RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gstm7Q80W21 218 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Coro2bQ8BH44 480 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ankrd9Q8BH83 326 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Txnl4bQ8BUH1 149 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 FRRS1Q8K385 592 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cys1Q8R4T1 145 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr61Q8VGM2 311 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 SharpinQ91WA6 380 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Bud23Q9CY21 281 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Loxl3Q9Z175 754 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tcf7l1Q9Z1J1 584 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ttc6G3UYY4 1857 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Aadacl2B2RWD2 401 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm16434J3QN10 205 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 4930555G01RikL7N253 205 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gja4P28235 333 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Kat7Q5SVQ0 613 aaKnown RBP14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Foxd3Q61060 465 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olig3Q6PFG8 273 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Galnt7Q80VA0 657 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Oxa1lQ8BGA9 433 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Itih5Q8BJD1 952 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ebf4Q8K4J2 599 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 FbrsQ8R089 466 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Pcolce2Q8R4W6 414 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ndc1Q8VCB1 673 aaKnown RBP14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 VitQ8VHI5 650 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Timm22Q9CQ85 194 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Fam3bQ9D309 235 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Unc13cQ8K0T7 2210 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Pcdhgb8A0A140LI48 931 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm14744B1AVU4 173 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 TmppeD3Z286 447 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Shisa8J3QNX5 399 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 H2-Eb2Q3UUV9 287 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr1477Q7TQQ7 315 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Carnmt1Q80UY1 400 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Q8BR90 294 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Hpf1Q8CFE2 346 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Q8R2K8 148 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 5430402E10RikQ9D3N5 173 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 NrapQ80XB4 1728 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Catsperg1E9Q355 1151 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 GnptgQ6S5C2 307 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 GanabQ8BHN3 944 aaKnown RBP14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Mrpl38Q8K2M0 380 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr77Q8VEY9 312 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ripply3Q924S9 152 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Snx20Q9D2Y5 313 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Xylt2Q9EPL0 865 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Rhox2dW4VSN9 191 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Kmt2eQ3UG20 1868 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Mgl2A9XX86 381 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Rpl3lE9PWZ3 407 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Vmn1r168K7N6B6 309 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Fam117bQ3U3E2 584 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ugt2b36Q3UEP4 530 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Slc30a10Q3UVU3 470 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Vmn1r87Q8R255 295 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Asb15Q8VHS6 583 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ppil3Q9D6L8 161 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Scamp4Q9JKV5 230 aa14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Hapln1Q9QUP5 356 aaKnown RBP14.69□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Hs3st4D3YVV6 449 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr1513L7N457 313 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Znf354aQ61751 572 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cachd1Q6PDJ1 1288 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Mal2Q8BI08 175 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tssk6Q925K9 273 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm21103E9Q2Q1 267 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Omt2aF6ZJR3 104 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm8356J3QPD3 205 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Bhlhe40O35185 411 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 EdnraQ61614 427 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 PrlhrQ6VMN6 370 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 SnupnQ80W37 358 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gpr176Q80WT4 515 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 DpcdQ8BPA8 203 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ikzf5Q8BU00 419 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Apoa5Q8C7G5 368 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Slc22a12Q8CFZ5 553 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tmem30aQ8VEK0 364 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr868Q8VFI8 309 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Insm2Q9JMC2 493 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cfap77A0A087WRI3 283 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ighg1P01869 393 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 FauP35545 74 aaKnown RBP14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Pan3Q640Q5 837 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Slc49a3Q8CE47 516 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm14692A2BH01 229 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Xkr6E9Q6C8 638 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 FiglaO55208 194 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Hnrnpa2b1O88569 353 aaKnown RBP14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Man2a1P27046 1150 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Etv2P41163 335 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tnfrsf4P47741 272 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ankub1Q3UUE9 192 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Mfsd13aQ6PDE8 519 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr309Q7TS01 308 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 JamlQ80UL9 379 aa14.68□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms