RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 MMACHCQ9Y4U1 282 aa20.94■□□□□ 0.94
CDX1-201ENST00000231656 IGLV3-12A0A075B6K2 115 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 CLDN24A6NM45 220 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 CPSF4LA6NMK7 179 aaKnown RBP20.93■□□□□ 0.94
CDX1-201ENST00000231656 MEN1O00255 615 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 KIAA0513O60268 411 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 SOX14O95416 240 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 RAB15P59190 212 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 ZNF155Q12901 538 aaPredicted RBP20.93■□□□□ 0.94
CDX1-201ENST00000231656 TRAM2Q15035 370 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 GPR68Q15743 365 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 MAPK14Q16539 360 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 MINDY4Q4G0A6 757 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 MFSD4BQ5TF39 518 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 QSOX2Q6ZRP7 698 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 GALNT12Q8IXK2 581 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 SVOPQ8N4V2 548 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 PTCHD1Q96NR3 888 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 ULBP3Q9BZM4 244 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 TGIF2Q9GZN2 237 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 ANKRD19PQ9H560 264 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 CACYBPQ9HB71 228 aaKnown RBP20.93■□□□□ 0.94
CDX1-201ENST00000231656 SLC24A3Q9HC58 644 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 B3GALT1Q9Y5Z6 326 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 CEP250Q9BV73 2442 aa20.93■□□□□ 0.94
CDX1-201ENST00000231656 A0A087WUU8 490 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 GXYLT2A0PJZ3 443 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 PMS2P1A4D2B8 440 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 CCNYL3P0C7X3 344 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 CSRP1P21291 193 aaKnown RBP20.92■□□□□ 0.94
CDX1-201ENST00000231656 GABRA3P34903 492 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 MVKQ03426 396 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 COX10Q12887 443 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 ENTPD8Q5MY95 495 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 DCAF12Q5T6F0 453 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 AP1ARQ63HQ0 302 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 C12orf73Q69YU5 71 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 LAPTM4BQ86VI4 370 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 SLC38A4Q969I6 547 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 FKBP10Q96AY3 582 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 RBM18Q96H35 190 aaKnown RBP20.92■□□□□ 0.94
CDX1-201ENST00000231656 GPA33Q99795 319 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 COPS4Q9BT78 406 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 LMF2Q9BU23 707 aaKnown RBP20.92■□□□□ 0.94
CDX1-201ENST00000231656 KCNE5Q9UJ90 142 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 NTNG1Q9Y2I2 539 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 A0A1W2PNU3 283 aaPredicted RBP20.92■□□□□ 0.94
CDX1-201ENST00000231656 TM4SF5O14894 197 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 MPZL2O60487 215 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 DBIP07108 87 aaKnown RBP20.92■□□□□ 0.94
CDX1-201ENST00000231656 EFNA3P52797 238 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 POU6F2P78424 691 aaPredicted RBP20.92■□□□□ 0.94
CDX1-201ENST00000231656 HOXC5Q00444 222 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 RHAGQ02094 409 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 EIPR1Q53HC9 387 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 PRSS58Q8IYP2 241 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 STT3BQ8TCJ2 826 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 RORBQ92753 470 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 GGHQ92820 318 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 RIT1Q92963 219 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 MCHR1Q99705 422 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 ACOT13Q9NPJ3 140 aa20.92■□□□□ 0.94
CDX1-201ENST00000231656 CCDC187A0A096LP49 1063 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 IGKV3D-11A0A0A0MRZ8 115 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 CLCA1A8K7I4 914 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 AP3D1O14617 1153 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 PLD2O14939 933 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 FADS2O95864 444 aaKnown RBP20.91■□□□□ 0.94
CDX1-201ENST00000231656 JMJD7P0C870 316 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 STT3AP46977 705 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 ZNF136P52737 540 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 NUDT6P53370 316 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 OCA2Q04671 838 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 ST3GAL3Q11203 375 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 BIKQ13323 160 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 EIF3IQ13347 325 aaKnown RBP20.91■□□□□ 0.94
CDX1-201ENST00000231656 SERTAD2Q14140 314 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 SYT6Q5T7P8 510 aaPredicted RBP20.91■□□□□ 0.94
CDX1-201ENST00000231656 LCN10Q6JVE6 187 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 FIGNL1Q6PIW4 674 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 OVCH1Q7RTY7 1134 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 PMM1Q92871 262 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 LRFN5Q96NI6 719 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 DGAT2Q96PD7 388 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 AKIRIN1Q9H9L7 192 aaPredicted RBP20.91■□□□□ 0.94
CDX1-201ENST00000231656 FOLH1BQ9HBA9 442 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 POLE3Q9NRF9 147 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 PISDQ9UG56 409 aa20.91■□□□□ 0.94
CDX1-201ENST00000231656 HRKO00198 91 aa20.9■□□□□ 0.94
CDX1-201ENST00000231656 BRINP1O60477 761 aa20.9■□□□□ 0.94
CDX1-201ENST00000231656 NOL3O60936 208 aaKnown RBP20.9■□□□□ 0.94
CDX1-201ENST00000231656 OR5F1O95221 314 aa20.9■□□□□ 0.94
CDX1-201ENST00000231656 THY1P04216 161 aa20.9■□□□□ 0.94
CDX1-201ENST00000231656 ZGLP1P0C6A0 271 aa20.9■□□□□ 0.94
CDX1-201ENST00000231656 EMDP50402 254 aa20.9■□□□□ 0.94
CDX1-201ENST00000231656 PTCHD4Q6ZW05 846 aa20.9■□□□□ 0.94
CDX1-201ENST00000231656 PLEKHM3Q6ZWE6 761 aa20.9■□□□□ 0.94
CDX1-201ENST00000231656 RAB2BQ8WUD1 216 aa20.9■□□□□ 0.94
CDX1-201ENST00000231656 TSLPQ969D9 159 aa20.9■□□□□ 0.94
CDX1-201ENST00000231656 TAAR9Q96RI9 348 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms