RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeast

Gene HSH49, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSH49	YOR319W	SRT1	Q03175	343 aa		4.94	□□□□□ -1.62
HSH49	YOR319W	YLR224W	Q05947	369 aa		4.94	□□□□□ -1.62
HSH49	YOR319W	NOP12	Q08208	459 aa	Known RBP	4.94	□□□□□ -1.62
HSH49	YOR319W	ADR1	P07248	1323 aa		4.94	□□□□□ -1.62
HSH49	YOR319W	RPL8A	P17076	256 aa	Known RBP	4.93	□□□□□ -1.62
HSH49	YOR319W	FUN30	P31380	1131 aa		4.93	□□□□□ -1.62
HSH49	YOR319W	HBS1	P32769	611 aa	Known RBP	4.93	□□□□□ -1.62
HSH49	YOR319W	GDH3	P39708	457 aa		4.93	□□□□□ -1.62
HSH49	YOR319W	MET12	P46151	657 aa		4.93	□□□□□ -1.62
HSH49	YOR319W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
HSH49	YOR319W	YGR012W	P53206	393 aa		4.93	□□□□□ -1.62
HSH49	YOR319W	HBN1	Q96VH4	193 aa		4.93	□□□□□ -1.62
HSH49	YOR319W	TOM70	P07213	617 aa	Known RBP	4.92	□□□□□ -1.62
HSH49	YOR319W	PEX6	P33760	1030 aa		4.92	□□□□□ -1.62
HSH49	YOR319W	ECM21	P38167	1117 aa	Known RBP	4.92	□□□□□ -1.62
HSH49	YOR319W	GIC1	P38785	314 aa		4.92	□□□□□ -1.62
HSH49	YOR319W	SUN4	P53616	420 aa		4.92	□□□□□ -1.62
HSH49	YOR319W	YNR029C	P53729	429 aa	Known RBP	4.92	□□□□□ -1.62
HSH49	YOR319W	TFB2	Q02939	513 aa		4.92	□□□□□ -1.62
HSH49	YOR319W	DUS3	Q06053	668 aa	Known RBP	4.92	□□□□□ -1.62
HSH49	YOR319W	URN1	Q06525	465 aa	Known RBP	4.92	□□□□□ -1.62
HSH49	YOR319W	ADY3	Q07732	790 aa		4.92	□□□□□ -1.62
HSH49	YOR319W	HIS5	P07172	385 aa		4.91	□□□□□ -1.62
HSH49	YOR319W	MRC1	P25588	1096 aa		4.91	□□□□□ -1.62
HSH49	YOR319W	PAF1	P38351	445 aa		4.91	□□□□□ -1.62
HSH49	YOR319W	PLB1	P39105	664 aa		4.91	□□□□□ -1.62
HSH49	YOR319W	SIT1	P39980	628 aa		4.91	□□□□□ -1.62
HSH49	YOR319W	NUG1	P40010	520 aa	Known RBP	4.91	□□□□□ -1.62
HSH49	YOR319W	NOP2	P40991	618 aa	Known RBP	4.91	□□□□□ -1.62
HSH49	YOR319W	PSP2	P50109	593 aa	Known RBP	4.91	□□□□□ -1.62
HSH49	YOR319W	ZDS1	P50111	915 aa	Known RBP	4.91	□□□□□ -1.62
HSH49	YOR319W	MAL11	P53048	616 aa		4.91	□□□□□ -1.62
HSH49	YOR319W	SLI1	P53304	468 aa		4.91	□□□□□ -1.62
HSH49	YOR319W	YDR306C	Q06640	478 aa		4.91	□□□□□ -1.62
HSH49	YOR319W	NTO1	Q12311	748 aa		4.91	□□□□□ -1.62
HSH49	YOR319W	HSF1	P10961	833 aa		4.9	□□□□□ -1.63
HSH49	YOR319W	PMI40	P29952	429 aa	Known RBP	4.9	□□□□□ -1.63
HSH49	YOR319W	CDC12	P32468	407 aa	Known RBP	4.9	□□□□□ -1.63
HSH49	YOR319W	SRP101	P32916	621 aa		4.9	□□□□□ -1.63
HSH49	YOR319W	AIM21	P40563	679 aa		4.9	□□□□□ -1.63
HSH49	YOR319W	UBP6	P43593	499 aa	Known RBP	4.9	□□□□□ -1.63
HSH49	YOR319W	CDA1	Q06702	301 aa		4.9	□□□□□ -1.63
HSH49	YOR319W	MDM12	Q92328	271 aa		4.9	□□□□□ -1.63
HSH49	YOR319W	TOP3	P13099	656 aa		4.89	□□□□□ -1.63
HSH49	YOR319W	GSY1	P23337	708 aa		4.89	□□□□□ -1.63
HSH49	YOR319W	AAR2	P32357	355 aa	Predicted RBP	4.89	□□□□□ -1.63
HSH49	YOR319W	PET10	P36139	283 aa		4.89	□□□□□ -1.63
HSH49	YOR319W	PMT3	P47190	753 aa		4.89	□□□□□ -1.63
HSH49	YOR319W	HLJ1	P48353	224 aa		4.89	□□□□□ -1.63
HSH49	YOR319W	SPE1	P08432	466 aa		4.88	□□□□□ -1.63
HSH49	YOR319W	MSD1	P15179	658 aa	Known RBP	4.88	□□□□□ -1.63
HSH49	YOR319W	PPH3	P32345	308 aa		4.88	□□□□□ -1.63
HSH49	YOR319W	RPC82	P32349	654 aa		4.88	□□□□□ -1.63
HSH49	YOR319W	YPT53	P36019	220 aa		4.88	□□□□□ -1.63
HSH49	YOR319W	CHA4	P43634	648 aa		4.88	□□□□□ -1.63
HSH49	YOR319W	PHO23	P50947	330 aa		4.88	□□□□□ -1.63
HSH49	YOR319W	NUP145	P49687	1317 aa		4.88	□□□□□ -1.63
HSH49	YOR319W	MEF1	P25039	761 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	YBR284W	P38150	797 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	DSS1	P39112	969 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	NPP2	P39997	493 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	YER158C	P40095	573 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	GYP7	P48365	746 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	YGR237C	P50089	785 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	YNL193W	P53870	558 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	SFB2	P53953	876 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	CTF4	Q01454	927 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	YPR196W	Q06595	470 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	YOL057W	Q08225	711 aa		4.87	□□□□□ -1.63
HSH49	YOR319W	ADE8	P04161	214 aa		4.86	□□□□□ -1.63
HSH49	YOR319W	DCG1	P32460	244 aa		4.86	□□□□□ -1.63
HSH49	YOR319W	ATG19	P35193	415 aa		4.86	□□□□□ -1.63
HSH49	YOR319W	GRX7	P38068	203 aa		4.86	□□□□□ -1.63
HSH49	YOR319W	ENP1	P38333	483 aa	Known RBP	4.86	□□□□□ -1.63
HSH49	YOR319W	TPM2	P40414	161 aa		4.86	□□□□□ -1.63
HSH49	YOR319W	ALG2	P43636	503 aa		4.86	□□□□□ -1.63
HSH49	YOR319W	LCD1	Q04377	747 aa		4.86	□□□□□ -1.63
HSH49	YOR319W	PMA1	P05030	918 aa	Known RBP	4.85	□□□□□ -1.63
HSH49	YOR319W	YKR078W	P36158	585 aa	Known RBP	4.85	□□□□□ -1.63
HSH49	YOR319W	BUL2	Q03758	920 aa	Known RBP	4.85	□□□□□ -1.63
HSH49	YOR319W	YLR001C	Q07895	862 aa		4.85	□□□□□ -1.63
HSH49	YOR319W	RAD53	P22216	821 aa		4.84	□□□□□ -1.63
HSH49	YOR319W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
HSH49	YOR319W	CDC48	P25694	835 aa	Known RBP	4.84	□□□□□ -1.63
HSH49	YOR319W	TSL1	P38427	1098 aa	Known RBP	4.84	□□□□□ -1.63
HSH49	YOR319W	SDA1	P53313	767 aa	Known RBP	4.84	□□□□□ -1.63
HSH49	YOR319W	UME1	Q03010	460 aa		4.84	□□□□□ -1.63
HSH49	YOR319W	THI73	Q07904	523 aa		4.84	□□□□□ -1.63
HSH49	YOR319W	YPR071W	Q12346	211 aa		4.84	□□□□□ -1.63
HSH49	YOR319W	VBA3	P25594	458 aa		4.83	□□□□□ -1.64
HSH49	YOR319W	YEL1	P34225	687 aa		4.83	□□□□□ -1.64
HSH49	YOR319W	YRO2	P38079	344 aa		4.83	□□□□□ -1.64
HSH49	YOR319W	CHS7	P38843	316 aa		4.83	□□□□□ -1.64
HSH49	YOR319W	URM1	P40554	99 aa	Predicted RBP	4.83	□□□□□ -1.64
HSH49	YOR319W	FOL1	P53848	824 aa		4.83	□□□□□ -1.64
HSH49	YOR319W	NPC2	Q12408	173 aa		4.83	□□□□□ -1.64
HSH49	YOR319W	KCS1	Q12494	1050 aa		4.83	□□□□□ -1.64
HSH49	YOR319W	PFK1	P16861	987 aa	Known RBP	4.82	□□□□□ -1.64
HSH49	YOR319W	AFR1	P33304	620 aa		4.82	□□□□□ -1.64
HSH49	YOR319W	SPC29	P33419	253 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms