RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB2YNL209W LIF1P53150 421 aa5.02□□□□□ -1.61
SSB2YNL209W NGL3Q03210 505 aa5.02□□□□□ -1.61
SSB2YNL209W DUS3Q06053 668 aaKnown RBP5.02□□□□□ -1.61
SSB2YNL209W YLR326WQ06170 240 aaKnown RBP5.02□□□□□ -1.61
SSB2YNL209W RRP9Q06506 573 aaKnown RBP5.02□□□□□ -1.61
SSB2YNL209W ARR1Q06596 294 aa5.02□□□□□ -1.61
SSB2YNL209W YPR078CQ06813 372 aa5.02□□□□□ -1.61
SSB2YNL209W YPL277CQ08989 487 aa5.02□□□□□ -1.61
SSB2YNL209W FAL1Q12099 399 aaKnown RBP5.02□□□□□ -1.61
SSB2YNL209W APL1P27351 700 aa5.02□□□□□ -1.61
SSB2YNL209W MRF1P30775 413 aaPredicted RBP5.02□□□□□ -1.61
SSB2YNL209W SRB4P32569 687 aa5.02□□□□□ -1.61
SSB2YNL209W SUV3P32580 737 aa5.02□□□□□ -1.61
SSB2YNL209W PGM1P33401 570 aaKnown RBP5.02□□□□□ -1.61
SSB2YNL209W SMC2P38989 1170 aaKnown RBP5.02□□□□□ -1.61
SSB2YNL209W CCT4P39078 528 aaKnown RBP5.02□□□□□ -1.61
SSB2YNL209W RPN3P40016 523 aaKnown RBP5.02□□□□□ -1.61
SSB2YNL209W HUL5P53119 910 aa5.02□□□□□ -1.61
SSB2YNL209W YMR114CQ04471 368 aaKnown RBP5.02□□□□□ -1.61
SSB2YNL209W UTP14Q04500 899 aaKnown RBP5.02□□□□□ -1.61
SSB2YNL209W RSC2Q06488 889 aa5.02□□□□□ -1.61
SSB2YNL209W CRD1Q07560 283 aa5.02□□□□□ -1.61
SSB2YNL209W MLH2Q07980 695 aa5.02□□□□□ -1.61
SSB2YNL209W SIL1Q08199 421 aa5.02□□□□□ -1.61
SSB2YNL209W MED1Q12321 566 aa5.02□□□□□ -1.61
SSB2YNL209W YLR278CQ05854 1341 aa5.02□□□□□ -1.61
SSB2YNL209W RPS9BP05755 195 aaKnown RBP5.01□□□□□ -1.61
SSB2YNL209W GFA1P14742 717 aaKnown RBP5.01□□□□□ -1.61
SSB2YNL209W CMP2P14747 604 aa5.01□□□□□ -1.61
SSB2YNL209W PRP22P24384 1145 aaKnown RBP5.01□□□□□ -1.61
SSB2YNL209W CDC48P25694 835 aaKnown RBP5.01□□□□□ -1.61
SSB2YNL209W RTG2P32608 588 aaKnown RBP5.01□□□□□ -1.61
SSB2YNL209W TGL1P34163 548 aa5.01□□□□□ -1.61
SSB2YNL209W HOS2P53096 452 aaPredicted RBP5.01□□□□□ -1.61
SSB2YNL209W JJJ1P53863 590 aa5.01□□□□□ -1.61
SSB2YNL209W ALD6P54115 500 aaKnown RBP5.01□□□□□ -1.61
SSB2YNL209W DIG1Q03063 452 aaKnown RBP5.01□□□□□ -1.61
SSB2YNL209W SVF1Q05515 481 aa5.01□□□□□ -1.61
SSB2YNL209W OPY2Q06810 360 aa5.01□□□□□ -1.61
SSB2YNL209W FKS1P38631 1876 aaKnown RBP5□□□□□ -1.61
SSB2YNL209W GAL2P13181 574 aa5□□□□□ -1.61
SSB2YNL209W RPO26P20435 155 aa5□□□□□ -1.61
SSB2YNL209W CKI1P20485 582 aa5□□□□□ -1.61
SSB2YNL209W YDJ1P25491 409 aaKnown RBP5□□□□□ -1.61
SSB2YNL209W SPT5P27692 1063 aaKnown RBP5□□□□□ -1.61
SSB2YNL209W YEL043WP32618 956 aa5□□□□□ -1.61
SSB2YNL209W BEM4P39011 633 aa5□□□□□ -1.61
SSB2YNL209W CIN4P39110 191 aa5□□□□□ -1.61
SSB2YNL209W BUD16P39988 312 aa5□□□□□ -1.61
SSB2YNL209W LCB2P40970 561 aa5□□□□□ -1.61
SSB2YNL209W YMR1P47147 688 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
SSB2YNL209W MAL13P53338 473 aa5□□□□□ -1.61
SSB2YNL209W NCS2P53923 493 aaPredicted RBP5□□□□□ -1.61
SSB2YNL209W SEC5P89102 971 aa5□□□□□ -1.61
SSB2YNL209W UBP3Q01477 912 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
SSB2YNL209W GYL1Q04322 720 aa5□□□□□ -1.61
SSB2YNL209W UBX5Q06682 500 aa5□□□□□ -1.61
SSB2YNL209W SUB2Q07478 446 aaKnown RBP5□□□□□ -1.61
SSB2YNL209W OSH2Q12451 1283 aa5□□□□□ -1.61
SSB2YNL209W YDR461C-AQ2V2P7 80 aa5□□□□□ -1.61
SSB2YNL209W PGK1P00560 416 aaKnown RBP5□□□□□ -1.61
SSB2YNL209W ERG11P10614 530 aa5□□□□□ -1.61
SSB2YNL209W CHS2P14180 963 aa5□□□□□ -1.61
SSB2YNL209W KAR3P17119 729 aa5□□□□□ -1.61
SSB2YNL209W ZUO1P32527 433 aaKnown RBP5□□□□□ -1.61
SSB2YNL209W UTR4P32626 227 aa5□□□□□ -1.61
SSB2YNL209W KTR2P33550 425 aa5□□□□□ -1.61
SSB2YNL209W YKR023WP36119 530 aaKnown RBP5□□□□□ -1.61
SSB2YNL209W FAF1P40546 346 aaPredicted RBP5□□□□□ -1.61
SSB2YNL209W MIC19P43594 170 aa5□□□□□ -1.61
SSB2YNL209W AVT1P47082 602 aa5□□□□□ -1.61
SSB2YNL209W PXR1P53335 271 aaPredicted RBP5□□□□□ -1.61
SSB2YNL209W HST2P53686 357 aa5□□□□□ -1.61
SSB2YNL209W CNM67P53865 581 aaKnown RBP5□□□□□ -1.61
SSB2YNL209W YLR297WQ05899 129 aa5□□□□□ -1.61
SSB2YNL209W SPH1Q06160 661 aa5□□□□□ -1.61
SSB2YNL209W JIP5Q06214 492 aaPredicted RBP5□□□□□ -1.61
SSB2YNL209W MDM38Q08179 573 aa5□□□□□ -1.61
SSB2YNL209W SLX4Q12098 748 aa5□□□□□ -1.61
SSB2YNL209W HSP42Q12329 375 aa5□□□□□ -1.61
SSB2YNL209W WHI5Q12416 295 aa5□□□□□ -1.61
SSB2YNL209W TRP2P00899 507 aaKnown RBP4.99□□□□□ -1.61
SSB2YNL209W PCK1P10963 549 aa4.99□□□□□ -1.61
SSB2YNL209W DBP5P20449 482 aaKnown RBP4.99□□□□□ -1.61
SSB2YNL209W BRF1P29056 596 aa4.99□□□□□ -1.61
SSB2YNL209W HXT1P32465 570 aa4.99□□□□□ -1.61
SSB2YNL209W ECM32P32644 1121 aaKnown RBP4.99□□□□□ -1.61
SSB2YNL209W RRP1P35178 278 aaPredicted RBP4.99□□□□□ -1.61
SSB2YNL209W MCR1P36060 302 aaKnown RBP4.99□□□□□ -1.61
SSB2YNL209W PTC4P38089 393 aa4.99□□□□□ -1.61
SSB2YNL209W FIS1P40515 155 aa4.99□□□□□ -1.61
SSB2YNL209W REX2P54964 269 aaKnown RBP4.99□□□□□ -1.61
SSB2YNL209W PTA1Q01329 785 aaPredicted RBP4.99□□□□□ -1.61
SSB2YNL209W URH1Q04179 340 aa4.99□□□□□ -1.61
SSB2YNL209W YML082WQ04533 649 aaKnown RBP4.99□□□□□ -1.61
SSB2YNL209W PHM6Q05637 104 aa4.99□□□□□ -1.61
SSB2YNL209W ATG26Q06321 1198 aa4.99□□□□□ -1.61
SSB2YNL209W AVO1Q08236 1176 aa4.99□□□□□ -1.61
SSB2YNL209W DAS2Q12084 232 aa4.99□□□□□ -1.61
SSB2YNL209W APC2Q12440 853 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms