RNA–Protein interactions for RNA: YOL122C

SMF1, Transcript of Divalent metal ion transporter, yeast

Gene SMF1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMF1	YOL122C	YDR514C	Q04408	483 aa		5.19	□□□□□ -1.58
SMF1	YOL122C	SAM35	P14693	329 aa		5.18	□□□□□ -1.58
SMF1	YOL122C	VPS24	P36095	224 aa	Known RBP	5.18	□□□□□ -1.58
SMF1	YOL122C	NIT3	P49954	291 aa		5.18	□□□□□ -1.58
SMF1	YOL122C	LRS4	Q04087	347 aa	Known RBP	5.18	□□□□□ -1.58
SMF1	YOL122C	XYL2	Q07993	356 aa		5.18	□□□□□ -1.58
SMF1	YOL122C	GUP2	Q08929	609 aa		5.18	□□□□□ -1.58
SMF1	YOL122C	GIN4	Q12263	1142 aa		5.18	□□□□□ -1.58
SMF1	YOL122C	COQ4	O13525	335 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	MPH2	P0CD99	609 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	PIK1	P39104	1066 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	PEA2	P40091	420 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	HFM1	P51979	1187 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	YTM1	Q12024	460 aa	Predicted RBP	5.17	□□□□□ -1.58
SMF1	YOL122C	NYV1	Q12255	253 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	SGS1	P35187	1447 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	SSN2	P38931	1420 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	THS1	P04801	734 aa	Known RBP	5.17	□□□□□ -1.58
SMF1	YOL122C	SST2	P11972	698 aa	Known RBP	5.17	□□□□□ -1.58
SMF1	YOL122C	ACE2	P21192	770 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	DAL7	P21826	554 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	NIT2	P47016	307 aa		5.17	□□□□□ -1.58
SMF1	YOL122C	ATP4	P05626	244 aa		5.16	□□□□□ -1.58
SMF1	YOL122C	KAR1	P11927	433 aa		5.16	□□□□□ -1.58
SMF1	YOL122C	YEF3	P16521	1044 aa	Known RBP	5.16	□□□□□ -1.58
SMF1	YOL122C	PWP2	P25635	923 aa	Known RBP	5.16	□□□□□ -1.58
SMF1	YOL122C	FUN30	P31380	1131 aa		5.16	□□□□□ -1.58
SMF1	YOL122C	YHL012W	P38709	493 aa		5.16	□□□□□ -1.58
SMF1	YOL122C	GPP2	P40106	250 aa	Known RBP	5.16	□□□□□ -1.58
SMF1	YOL122C	GZF3	P42944	551 aa	Known RBP	5.16	□□□□□ -1.58
SMF1	YOL122C	UBC9	P50623	157 aa	Predicted RBP	5.16	□□□□□ -1.58
SMF1	YOL122C	SDH1	Q00711	640 aa		5.16	□□□□□ -1.58
SMF1	YOL122C	ECM16	Q04217	1267 aa	Known RBP	5.16	□□□□□ -1.58
SMF1	YOL122C	COG8	Q04632	607 aa		5.16	□□□□□ -1.58
SMF1	YOL122C	YPR196W	Q06595	470 aa		5.16	□□□□□ -1.58
SMF1	YOL122C	YVC1	Q12324	675 aa		5.16	□□□□□ -1.58
SMF1	YOL122C	CCR4	P31384	837 aa	Known RBP	5.15	□□□□□ -1.58
SMF1	YOL122C	CCZ1	P38273	704 aa		5.15	□□□□□ -1.58
SMF1	YOL122C	DUG1	P43616	481 aa	Known RBP	5.15	□□□□□ -1.58
SMF1	YOL122C	ALY2	P47029	1046 aa		5.15	□□□□□ -1.58
SMF1	YOL122C	ARI1	P53111	347 aa	Known RBP	5.15	□□□□□ -1.58
SMF1	YOL122C	YPL034W	Q03083	165 aa		5.15	□□□□□ -1.58
SMF1	YOL122C	NHX1	Q04121	633 aa		5.15	□□□□□ -1.58
SMF1	YOL122C	TRX2	P22803	104 aa	Known RBP	5.14	□□□□□ -1.59
SMF1	YOL122C	WHI3	P34761	661 aa	Known RBP	5.14	□□□□□ -1.59
SMF1	YOL122C	RRT14	P40470	206 aa		5.14	□□□□□ -1.59
SMF1	YOL122C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
SMF1	YOL122C	ECM9	Q02202	377 aa		5.14	□□□□□ -1.59
SMF1	YOL122C	REH1	Q06709	432 aa		5.14	□□□□□ -1.59
SMF1	YOL122C	NBA1	Q08229	501 aa	Known RBP	5.14	□□□□□ -1.59
SMF1	YOL122C	AEP2	P22136	580 aa		5.14	□□□□□ -1.59
SMF1	YOL122C	RSC6	P25632	483 aa		5.14	□□□□□ -1.59
SMF1	YOL122C	NAM7	P30771	971 aa	Known RBP	5.14	□□□□□ -1.59
SMF1	YOL122C	HSP78	P33416	811 aa		5.14	□□□□□ -1.59
SMF1	YOL122C	MNN11	P46985	422 aa	Known RBP	5.14	□□□□□ -1.59
SMF1	YOL122C	YGR153W	P48238	217 aa		5.14	□□□□□ -1.59
SMF1	YOL122C	VPS72	Q03388	795 aa		5.14	□□□□□ -1.59
SMF1	YOL122C	YBR182C-A	Q8TGU6	64 aa		5.14	□□□□□ -1.59
SMF1	YOL122C	SPT7	P35177	1332 aa		5.14	□□□□□ -1.59
SMF1	YOL122C	URA1	P28272	314 aa	Predicted RBP	5.13	□□□□□ -1.59
SMF1	YOL122C	YAP1801	P38856	637 aa		5.13	□□□□□ -1.59
SMF1	YOL122C	IES5	P40060	125 aa		5.13	□□□□□ -1.59
SMF1	YOL122C	HDA1	P53973	706 aa		5.13	□□□□□ -1.59
SMF1	YOL122C	MET14	Q02196	202 aa		5.13	□□□□□ -1.59
SMF1	YOL122C	RSC58	Q07979	502 aa		5.13	□□□□□ -1.59
SMF1	YOL122C	SVS1	Q12254	260 aa		5.13	□□□□□ -1.59
SMF1	YOL122C	TCB3	Q03640	1545 aa	Known RBP	5.13	□□□□□ -1.59
SMF1	YOL122C	GAL1	P04385	528 aa		5.12	□□□□□ -1.59
SMF1	YOL122C	ECM21	P38167	1117 aa	Known RBP	5.12	□□□□□ -1.59
SMF1	YOL122C	RPN10	P38886	268 aa	Known RBP	5.12	□□□□□ -1.59
SMF1	YOL122C	AKR1	P39010	764 aa		5.12	□□□□□ -1.59
SMF1	YOL122C	DOT6	P40059	670 aa	Known RBP	5.12	□□□□□ -1.59
SMF1	YOL122C	CCT5	P40413	562 aa	Known RBP	5.12	□□□□□ -1.59
SMF1	YOL122C	RLP7	P40693	322 aa	Known RBP	5.12	□□□□□ -1.59
SMF1	YOL122C	PIP2	P52960	996 aa		5.12	□□□□□ -1.59
SMF1	YOL122C	NOG2	P53742	486 aa	Known RBP	5.12	□□□□□ -1.59
SMF1	YOL122C	ATG16	Q03818	150 aa		5.12	□□□□□ -1.59
SMF1	YOL122C	SEC3	P33332	1336 aa	Known RBP	5.12	□□□□□ -1.59
SMF1	YOL122C	NOT3	P06102	836 aa	Known RBP	5.11	□□□□□ -1.59
SMF1	YOL122C	RPS21A	P0C0V8	87 aa	Known RBP	5.11	□□□□□ -1.59
SMF1	YOL122C	RFA1	P22336	621 aa	Known RBP	5.11	□□□□□ -1.59
SMF1	YOL122C	SRO9	P25567	434 aa	Known RBP	5.11	□□□□□ -1.59
SMF1	YOL122C	SER1	P33330	395 aa	Known RBP	5.11	□□□□□ -1.59
SMF1	YOL122C	PGM1	P33401	570 aa	Known RBP	5.11	□□□□□ -1.59
SMF1	YOL122C	YKR051W	P36142	418 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	ABZ1	P37254	787 aa	Predicted RBP	5.11	□□□□□ -1.59
SMF1	YOL122C	TDA3	P38758	523 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	HXT6	P39003	570 aa	Known RBP	5.11	□□□□□ -1.59
SMF1	YOL122C	HXT7	P39004	570 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	CEP3	P40969	608 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	MMM1	P41800	426 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	RET2	P43621	546 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	SVL3	Q03088	825 aa	Known RBP	5.11	□□□□□ -1.59
SMF1	YOL122C	OSW2	Q12202	724 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	Q0142	Q9ZZW4	58 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	QCR6	P00127	147 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	CLC1	P17891	233 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	HEM12	P32347	362 aa	Predicted RBP	5.11	□□□□□ -1.59
SMF1	YOL122C	RPD3	P32561	433 aa		5.11	□□□□□ -1.59
SMF1	YOL122C	YGR130C	P53278	816 aa		5.11	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms