RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 APMAPQ9HDC9 416 aa3.15□□□□□ -1.91
SCAMP1-205ENST00000614488 FANCFQ9NPI8 374 aa3.15□□□□□ -1.91
SCAMP1-205ENST00000614488 CRLS1Q9UJA2 301 aa3.15□□□□□ -1.91
SCAMP1-205ENST00000614488 ARID1AO14497 2285 aa3.15□□□□□ -1.91
SCAMP1-205ENST00000614488 PARD3Q8TEW0 1356 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 CCDC7Q96M83 1385 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 TUBAL3A6NHL2 446 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 GSTT2P0CG29 244 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 GSTT2BP0CG30 244 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 CCDC192P0DO97 292 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 RPS2P15880 293 aaKnown RBP3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 HSPA1LP34931 641 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 DAZ2Q13117 558 aaKnown RBP3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 AGBL2Q5U5Z8 902 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 IRGCQ6NXR0 463 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 DCAF4L2Q8NA75 395 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 MINDY2Q8NBR6 621 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 ZBTB44Q8NCP5 570 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 OR2AP1Q8NGE2 309 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 OR56B1Q8NGI3 324 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 TMEM101Q96IK0 257 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 PPDPFQ9H3Y8 114 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 DAZ3Q9NR90 486 aaKnown RBP3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 ANO10Q9NW15 660 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 FETUBQ9UGM5 382 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 DCDC2Q9UHG0 476 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 CYTH4Q9UIA0 394 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 RAB26Q9ULW5 256 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 SLCO1B1Q9Y6L6 691 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 RLFQ13129 1914 aa3.14□□□□□ -1.91
SCAMP1-205ENST00000614488 PLEKHG1Q9ULL1 1385 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 ARHGAP21Q5T5U3 1957 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 LRRC30A6NM36 301 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 STX11O75558 287 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 ALPPP05187 535 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 ALPPL2P10696 532 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 THRBP10828 461 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 UQCRBP14927 111 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 XRCC1P18887 633 aaPredicted RBP3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 UGT1A5P35504 534 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 NOVA1P51513 510 aaKnown RBP3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 BDH1Q02338 343 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 GAMTQ14353 236 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 SCYL2Q6P3W7 929 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 LPCAT2Q7L5N7 544 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 SNX32Q86XE0 403 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 ZNF433Q8N7K0 673 aaPredicted RBP3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 STKLD1Q8NE28 680 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 FAM71CQ8NEG0 241 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 OR2T33Q8NG76 320 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 PINX1Q96BK5 328 aaKnown RBP3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 POLR3FQ9H1D9 316 aaPredicted RBP3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 ZDHHC11Q9H8X9 412 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 RIMS3Q9UJD0 308 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 KLK12Q9UKR0 248 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 CDH10Q9Y6N8 788 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 UBE4BO95155 1302 aa3.13□□□□□ -1.91
SCAMP1-205ENST00000614488 LOC100131303A0A0U1RQF7 123 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 WASH3PC4AMC7 463 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 EFNA2O43921 213 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 BAG2O95816 211 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 PDHBP11177 359 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 ANXA3P12429 323 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 NUP107P57740 925 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 OSTNP61366 133 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 GABPB1Q06547 395 aaPredicted RBP3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 AP1B1Q10567 949 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 EXOSC2Q13868 293 aaKnown RBP3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 WASH2PQ6VEQ5 465 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 ZNF713Q8N859 430 aaPredicted RBP3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 DCUN1D4Q92564 292 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 SDSLQ96GA7 329 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 SLC30A2Q9BRI3 323 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 CHIAQ9BZP6 476 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 RNF6Q9Y252 685 aa3.12□□□□□ -1.91
SCAMP1-205ENST00000614488 LTBP1Q14766 1721 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 A0A1B0GUA9 196 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 USP27XA6NNY8 438 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 SUPT7LO94864 414 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 ATP5A1P25705 553 aaKnown RBP3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 OAS2P29728 719 aaKnown RBP3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 YBEYP58557 167 aaPredicted RBP3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 ZCCHC12Q6PEW1 402 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 CYS1Q717R9 158 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 LCA5Q86VQ0 697 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 EFCAB13Q8IY85 973 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 KDM8Q8N371 416 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 NRTNQ99748 197 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 SH2D2AQ9NP31 389 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 NANSQ9NR45 359 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 UTP6Q9NYH9 597 aaKnown RBP3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 IFT52Q9Y366 437 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 MAB21L2Q9Y586 359 aa3.11□□□□□ -1.91
SCAMP1-205ENST00000614488 A0A0J9YXY3 114 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 DPP4P27487 766 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 CD1BP29016 333 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 NMT1P30419 496 aaKnown RBP3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 SLC26A5P58743 744 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms