RNA–Protein interactions for RNA: YPL120W

VPS30, Transcript of Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II, yeast

Gene VPS30, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS30	YPL120W	RAD27	P26793	382 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	MXR1	P40029	184 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	POL32	P47110	350 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	VPS62	P53285	467 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	YLR224W	Q05947	369 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	NTO1	Q12311	748 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	TAD3	Q9URQ3	322 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	TOP1	P04786	769 aa		4.82	□□□□□ -1.64
VPS30	YPL120W	MSC2	Q03455	724 aa		4.82	□□□□□ -1.64
VPS30	YPL120W	SUN4	P53616	420 aa		4.81	□□□□□ -1.64
VPS30	YPL120W	ACM1	Q08981	209 aa		4.81	□□□□□ -1.64
VPS30	YPL120W	HMI1	Q12039	706 aa		4.81	□□□□□ -1.64
VPS30	YPL120W	YLR419W	Q06698	1435 aa	Known RBP	4.81	□□□□□ -1.64
VPS30	YPL120W	FBP1	P09201	348 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	ACE2	P21192	770 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	PMI40	P29952	429 aa	Known RBP	4.8	□□□□□ -1.64
VPS30	YPL120W	RER2	P35196	286 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	SHC1	P39000	512 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	AIM21	P40563	679 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	PHO23	P50947	330 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	TIF35	Q04067	274 aa	Known RBP	4.8	□□□□□ -1.64
VPS30	YPL120W	SPR28	Q04921	423 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	GNT1	Q12096	491 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	VPS13	Q07878	3144 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	BI4	P03879	638 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	RPL11A	P0C0W9	174 aa	Known RBP	4.8	□□□□□ -1.64
VPS30	YPL120W	PEP7	P32609	515 aa		4.8	□□□□□ -1.64
VPS30	YPL120W	RPL11B	Q3E757	174 aa	Predicted RBP	4.8	□□□□□ -1.64
VPS30	YPL120W	RIX7	Q07844	837 aa	Known RBP	4.79	□□□□□ -1.64
VPS30	YPL120W	NOP12	Q08208	459 aa	Known RBP	4.79	□□□□□ -1.64
VPS30	YPL120W	RTT10	Q08924	1013 aa		4.79	□□□□□ -1.64
VPS30	YPL120W	GEM1	P39722	662 aa		4.78	□□□□□ -1.64
VPS30	YPL120W	SLI1	P53304	468 aa		4.78	□□□□□ -1.64
VPS30	YPL120W	ESF1	Q06344	628 aa	Known RBP	4.78	□□□□□ -1.64
VPS30	YPL120W	SPP382	Q06411	708 aa	Predicted RBP	4.78	□□□□□ -1.64
VPS30	YPL120W	ATE1	P16639	503 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	DBP2	P24783	546 aa	Known RBP	4.77	□□□□□ -1.65
VPS30	YPL120W	PLB1	P39105	664 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	HFM1	P51979	1187 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	PMA1	P05030	918 aa	Known RBP	4.77	□□□□□ -1.65
VPS30	YPL120W	ENA1	P13587	1091 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	POA1	P38218	177 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	PFF1	P38244	976 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	PEA2	P40091	420 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	FYV10	P40492	516 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	MND2	P40577	368 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	ENA2	Q01896	1091 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	TPO1	Q07824	586 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	ENA5	Q12691	1091 aa		4.77	□□□□□ -1.65
VPS30	YPL120W	RAV1	P47104	1357 aa		4.76	□□□□□ -1.65
VPS30	YPL120W	SLA2	P33338	968 aa		4.76	□□□□□ -1.65
VPS30	YPL120W	ZRG8	P40021	1076 aa		4.76	□□□□□ -1.65
VPS30	YPL120W	YJR107W	P47145	328 aa		4.76	□□□□□ -1.65
VPS30	YPL120W	CTF4	Q01454	927 aa		4.76	□□□□□ -1.65
VPS30	YPL120W	TMA46	Q12000	345 aa	Known RBP	4.76	□□□□□ -1.65
VPS30	YPL120W	DCG1	P32460	244 aa		4.75	□□□□□ -1.65
VPS30	YPL120W	PPH3	P32345	308 aa		4.74	□□□□□ -1.65
VPS30	YPL120W	SIP5	P40210	489 aa	Known RBP	4.74	□□□□□ -1.65
VPS30	YPL120W	RIM15	P43565	1770 aa		4.74	□□□□□ -1.65
VPS30	YPL120W	GRX1	P25373	110 aa	Known RBP	4.73	□□□□□ -1.65
VPS30	YPL120W	ICL1	P28240	557 aa	Predicted RBP	4.73	□□□□□ -1.65
VPS30	YPL120W	MOT2	P34909	587 aa	Known RBP	4.73	□□□□□ -1.65
VPS30	YPL120W	PNT1	P38969	423 aa		4.73	□□□□□ -1.65
VPS30	YPL120W	MET12	P46151	657 aa		4.73	□□□□□ -1.65
VPS30	YPL120W	TAO3	P40468	2376 aa		4.73	□□□□□ -1.65
VPS30	YPL120W	SMY1	P32364	656 aa	Known RBP	4.73	□□□□□ -1.65
VPS30	YPL120W	DEF1	P35732	738 aa	Known RBP	4.73	□□□□□ -1.65
VPS30	YPL120W	MSS4	P38994	779 aa		4.73	□□□□□ -1.65
VPS30	YPL120W	IOC3	P43596	787 aa		4.73	□□□□□ -1.65
VPS30	YPL120W	HIS5	P07172	385 aa		4.72	□□□□□ -1.65
VPS30	YPL120W	LYP1	P32487	611 aa		4.72	□□□□□ -1.65
VPS30	YPL120W	CHS7	P38843	316 aa		4.72	□□□□□ -1.65
VPS30	YPL120W	TIM50	Q02776	476 aa		4.72	□□□□□ -1.65
VPS30	YPL120W	ADY3	Q07732	790 aa		4.72	□□□□□ -1.65
VPS30	YPL120W	XYL2	Q07993	356 aa		4.72	□□□□□ -1.65
VPS30	YPL120W	OSW2	Q12202	724 aa		4.72	□□□□□ -1.65
VPS30	YPL120W	FIG2	P25653	1609 aa		4.71	□□□□□ -1.66
VPS30	YPL120W	TRP2	P00899	507 aa	Known RBP	4.71	□□□□□ -1.66
VPS30	YPL120W	RPP2A	P05319	106 aa	Known RBP	4.71	□□□□□ -1.66
VPS30	YPL120W	INO1	P11986	533 aa		4.71	□□□□□ -1.66
VPS30	YPL120W	YKU70	P32807	602 aa		4.71	□□□□□ -1.66
VPS30	YPL120W	YIL177C	P40434	1758 aa		4.71	□□□□□ -1.66
VPS30	YPL120W	YJL225C	P40889	1758 aa		4.71	□□□□□ -1.66
VPS30	YPL120W	APE3	P37302	537 aa	Known RBP	4.7	□□□□□ -1.66
VPS30	YPL120W	ADE16	P54113	591 aa	Known RBP	4.7	□□□□□ -1.66
VPS30	YPL120W	ERO1	Q03103	563 aa		4.7	□□□□□ -1.66
VPS30	YPL120W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
VPS30	YPL120W	CSR2	Q12734	1121 aa		4.7	□□□□□ -1.66
VPS30	YPL120W	RPO41	P13433	1351 aa	Known RBP	4.7	□□□□□ -1.66
VPS30	YPL120W	YLL067C	Q07888	1374 aa		4.7	□□□□□ -1.66
VPS30	YPL120W	PFK1	P16861	987 aa	Known RBP	4.7	□□□□□ -1.66
VPS30	YPL120W	RAD53	P22216	821 aa		4.7	□□□□□ -1.66
VPS30	YPL120W	MSM1	P22438	575 aa		4.7	□□□□□ -1.66
VPS30	YPL120W	TYW3	P53177	273 aa		4.7	□□□□□ -1.66
VPS30	YPL120W	AIM39	Q08223	395 aa		4.7	□□□□□ -1.66
VPS30	YPL120W	SIR4	P11978	1358 aa		4.69	□□□□□ -1.66
VPS30	YPL120W	YAP1801	P38856	637 aa		4.69	□□□□□ -1.66
VPS30	YPL120W	MTC3	P53077	123 aa		4.69	□□□□□ -1.66
VPS30	YPL120W	YGR012W	P53206	393 aa		4.69	□□□□□ -1.66
VPS30	YPL120W	RMD1	Q03441	430 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms