RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	ADE8	P04161	214 aa		4.8	□□□□□ -1.64
RSA1	YPL193W	MET3	P08536	511 aa		4.8	□□□□□ -1.64
RSA1	YPL193W	RFA1	P22336	621 aa	Known RBP	4.8	□□□□□ -1.64
RSA1	YPL193W	CTF13	P35203	478 aa		4.8	□□□□□ -1.64
RSA1	YPL193W	ELO3	P40319	345 aa		4.8	□□□□□ -1.64
RSA1	YPL193W	SDP1	P40479	209 aa		4.8	□□□□□ -1.64
RSA1	YPL193W	SDS3	P40505	327 aa		4.8	□□□□□ -1.64
RSA1	YPL193W	CEP3	P40969	608 aa		4.8	□□□□□ -1.64
RSA1	YPL193W	DLT1	Q04216	342 aa		4.8	□□□□□ -1.64
RSA1	YPL193W	MRH1	Q12117	320 aa	Predicted RBP	4.8	□□□□□ -1.64
RSA1	YPL193W	KOG1	P38873	1557 aa		4.79	□□□□□ -1.64
RSA1	YPL193W	AFR1	P33304	620 aa		4.79	□□□□□ -1.64
RSA1	YPL193W	YKL069W	P36088	180 aa		4.79	□□□□□ -1.64
RSA1	YPL193W	ERT1	P38140	529 aa		4.79	□□□□□ -1.64
RSA1	YPL193W	YKE2	P52553	114 aa		4.79	□□□□□ -1.64
RSA1	YPL193W	MAD1	P40957	749 aa		4.78	□□□□□ -1.64
RSA1	YPL193W	FKH2	P41813	862 aa		4.78	□□□□□ -1.64
RSA1	YPL193W	FBP1	P09201	348 aa		4.77	□□□□□ -1.65
RSA1	YPL193W	TUB3	P09734	445 aa	Known RBP	4.77	□□□□□ -1.65
RSA1	YPL193W	CAF20	P12962	161 aa	Known RBP	4.77	□□□□□ -1.65
RSA1	YPL193W	CLN2	P20438	545 aa		4.77	□□□□□ -1.65
RSA1	YPL193W	OPI10	Q08202	246 aa		4.77	□□□□□ -1.65
RSA1	YPL193W	TRM11	Q12463	433 aa		4.77	□□□□□ -1.65
RSA1	YPL193W	TYE7	P33122	291 aa	Predicted RBP	4.76	□□□□□ -1.65
RSA1	YPL193W	YBR238C	P38330	731 aa	Known RBP	4.76	□□□□□ -1.65
RSA1	YPL193W	YHL017W	P38745	532 aa		4.76	□□□□□ -1.65
RSA1	YPL193W	DAS1	P47005	663 aa		4.76	□□□□□ -1.65
RSA1	YPL193W	SHE9	Q04172	456 aa		4.76	□□□□□ -1.65
RSA1	YPL193W	PPZ2	P33329	710 aa		4.75	□□□□□ -1.65
RSA1	YPL193W	TDP1	P38319	544 aa		4.75	□□□□□ -1.65
RSA1	YPL193W	RPP1	P38786	293 aa		4.75	□□□□□ -1.65
RSA1	YPL193W	MUP1	P50276	574 aa		4.75	□□□□□ -1.65
RSA1	YPL193W	MRPS35	P53292	345 aa		4.75	□□□□□ -1.65
RSA1	YPL193W	YKR011C	Q02209	353 aa		4.75	□□□□□ -1.65
RSA1	YPL193W	VPS16	Q03308	798 aa		4.75	□□□□□ -1.65
RSA1	YPL193W	CRR1	Q05790	422 aa		4.75	□□□□□ -1.65
RSA1	YPL193W	ADY4	Q05955	493 aa		4.75	□□□□□ -1.65
RSA1	YPL193W	SUT2	Q12286	268 aa		4.75	□□□□□ -1.65
RSA1	YPL193W	CTF8	P38877	133 aa		4.74	□□□□□ -1.65
RSA1	YPL193W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
RSA1	YPL193W	NDJ1	Q12366	352 aa		4.74	□□□□□ -1.65
RSA1	YPL193W	BNR1	P40450	1375 aa		4.73	□□□□□ -1.65
RSA1	YPL193W	RPS9A	O13516	197 aa	Known RBP	4.72	□□□□□ -1.65
RSA1	YPL193W	PRP4	P20053	465 aa	Known RBP	4.72	□□□□□ -1.65
RSA1	YPL193W	PCL5	P38794	229 aa		4.72	□□□□□ -1.65
RSA1	YPL193W	YHR078W	P38799	552 aa		4.72	□□□□□ -1.65
RSA1	YPL193W	VHR1	P40522	640 aa		4.72	□□□□□ -1.65
RSA1	YPL193W	TPO2	P53283	614 aa		4.72	□□□□□ -1.65
RSA1	YPL193W	HDA1	P53973	706 aa		4.72	□□□□□ -1.65
RSA1	YPL193W	JIP5	Q06214	492 aa	Predicted RBP	4.72	□□□□□ -1.65
RSA1	YPL193W	PIN2	Q12057	282 aa		4.72	□□□□□ -1.65
RSA1	YPL193W	URA1	P28272	314 aa	Predicted RBP	4.71	□□□□□ -1.66
RSA1	YPL193W	TOK1	P40310	691 aa		4.71	□□□□□ -1.66
RSA1	YPL193W	CCM1	P48237	864 aa	Predicted RBP	4.71	□□□□□ -1.66
RSA1	YPL193W	PUS2	P53167	370 aa		4.71	□□□□□ -1.66
RSA1	YPL193W	TY1B-DR4	Q07793	1604 aa		4.71	□□□□□ -1.66
RSA1	YPL193W	GFA1	P14742	717 aa	Known RBP	4.7	□□□□□ -1.66
RSA1	YPL193W	MDM10	P18409	493 aa		4.7	□□□□□ -1.66
RSA1	YPL193W	MRP8	P35719	219 aa		4.7	□□□□□ -1.66
RSA1	YPL193W	PBY1	P38254	753 aa		4.7	□□□□□ -1.66
RSA1	YPL193W	SIT1	P39980	628 aa		4.7	□□□□□ -1.66
RSA1	YPL193W	YBR284W	P38150	797 aa		4.69	□□□□□ -1.66
RSA1	YPL193W	RIX1	P38883	763 aa	Predicted RBP	4.69	□□□□□ -1.66
RSA1	YPL193W	YJL163C	P46996	555 aa		4.69	□□□□□ -1.66
RSA1	YPL193W	LCD1	Q04377	747 aa		4.69	□□□□□ -1.66
RSA1	YPL193W	YPR071W	Q12346	211 aa		4.69	□□□□□ -1.66
RSA1	YPL193W	CDC43	P18898	376 aa		4.68	□□□□□ -1.66
RSA1	YPL193W	REC104	P33323	182 aa		4.68	□□□□□ -1.66
RSA1	YPL193W	YBR053C	P38235	358 aa		4.68	□□□□□ -1.66
RSA1	YPL193W	VPS73	P53142	486 aa	Known RBP	4.68	□□□□□ -1.66
RSA1	YPL193W	PKH1	Q03407	766 aa		4.68	□□□□□ -1.66
RSA1	YPL193W	KIN3	P22209	435 aa		4.67	□□□□□ -1.66
RSA1	YPL193W	STE5	P32917	917 aa		4.67	□□□□□ -1.66
RSA1	YPL193W	IRR1	P40541	1150 aa		4.67	□□□□□ -1.66
RSA1	YPL193W	TAH11	P47112	604 aa		4.67	□□□□□ -1.66
RSA1	YPL193W	BUL2	Q03758	920 aa	Known RBP	4.67	□□□□□ -1.66
RSA1	YPL193W	MET6	P05694	767 aa	Known RBP	4.66	□□□□□ -1.66
RSA1	YPL193W	HCA4	P20448	770 aa	Known RBP	4.66	□□□□□ -1.66
RSA1	YPL193W	HBS1	P32769	611 aa	Known RBP	4.66	□□□□□ -1.66
RSA1	YPL193W	ASI2	P53895	289 aa		4.66	□□□□□ -1.66
RSA1	YPL193W	IRC13	Q08630	104 aa		4.66	□□□□□ -1.66
RSA1	YPL193W	TUB1	P09733	447 aa	Known RBP	4.65	□□□□□ -1.67
RSA1	YPL193W	HIS7	P33734	552 aa	Known RBP	4.65	□□□□□ -1.67
RSA1	YPL193W	CBR1	P38626	284 aa	Known RBP	4.65	□□□□□ -1.67
RSA1	YPL193W	VAC8	P39968	578 aa		4.65	□□□□□ -1.67
RSA1	YPL193W	IMO32	P53219	342 aa		4.65	□□□□□ -1.67
RSA1	YPL193W	DUS1	P53759	423 aa	Known RBP	4.65	□□□□□ -1.67
RSA1	YPL193W	HAL9	Q12180	1030 aa		4.65	□□□□□ -1.67
RSA1	YPL193W	NAP1	P25293	417 aa	Known RBP	4.64	□□□□□ -1.67
RSA1	YPL193W	CYS3	P31373	394 aa	Known RBP	4.64	□□□□□ -1.67
RSA1	YPL193W	FLO10	P36170	1169 aa		4.64	□□□□□ -1.67
RSA1	YPL193W	YBR184W	P38299	523 aa		4.64	□□□□□ -1.67
RSA1	YPL193W	SAK1	P38990	1142 aa		4.64	□□□□□ -1.67
RSA1	YPL193W	PZF1	P39933	429 aa		4.64	□□□□□ -1.67
RSA1	YPL193W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
RSA1	YPL193W	AMA1	P50082	593 aa		4.64	□□□□□ -1.67
RSA1	YPL193W	RIA1	P53893	1110 aa		4.64	□□□□□ -1.67
RSA1	YPL193W	AFT2	Q08957	416 aa		4.64	□□□□□ -1.67
RSA1	YPL193W	PRP9	P19736	530 aa	Known RBP	4.63	□□□□□ -1.67
RSA1	YPL193W	GGA2	P38817	585 aa	Known RBP	4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms