 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 FREM3P0C091 2139 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 BAHCC1Q9P281 2608 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 CENPVL1A0A0U1RR11 272 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 FIGNL2A6NMB9 653 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 ZNHIT1O43257 154 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 LRRTM2O43300 516 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 DCTN3O75935 186 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 CSTAP01040 98 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 IL7RP16871 459 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 BMP7P18075 431 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 SLC6A2P23975 617 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 CHMP24386 653 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 PRDX6P30041 224 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF41P51814 821 aaPredicted RBP9.82□□□□□ -0.84
ATG4B-219ENST00000479941 MTPNP58546 118 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 CDK6Q00534 326 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 CRYZQ08257 329 aaKnown RBP9.82□□□□□ -0.84
ATG4B-219ENST00000479941 RBBP4Q09028 425 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 CAPRIN1Q14444 709 aaKnown RBP9.82□□□□□ -0.84
ATG4B-219ENST00000479941 ZSWIM7Q19AV6 140 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 RAET1LQ5VY80 246 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 NANOGP8Q6NSW7 305 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 REEP3Q6NUK4 255 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 MTFR2Q6P444 385 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 CBLN3Q6UW01 205 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 ENPP6Q6UWR7 440 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 DOLPP1Q86YN1 238 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 TREML1Q86YW5 311 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 CMIPQ8IY22 773 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 PEX5LQ8IYB4 626 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 PM20D2Q8IYS1 436 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 C10orf111Q8N326 155 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 POU5F2Q8N7G0 328 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 OR8J3Q8NGG0 315 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 WDR60Q8WVS4 1066 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 MAL2Q969L2 176 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 ZBTB8AQ96BR9 441 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 RCN3Q96D15 328 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 SFXN2Q96NB2 322 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 LRRC37BQ96QE4 947 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 PIGQQ9BRB3 760 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 UGT2B28Q9BY64 529 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 PRDM14Q9GZV8 571 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 LAT2Q9GZY6 243 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 QRSL1Q9H0R6 528 aaKnown RBP9.82□□□□□ -0.84
ATG4B-219ENST00000479941 KAT8Q9H7Z6 458 aaKnown RBP9.82□□□□□ -0.84
ATG4B-219ENST00000479941 NANOGQ9H9S0 305 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 EFCAB1Q9HAE3 211 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 CACYBPQ9HB71 228 aaKnown RBP9.82□□□□□ -0.84
ATG4B-219ENST00000479941 TNFRSF10DQ9UBN6 386 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 SH3BGRL2Q9UJC5 107 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 TINAGQ9UJW2 476 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 ICAM5Q9UMF0 924 aa9.82□□□□□ -0.84
ATG4B-219ENST00000479941 RPH3AQ9Y2J0 694 aaPredicted RBP9.82□□□□□ -0.84
ATG4B-219ENST00000479941 C7orf72A4D263 438 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 CLEC18AA5D8T8 446 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 E9PLN8 166 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 FXYD1O00168 92 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 CCL21O00585 134 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 GMFGO60234 142 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 WDR1O75083 606 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 AGFG2O95081 481 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 PGM3O95394 542 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 NUDT14O95848 222 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 THBS1P07996 1170 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 HOXD4P09016 255 aaPredicted RBP9.81□□□□□ -0.84
ATG4B-219ENST00000479941 ESRRAP11474 423 aaPredicted RBP9.81□□□□□ -0.84
ATG4B-219ENST00000479941 NID1P14543 1247 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 GABRA1P14867 456 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 ETS2P15036 469 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF17P17021 662 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 RPS4Y1P22090 263 aaKnown RBP9.81□□□□□ -0.84
ATG4B-219ENST00000479941 PTGER4P35408 488 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 PGM1P36871 562 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 EIF1P41567 113 aaKnown RBP9.81□□□□□ -0.84
ATG4B-219ENST00000479941 RNF144AP50876 292 aaPredicted RBP9.81□□□□□ -0.84
ATG4B-219ENST00000479941 PER3P56645 1201 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 SKP2Q13309 424 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 CBFBQ13951 182 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 SCARB2Q14108 478 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 SELPLGQ14242 412 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 SF3B4Q15427 424 aaKnown RBP eCLIP9.81□□□□□ -0.848e-21■■■■■ 47.1
ATG4B-219ENST00000479941 ADRM1Q16186 407 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 BCL2A1Q16548 175 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 CYP51A1Q16850 503 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 LIN52Q52LA3 116 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 EMC4Q5J8M3 183 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 ARSKQ6UWY0 536 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 CLEC18BQ6UXF7 455 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 SERPINA11Q86U17 422 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 FJX1Q86VR8 437 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms