RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeast

Gene HRT1, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT1	YOL133W	YCL002C	P25565	263 aa		6.31	□□□□□ -1.4
HRT1	YOL133W	RPD3	P32561	433 aa		6.31	□□□□□ -1.4
HRT1	YOL133W	FPR3	P38911	411 aa	Known RBP	6.31	□□□□□ -1.4
HRT1	YOL133W	CHA4	P43634	648 aa		6.31	□□□□□ -1.4
HRT1	YOL133W	MET12	P46151	657 aa		6.31	□□□□□ -1.4
HRT1	YOL133W	YJR142W	P47173	342 aa		6.31	□□□□□ -1.4
HRT1	YOL133W	DNM1	P54861	757 aa		6.31	□□□□□ -1.4
HRT1	YOL133W	YPL277C	Q08989	487 aa		6.31	□□□□□ -1.4
HRT1	YOL133W	VBA3	P25594	458 aa		6.3	□□□□□ -1.4
HRT1	YOL133W	THI80	P35202	319 aa		6.3	□□□□□ -1.4
HRT1	YOL133W	GCV2	P49095	1034 aa		6.3	□□□□□ -1.4
HRT1	YOL133W	YKR011C	Q02209	353 aa		6.3	□□□□□ -1.4
HRT1	YOL133W	LRS4	Q04087	347 aa	Known RBP	6.3	□□□□□ -1.4
HRT1	YOL133W	RSC3	Q06639	885 aa		6.3	□□□□□ -1.4
HRT1	YOL133W	WHI4	Q07655	649 aa	Known RBP	6.3	□□□□□ -1.4
HRT1	YOL133W	ENA1	P13587	1091 aa		6.29	□□□□□ -1.4
HRT1	YOL133W	MIH1	P23748	554 aa		6.29	□□□□□ -1.4
HRT1	YOL133W	CDC20	P26309	610 aa		6.29	□□□□□ -1.4
HRT1	YOL133W	ELM1	P32801	640 aa		6.29	□□□□□ -1.4
HRT1	YOL133W	MCD4	P36051	919 aa		6.29	□□□□□ -1.4
HRT1	YOL133W	TAD1	P53065	400 aa		6.29	□□□□□ -1.4
HRT1	YOL133W	NOG2	P53742	486 aa	Known RBP	6.29	□□□□□ -1.4
HRT1	YOL133W	ENA2	Q01896	1091 aa		6.29	□□□□□ -1.4
HRT1	YOL133W	TFB2	Q02939	513 aa		6.29	□□□□□ -1.4
HRT1	YOL133W	GPB1	Q08886	897 aa		6.29	□□□□□ -1.4
HRT1	YOL133W	ENA5	Q12691	1091 aa		6.29	□□□□□ -1.4
HRT1	YOL133W	SOD2	P00447	233 aa		6.28	□□□□□ -1.4
HRT1	YOL133W	DAL7	P21826	554 aa		6.28	□□□□□ -1.4
HRT1	YOL133W	GAS1	P22146	559 aa	Known RBP	6.28	□□□□□ -1.4
HRT1	YOL133W	EMC1	P25574	760 aa		6.28	□□□□□ -1.4
HRT1	YOL133W	AIM3	P38266	947 aa	Known RBP	6.28	□□□□□ -1.4
HRT1	YOL133W	NIT1	P40447	199 aa		6.28	□□□□□ -1.4
HRT1	YOL133W	CAF16	P43569	289 aa		6.28	□□□□□ -1.4
HRT1	YOL133W	NIT3	P49954	291 aa		6.28	□□□□□ -1.4
HRT1	YOL133W	UPC2	Q12151	913 aa		6.28	□□□□□ -1.4
HRT1	YOL133W	YBR182C-A	Q8TGU6	64 aa		6.28	□□□□□ -1.4
HRT1	YOL133W	RPS13	P05756	151 aa	Known RBP	6.27	□□□□□ -1.41
HRT1	YOL133W	HIS5	P07172	385 aa		6.27	□□□□□ -1.41
HRT1	YOL133W	SRD1	P09007	221 aa		6.27	□□□□□ -1.41
HRT1	YOL133W	PRP6	P19735	899 aa	Predicted RBP	6.27	□□□□□ -1.41
HRT1	YOL133W	RFA1	P22336	621 aa	Known RBP	6.27	□□□□□ -1.41
HRT1	YOL133W	POA1	P38218	177 aa		6.27	□□□□□ -1.41
HRT1	YOL133W	DSS1	P39112	969 aa		6.27	□□□□□ -1.41
HRT1	YOL133W	GTF1	P53260	183 aa	Predicted RBP	6.27	□□□□□ -1.41
HRT1	YOL133W	YDR338C	Q05497	695 aa		6.27	□□□□□ -1.41
HRT1	YOL133W	REH1	Q06709	432 aa		6.27	□□□□□ -1.41
HRT1	YOL133W	THI21	Q08975	551 aa		6.27	□□□□□ -1.41
HRT1	YOL133W	RNQ1	P25367	405 aa		6.26	□□□□□ -1.41
HRT1	YOL133W	PER1	P25625	357 aa		6.26	□□□□□ -1.41
HRT1	YOL133W	TYE7	P33122	291 aa	Predicted RBP	6.26	□□□□□ -1.41
HRT1	YOL133W	CTF8	P38877	133 aa		6.26	□□□□□ -1.41
HRT1	YOL133W	ZDS1	P50111	915 aa	Known RBP	6.26	□□□□□ -1.41
HRT1	YOL133W	NCS6	P53088	359 aa		6.26	□□□□□ -1.41
HRT1	YOL133W	RIM8	P53179	542 aa		6.26	□□□□□ -1.41
HRT1	YOL133W	PBP1	P53297	722 aa	Known RBP	6.26	□□□□□ -1.41
HRT1	YOL133W	YNL193W	P53870	558 aa		6.26	□□□□□ -1.41
HRT1	YOL133W	SLU7	Q02775	382 aa	Known RBP	6.26	□□□□□ -1.41
HRT1	YOL133W	YAP6	Q03935	383 aa		6.26	□□□□□ -1.41
HRT1	YOL133W	YDR514C	Q04408	483 aa		6.26	□□□□□ -1.41
HRT1	YOL133W	UTP14	Q04500	899 aa	Known RBP	6.26	□□□□□ -1.41
HRT1	YOL133W	ACK1	Q07622	623 aa	Predicted RBP	6.26	□□□□□ -1.41
HRT1	YOL133W	PCL2	P25693	308 aa		6.25	□□□□□ -1.41
HRT1	YOL133W	CYS3	P31373	394 aa	Known RBP	6.25	□□□□□ -1.41
HRT1	YOL133W	SDP1	P40479	209 aa		6.25	□□□□□ -1.41
HRT1	YOL133W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
HRT1	YOL133W	HAL9	Q12180	1030 aa		6.25	□□□□□ -1.41
HRT1	YOL133W	GSY1	P23337	708 aa		6.24	□□□□□ -1.41
HRT1	YOL133W	STO1	P34160	861 aa	Known RBP	6.24	□□□□□ -1.41
HRT1	YOL133W	YIL108W	P40483	696 aa	Known RBP	6.24	□□□□□ -1.41
HRT1	YOL133W	CEP3	P40969	608 aa		6.24	□□□□□ -1.41
HRT1	YOL133W	PSP2	P50109	593 aa	Known RBP	6.24	□□□□□ -1.41
HRT1	YOL133W	RXT3	Q07458	294 aa		6.24	□□□□□ -1.41
HRT1	YOL133W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
HRT1	YOL133W	YEL1	P34225	687 aa		6.23	□□□□□ -1.41
HRT1	YOL133W	ATG19	P35193	415 aa		6.23	□□□□□ -1.41
HRT1	YOL133W	MGS1	P40151	587 aa		6.23	□□□□□ -1.41
HRT1	YOL133W	SNP1	Q00916	300 aa	Predicted RBP	6.23	□□□□□ -1.41
HRT1	YOL133W	YLR224W	Q05947	369 aa		6.23	□□□□□ -1.41
HRT1	YOL133W	NOP12	Q08208	459 aa	Known RBP	6.23	□□□□□ -1.41
HRT1	YOL133W	GPR1	Q12361	961 aa		6.23	□□□□□ -1.41
HRT1	YOL133W	ADR1	P07248	1323 aa		6.23	□□□□□ -1.41
HRT1	YOL133W	RLP7	P40693	322 aa	Known RBP	6.22	□□□□□ -1.41
HRT1	YOL133W	AVT1	P47082	602 aa		6.22	□□□□□ -1.41
HRT1	YOL133W	SPT20	P50875	604 aa		6.22	□□□□□ -1.41
HRT1	YOL133W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
HRT1	YOL133W	YNR029C	P53729	429 aa	Known RBP	6.22	□□□□□ -1.41
HRT1	YOL133W	DUS1	P53759	423 aa	Known RBP	6.22	□□□□□ -1.41
HRT1	YOL133W	YOR022C	Q12204	715 aa		6.22	□□□□□ -1.41
HRT1	YOL133W	KCS1	Q12494	1050 aa		6.22	□□□□□ -1.41
HRT1	YOL133W	PRP4	P20053	465 aa	Known RBP	6.21	□□□□□ -1.42
HRT1	YOL133W	LST4	P34239	828 aa		6.21	□□□□□ -1.42
HRT1	YOL133W	PCM1	P38628	557 aa	Known RBP	6.21	□□□□□ -1.42
HRT1	YOL133W	UBP12	P39538	1254 aa		6.21	□□□□□ -1.42
HRT1	YOL133W	MET13	P53128	600 aa		6.21	□□□□□ -1.42
HRT1	YOL133W	VPS30	Q02948	557 aa		6.21	□□□□□ -1.42
HRT1	YOL133W	TUB3	P09734	445 aa	Known RBP	6.2	□□□□□ -1.42
HRT1	YOL133W	RAD18	P10862	487 aa		6.2	□□□□□ -1.42
HRT1	YOL133W	HOG1	P32485	435 aa		6.2	□□□□□ -1.42
HRT1	YOL133W	PRP43	P53131	767 aa	Known RBP	6.2	□□□□□ -1.42
HRT1	YOL133W	COG8	Q04632	607 aa		6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms