RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C RPT1P33299 467 aaKnown RBP8.76□□□□□ -1.01
LSP1YPL004C VID24P38263 362 aa8.76□□□□□ -1.01
LSP1YPL004C ISM1P48526 1002 aa8.76□□□□□ -1.01
LSP1YPL004C YGR237CP50089 785 aa8.76□□□□□ -1.01
LSP1YPL004C YVH1Q02256 364 aaKnown RBP8.76□□□□□ -1.01
LSP1YPL004C TRS130Q03660 1102 aa8.76□□□□□ -1.01
LSP1YPL004C YLR422WQ06409 1932 aa8.76□□□□□ -1.01
LSP1YPL004C LAA1P39526 2014 aa8.75□□□□□ -1.01
LSP1YPL004C MAK16P10962 306 aaPredicted RBP8.75□□□□□ -1.01
LSP1YPL004C MMS4P38257 691 aa8.75□□□□□ -1.01
LSP1YPL004C NPR3P38742 1146 aa8.75□□□□□ -1.01
LSP1YPL004C OPT1P40897 799 aa8.75□□□□□ -1.01
LSP1YPL004C LCB2P40970 561 aa8.75□□□□□ -1.01
LSP1YPL004C LAM5P43560 674 aa8.75□□□□□ -1.01
LSP1YPL004C ORC5P50874 479 aa8.75□□□□□ -1.01
LSP1YPL004C MCM6P53091 1017 aaKnown RBP8.75□□□□□ -1.01
LSP1YPL004C TPO2P53283 614 aa8.75□□□□□ -1.01
LSP1YPL004C YLR455WQ06188 304 aa8.75□□□□□ -1.01
LSP1YPL004C SPP382Q06411 708 aaPredicted RBP8.75□□□□□ -1.01
LSP1YPL004C AFT2Q08957 416 aa8.75□□□□□ -1.01
LSP1YPL004C TFC8Q12308 588 aa8.75□□□□□ -1.01
LSP1YPL004C TOM70P07213 617 aaKnown RBP8.74□□□□□ -1.01
LSP1YPL004C MSD1P15179 658 aaKnown RBP8.74□□□□□ -1.01
LSP1YPL004C OM45P16547 393 aa8.74□□□□□ -1.01
LSP1YPL004C GSY2P27472 705 aa8.74□□□□□ -1.01
LSP1YPL004C BIO2P32451 375 aa8.74□□□□□ -1.01
LSP1YPL004C RRM3P38766 723 aa8.74□□□□□ -1.01
LSP1YPL004C UBP5P39944 805 aa8.74□□□□□ -1.01
LSP1YPL004C BUD16P39988 312 aa8.74□□□□□ -1.01
LSP1YPL004C ESL1P40456 1118 aa8.74□□□□□ -1.01
LSP1YPL004C ALT2P52892 507 aa8.74□□□□□ -1.01
LSP1YPL004C YGR130CP53278 816 aa8.74□□□□□ -1.01
LSP1YPL004C UTP14Q04500 899 aaKnown RBP8.74□□□□□ -1.01
LSP1YPL004C YOL075CQ08234 1294 aa8.74□□□□□ -1.01
LSP1YPL004C ZPS1Q12512 249 aa8.74□□□□□ -1.01
LSP1YPL004C ADE4P04046 510 aaKnown RBP8.73□□□□□ -1.01
LSP1YPL004C MRPL7P36519 292 aa8.73□□□□□ -1.01
LSP1YPL004C NPP2P39997 493 aa8.73□□□□□ -1.01
LSP1YPL004C TOS3P43637 560 aa8.73□□□□□ -1.01
LSP1YPL004C SCD6P45978 349 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
LSP1YPL004C AIP1P46680 615 aaKnown RBP8.73□□□□□ -1.01
LSP1YPL004C ASN1P49089 572 aaKnown RBP8.73□□□□□ -1.01
LSP1YPL004C LSC2P53312 427 aa8.73□□□□□ -1.01
LSP1YPL004C DON1Q05610 365 aa8.73□□□□□ -1.01
LSP1YPL004C COG4Q06096 861 aa8.73□□□□□ -1.01
LSP1YPL004C RLP24Q07915 199 aaKnown RBP8.73□□□□□ -1.01
LSP1YPL004C YPL216WQ08964 1102 aa8.73□□□□□ -1.01
LSP1YPL004C RSA4P25382 515 aaKnown RBP8.72□□□□□ -1.01
LSP1YPL004C OXP1P28273 1286 aa8.72□□□□□ -1.01
LSP1YPL004C PSO2P30620 661 aa8.72□□□□□ -1.01
LSP1YPL004C MUD1P32605 298 aaKnown RBP8.72□□□□□ -1.01
LSP1YPL004C ADE17P38009 592 aaKnown RBP8.72□□□□□ -1.01
LSP1YPL004C ARL1P38116 183 aaKnown RBP8.72□□□□□ -1.01
LSP1YPL004C YER186CP40101 306 aa8.72□□□□□ -1.01
LSP1YPL004C EMI2Q04409 500 aaKnown RBP8.72□□□□□ -1.01
LSP1YPL004C YOR022CQ12204 715 aa8.72□□□□□ -1.01
LSP1YPL004C SCP160P06105 1222 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02 RIP-Chip
LSP1YPL004C VMA1P17255 1071 aaKnown RBP8.71□□□□□ -1.02
LSP1YPL004C ROX1P25042 368 aa8.71□□□□□ -1.02
LSP1YPL004C APN2P38207 520 aa8.71□□□□□ -1.02
LSP1YPL004C ULI1P43604 169 aa8.71□□□□□ -1.02
LSP1YPL004C HSH155P49955 971 aaKnown RBP8.71□□□□□ -1.02
LSP1YPL004C EBS1Q03466 884 aaKnown RBP8.71□□□□□ -1.02
LSP1YPL004C SHS1Q07657 551 aa8.71□□□□□ -1.02
LSP1YPL004C FAL1Q12099 399 aaKnown RBP8.71□□□□□ -1.02
LSP1YPL004C SGT2Q12118 346 aaKnown RBP8.71□□□□□ -1.02
LSP1YPL004C CHS2P14180 963 aa8.7□□□□□ -1.02
LSP1YPL004C POL3P15436 1097 aa8.7□□□□□ -1.02
LSP1YPL004C IDI1P15496 288 aa8.7□□□□□ -1.02
LSP1YPL004C PRR1P28708 518 aa8.7□□□□□ -1.02
LSP1YPL004C CYS3P31373 394 aaKnown RBP8.7□□□□□ -1.02
LSP1YPL004C CSE2P33308 149 aa8.7□□□□□ -1.02
LSP1YPL004C FIG4P42837 879 aa8.7□□□□□ -1.02
LSP1YPL004C MET13P53128 600 aa8.7□□□□□ -1.02
LSP1YPL004C ALG11P53954 548 aaKnown RBP8.7□□□□□ -1.02
LSP1YPL004C TIM8P57744 87 aa8.7□□□□□ -1.02
LSP1YPL004C GFD1Q04839 188 aaKnown RBP8.7□□□□□ -1.02
LSP1YPL004C HCR1Q05775 265 aaKnown RBP8.7□□□□□ -1.02
LSP1YPL004C MLH2Q07980 695 aa8.7□□□□□ -1.02
LSP1YPL004C SSB1P11484 613 aaKnown RBP8.69□□□□□ -1.02
LSP1YPL004C NAT1P12945 854 aaKnown RBP8.69□□□□□ -1.02
LSP1YPL004C MRC1P25588 1096 aa8.69□□□□□ -1.02
LSP1YPL004C TRM2P33753 639 aa8.69□□□□□ -1.02
LSP1YPL004C STB5P38699 743 aa8.69□□□□□ -1.02
LSP1YPL004C YHR202WP38887 602 aa8.69□□□□□ -1.02
LSP1YPL004C FMP10P40098 244 aa8.69□□□□□ -1.02
LSP1YPL004C SSB2P40150 613 aaKnown RBP8.69□□□□□ -1.02
LSP1YPL004C DAS1P47005 663 aa8.69□□□□□ -1.02
LSP1YPL004C EAF7P53911 425 aaKnown RBP8.69□□□□□ -1.02
LSP1YPL004C DNL4Q08387 944 aaPredicted RBP8.69□□□□□ -1.02
LSP1YPL004C CDC37P06101 506 aaKnown RBP8.68□□□□□ -1.02
LSP1YPL004C SPT2P06843 333 aaPredicted RBP8.68□□□□□ -1.02
LSP1YPL004C ASP3-2P0CX77 362 aa8.68□□□□□ -1.02
LSP1YPL004C ASP3-3P0CX78 362 aa8.68□□□□□ -1.02
LSP1YPL004C ASP3-4P0CX79 362 aa8.68□□□□□ -1.02
LSP1YPL004C ASP3-1P0CZ17 362 aa8.68□□□□□ -1.02
LSP1YPL004C RPL4AP10664 362 aaKnown RBP8.68□□□□□ -1.02
LSP1YPL004C TAF13P11747 167 aa8.68□□□□□ -1.02
LSP1YPL004C ATE1P16639 503 aa8.68□□□□□ -1.02
LSP1YPL004C ADK2P26364 225 aa8.68□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms