RNA–Protein interactions for RNA: YMR239C

RNT1, Transcript of Nuclear dsRNA-specific ribonuclease (RNase III), yeast

Gene RNT1, Length 1,416 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNT1	YMR239C	SCC2	Q04002	1493 aa		4.27	□□□□□ -1.73
RNT1	YMR239C	HIS5	P07172	385 aa		4.27	□□□□□ -1.73
RNT1	YMR239C	CCC2	P38995	1004 aa		4.27	□□□□□ -1.73
RNT1	YMR239C	PSP2	P50109	593 aa	Known RBP	4.27	□□□□□ -1.73
RNT1	YMR239C	SUN4	P53616	420 aa		4.27	□□□□□ -1.73
RNT1	YMR239C	SRT1	Q03175	343 aa		4.27	□□□□□ -1.73
RNT1	YMR239C	YLL058W	Q12198	575 aa		4.27	□□□□□ -1.73
RNT1	YMR239C	SPP41	P38904	1435 aa		4.27	□□□□□ -1.73
RNT1	YMR239C	PRP9	P19736	530 aa	Known RBP	4.26	□□□□□ -1.73
RNT1	YMR239C	PBY1	P38254	753 aa		4.26	□□□□□ -1.73
RNT1	YMR239C	YBR184W	P38299	523 aa		4.26	□□□□□ -1.73
RNT1	YMR239C	IRR1	P40541	1150 aa		4.26	□□□□□ -1.73
RNT1	YMR239C	IOC3	P43596	787 aa		4.26	□□□□□ -1.73
RNT1	YMR239C	ESP1	Q03018	1630 aa		4.25	□□□□□ -1.73
RNT1	YMR239C	PMA1	P05030	918 aa	Known RBP	4.25	□□□□□ -1.73
RNT1	YMR239C	GRX1	P25373	110 aa	Known RBP	4.25	□□□□□ -1.73
RNT1	YMR239C	FUN30	P31380	1131 aa		4.25	□□□□□ -1.73
RNT1	YMR239C	DCG1	P32460	244 aa		4.25	□□□□□ -1.73
RNT1	YMR239C	CDC12	P32468	407 aa	Known RBP	4.25	□□□□□ -1.73
RNT1	YMR239C	YKL151C	P36059	337 aa		4.25	□□□□□ -1.73
RNT1	YMR239C	ECM21	P38167	1117 aa	Known RBP	4.25	□□□□□ -1.73
RNT1	YMR239C	GIC1	P38785	314 aa		4.25	□□□□□ -1.73
RNT1	YMR239C	VPS4	P52917	437 aa		4.25	□□□□□ -1.73
RNT1	YMR239C	NAN1	Q02931	896 aa	Known RBP	4.25	□□□□□ -1.73
RNT1	YMR239C	NOP58	Q12499	511 aa	Known RBP	4.25	□□□□□ -1.73
RNT1	YMR239C	PDR15	Q04182	1529 aa	Known RBP	4.24	□□□□□ -1.73
RNT1	YMR239C	SPE1	P08432	466 aa		4.24	□□□□□ -1.73
RNT1	YMR239C	HSF1	P10961	833 aa		4.24	□□□□□ -1.73
RNT1	YMR239C	YRO2	P38079	344 aa		4.24	□□□□□ -1.73
RNT1	YMR239C	ALR2	P43553	858 aa		4.24	□□□□□ -1.73
RNT1	YMR239C	SMC3	P47037	1230 aa		4.24	□□□□□ -1.73
RNT1	YMR239C	SLI1	P53304	468 aa		4.24	□□□□□ -1.73
RNT1	YMR239C	GRX3	Q03835	250 aa		4.24	□□□□□ -1.73
RNT1	YMR239C	CDA1	Q06702	301 aa		4.24	□□□□□ -1.73
RNT1	YMR239C	SPO75	Q07798	868 aa		4.24	□□□□□ -1.73
RNT1	YMR239C	OSH2	Q12451	1283 aa		4.24	□□□□□ -1.73
RNT1	YMR239C	CFT1	Q06632	1357 aa	Known RBP	4.24	□□□□□ -1.73
RNT1	YMR239C	ADE8	P04161	214 aa		4.23	□□□□□ -1.73
RNT1	YMR239C	RAD4	P14736	754 aa		4.23	□□□□□ -1.73
RNT1	YMR239C	PFK1	P16861	987 aa	Known RBP	4.23	□□□□□ -1.73
RNT1	YMR239C	RPS0A	P32905	252 aa	Known RBP	4.23	□□□□□ -1.73
RNT1	YMR239C	STE5	P32917	917 aa		4.23	□□□□□ -1.73
RNT1	YMR239C	YER158C	P40095	573 aa		4.23	□□□□□ -1.73
RNT1	YMR239C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
RNT1	YMR239C	TIM54	P47045	478 aa		4.23	□□□□□ -1.73
RNT1	YMR239C	NNF2	P53253	936 aa		4.23	□□□□□ -1.73
RNT1	YMR239C	DOS2	P54858	310 aa		4.23	□□□□□ -1.73
RNT1	YMR239C	ETT1	Q08421	412 aa	Known RBP	4.23	□□□□□ -1.73
RNT1	YMR239C	NUP159	P40477	1460 aa		4.23	□□□□□ -1.73
RNT1	YMR239C	SIN3	P22579	1536 aa		4.23	□□□□□ -1.73
RNT1	YMR239C	MSS4	P38994	779 aa		4.22	□□□□□ -1.73
RNT1	YMR239C	RAD26	P40352	1085 aa		4.22	□□□□□ -1.73
RNT1	YMR239C	CHA4	P43634	648 aa		4.22	□□□□□ -1.73
RNT1	YMR239C	SFB2	P53953	876 aa		4.22	□□□□□ -1.73
RNT1	YMR239C	KIN4	Q01919	800 aa		4.22	□□□□□ -1.73
RNT1	YMR239C	EAF1	Q06337	982 aa		4.22	□□□□□ -1.73
RNT1	YMR239C	UBX5	Q06682	500 aa		4.22	□□□□□ -1.73
RNT1	YMR239C	KCS1	Q12494	1050 aa		4.22	□□□□□ -1.73
RNT1	YMR239C	ARE1	P25628	610 aa		4.21	□□□□□ -1.73
RNT1	YMR239C	SWE1	P32944	819 aa		4.21	□□□□□ -1.73
RNT1	YMR239C	ATG19	P35193	415 aa		4.21	□□□□□ -1.73
RNT1	YMR239C	ERP6	P53198	216 aa		4.21	□□□□□ -1.73
RNT1	YMR239C	PRP3	Q03338	469 aa	Predicted RBP	4.21	□□□□□ -1.73
RNT1	YMR239C	AIM39	Q08223	395 aa		4.21	□□□□□ -1.73
RNT1	YMR239C	NPC2	Q12408	173 aa		4.21	□□□□□ -1.73
RNT1	YMR239C	ROX1	P25042	368 aa		4.21	□□□□□ -1.74
RNT1	YMR239C	CDC11	P32458	415 aa		4.21	□□□□□ -1.74
RNT1	YMR239C	YBR284W	P38150	797 aa		4.21	□□□□□ -1.74
RNT1	YMR239C	EXG2	P52911	562 aa		4.21	□□□□□ -1.74
RNT1	YMR239C	YSH1	Q06224	779 aa	Predicted RBP	4.21	□□□□□ -1.74
RNT1	YMR239C	TOP2	P06786	1428 aa	Known RBP	4.2	□□□□□ -1.74
RNT1	YMR239C	NUP170	P38181	1502 aa		4.2	□□□□□ -1.74
RNT1	YMR239C	CDC48	P25694	835 aa	Known RBP	4.2	□□□□□ -1.74
RNT1	YMR239C	HRR25	P29295	494 aa	Known RBP	4.2	□□□□□ -1.74
RNT1	YMR239C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
RNT1	YMR239C	LTV1	P34078	463 aa		4.2	□□□□□ -1.74
RNT1	YMR239C	NPP2	P39997	493 aa		4.2	□□□□□ -1.74
RNT1	YMR239C	PFD1	P46988	109 aa		4.2	□□□□□ -1.74
RNT1	YMR239C	TAN1	P53072	289 aa	Predicted RBP	4.2	□□□□□ -1.74
RNT1	YMR239C	YGR125W	P53273	1036 aa		4.2	□□□□□ -1.74
RNT1	YMR239C	MDG1	P53885	366 aa		4.2	□□□□□ -1.74
RNT1	YMR239C	CTF4	Q01454	927 aa		4.2	□□□□□ -1.74
RNT1	YMR239C	WHI4	Q07655	649 aa	Known RBP	4.2	□□□□□ -1.74
RNT1	YMR239C	FMP25	Q08023	583 aa		4.2	□□□□□ -1.74
RNT1	YMR239C	HSP60	P19882	572 aa	Known RBP	4.19	□□□□□ -1.74
RNT1	YMR239C	CAD1	P24813	409 aa	Known RBP	4.19	□□□□□ -1.74
RNT1	YMR239C	RPL8B	P29453	256 aa	Known RBP	4.19	□□□□□ -1.74
RNT1	YMR239C	RPC82	P32349	654 aa		4.19	□□□□□ -1.74
RNT1	YMR239C	ERT1	P38140	529 aa		4.19	□□□□□ -1.74
RNT1	YMR239C	SIC1	P38634	284 aa		4.19	□□□□□ -1.74
RNT1	YMR239C	DSN1	P40568	576 aa		4.19	□□□□□ -1.74
RNT1	YMR239C	GYP7	P48365	746 aa		4.19	□□□□□ -1.74
RNT1	YMR239C	RPN7	Q06103	429 aa	Known RBP	4.19	□□□□□ -1.74
RNT1	YMR239C	RFA1	P22336	621 aa	Known RBP	4.18	□□□□□ -1.74
RNT1	YMR239C	NPP1	P25353	742 aa		4.18	□□□□□ -1.74
RNT1	YMR239C	YKR078W	P36158	585 aa	Known RBP	4.18	□□□□□ -1.74
RNT1	YMR239C	TSL1	P38427	1098 aa	Known RBP	4.18	□□□□□ -1.74
RNT1	YMR239C	RAI1	P53063	387 aa	Known RBP	4.18	□□□□□ -1.74
RNT1	YMR239C	NCS6	P53088	359 aa		4.18	□□□□□ -1.74
RNT1	YMR239C	VPS30	Q02948	557 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms