Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Gm25239-201ENSMUST00000174915 86 ntBASIC41.03■■■■■ 4.16
Cachd1Q6PDJ1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
Cachd1Q6PDJ1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Cachd1Q6PDJ1 Gm24109-201ENSMUST00000175489 103 ntBASIC36.31■■■■□ 3.4
Cachd1Q6PDJ1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
Cachd1Q6PDJ1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
Cachd1Q6PDJ1 Gm15042-201ENSMUST00000120212 883 ntBASIC34.64■■■■□ 3.14
Cachd1Q6PDJ1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Cachd1Q6PDJ1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Cachd1Q6PDJ1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Cachd1Q6PDJ1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.22■■■■□ 3.07
Cachd1Q6PDJ1 Gm23366-201ENSMUST00000175022 89 ntBASIC34.19■■■■□ 3.06
Cachd1Q6PDJ1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.1■■■■□ 3.05
Cachd1Q6PDJ1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Cachd1Q6PDJ1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.57■■■□□ 2.96
Cachd1Q6PDJ1 Gm15045-201ENSMUST00000117359 883 ntBASIC33.52■■■□□ 2.96
Cachd1Q6PDJ1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.1■■■□□ 2.89
Cachd1Q6PDJ1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Cachd1Q6PDJ1 Gm25238-201ENSMUST00000174914 89 ntBASIC32.74■■■□□ 2.83
Cachd1Q6PDJ1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Cachd1Q6PDJ1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.5■■■□□ 2.79
Cachd1Q6PDJ1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Cachd1Q6PDJ1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
Cachd1Q6PDJ1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Cachd1Q6PDJ1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
Cachd1Q6PDJ1 Gm25262-201ENSMUST00000174934 133 ntBASIC32.2■■■□□ 2.75
Cachd1Q6PDJ1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
Cachd1Q6PDJ1 Gm26115-201ENSMUST00000175605 87 ntBASIC31.95■■■□□ 2.71
Cachd1Q6PDJ1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.87■■■□□ 2.69
Cachd1Q6PDJ1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.81■■■□□ 2.68
Cachd1Q6PDJ1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.65■■■□□ 2.66
Cachd1Q6PDJ1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Cachd1Q6PDJ1 Gm8109-201ENSMUST00000194076 746 ntBASIC31.48■■■□□ 2.63
Cachd1Q6PDJ1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cachd1Q6PDJ1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
Cachd1Q6PDJ1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cachd1Q6PDJ1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.18■■■□□ 2.58
Cachd1Q6PDJ1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.02■■■□□ 2.56
Cachd1Q6PDJ1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.02■■■□□ 2.56
Cachd1Q6PDJ1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Cachd1Q6PDJ1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cachd1Q6PDJ1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.57■■■□□ 2.48
Cachd1Q6PDJ1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cachd1Q6PDJ1 Rab21-202ENSMUST00000218831 843 ntBASIC30.46■■■□□ 2.47
Cachd1Q6PDJ1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Cachd1Q6PDJ1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Cachd1Q6PDJ1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
Cachd1Q6PDJ1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.32■■■□□ 2.44
Cachd1Q6PDJ1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Cachd1Q6PDJ1 Gm24804-201ENSMUST00000174982 85 ntBASIC30.28■■■□□ 2.44
Cachd1Q6PDJ1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Cachd1Q6PDJ1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.26■■■□□ 2.43
Cachd1Q6PDJ1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cachd1Q6PDJ1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Cachd1Q6PDJ1 Gm27325-201ENSMUST00000175467 74 ntBASIC30.08■■■□□ 2.41
Cachd1Q6PDJ1 Zfp131-205ENSMUST00000223812 663 ntBASIC30.02■■■□□ 2.4
Cachd1Q6PDJ1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.01■■■□□ 2.39
Cachd1Q6PDJ1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cachd1Q6PDJ1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Cachd1Q6PDJ1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Cachd1Q6PDJ1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.86■■■□□ 2.37
Cachd1Q6PDJ1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Cachd1Q6PDJ1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cachd1Q6PDJ1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
Cachd1Q6PDJ1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.77■■■□□ 2.36
Cachd1Q6PDJ1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Cachd1Q6PDJ1 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.66■■■□□ 2.34
Cachd1Q6PDJ1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Cachd1Q6PDJ1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.6■■■□□ 2.33
Cachd1Q6PDJ1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Cachd1Q6PDJ1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Cachd1Q6PDJ1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Cachd1Q6PDJ1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.46■■■□□ 2.31
Cachd1Q6PDJ1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.43■■■□□ 2.3
Cachd1Q6PDJ1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.41■■■□□ 2.3
Cachd1Q6PDJ1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
Cachd1Q6PDJ1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cachd1Q6PDJ1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Cachd1Q6PDJ1 Gm27322-201ENSMUST00000184007 104 ntBASIC29.33■■■□□ 2.29
Cachd1Q6PDJ1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.31■■■□□ 2.28
Cachd1Q6PDJ1 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.3■■■□□ 2.28
Cachd1Q6PDJ1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Cachd1Q6PDJ1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Cachd1Q6PDJ1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Cachd1Q6PDJ1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Cachd1Q6PDJ1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Cachd1Q6PDJ1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Cachd1Q6PDJ1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Cachd1Q6PDJ1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
Cachd1Q6PDJ1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Cachd1Q6PDJ1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cachd1Q6PDJ1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.11■■■□□ 2.25
Cachd1Q6PDJ1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Cachd1Q6PDJ1 Psd-208ENSMUST00000224556 2034 ntBASIC29.09■■■□□ 2.25
Cachd1Q6PDJ1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
Cachd1Q6PDJ1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.03■■■□□ 2.24
Cachd1Q6PDJ1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Cachd1Q6PDJ1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Cachd1Q6PDJ1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.95■■■□□ 2.22
Cachd1Q6PDJ1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms