RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeast

Gene ATG16, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG16	YMR159C	GDH3	P39708	457 aa		5.81	□□□□□ -1.48
ATG16	YMR159C	ALG2	P43636	503 aa		5.81	□□□□□ -1.48
ATG16	YMR159C	GCV2	P49095	1034 aa		5.81	□□□□□ -1.48
ATG16	YMR159C	YLR224W	Q05947	369 aa		5.81	□□□□□ -1.48
ATG16	YMR159C	FBP1	P09201	348 aa		5.8	□□□□□ -1.48
ATG16	YMR159C	PHO8	P11491	566 aa		5.8	□□□□□ -1.48
ATG16	YMR159C	YAP6	Q03935	383 aa		5.8	□□□□□ -1.48
ATG16	YMR159C	STE11	P23561	717 aa		5.79	□□□□□ -1.48
ATG16	YMR159C	URA1	P28272	314 aa	Predicted RBP	5.79	□□□□□ -1.48
ATG16	YMR159C	GYP8	P43570	497 aa		5.79	□□□□□ -1.48
ATG16	YMR159C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
ATG16	YMR159C	NOG2	P53742	486 aa	Known RBP	5.79	□□□□□ -1.48
ATG16	YMR159C	HDA1	P53973	706 aa		5.79	□□□□□ -1.48
ATG16	YMR159C	ATP25	Q03153	612 aa		5.79	□□□□□ -1.48
ATG16	YMR159C	CLU1	Q03690	1277 aa	Known RBP	5.79	□□□□□ -1.48
ATG16	YMR159C	TYE7	P33122	291 aa	Predicted RBP	5.78	□□□□□ -1.48
ATG16	YMR159C	HSV2	P50079	448 aa	Predicted RBP	5.78	□□□□□ -1.48
ATG16	YMR159C	MAL11	P53048	616 aa		5.78	□□□□□ -1.48
ATG16	YMR159C	YKR011C	Q02209	353 aa		5.78	□□□□□ -1.48
ATG16	YMR159C	SPC29	P33419	253 aa		5.77	□□□□□ -1.49
ATG16	YMR159C	RRP14	P36080	434 aa	Known RBP	5.77	□□□□□ -1.49
ATG16	YMR159C	FLR1	P38124	548 aa		5.77	□□□□□ -1.49
ATG16	YMR159C	NMD2	P38798	1089 aa	Known RBP	5.77	□□□□□ -1.49
ATG16	YMR159C	NCS6	P53088	359 aa		5.77	□□□□□ -1.49
ATG16	YMR159C	REH1	Q06709	432 aa		5.77	□□□□□ -1.49
ATG16	YMR159C	UPC2	Q12151	913 aa		5.77	□□□□□ -1.49
ATG16	YMR159C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
ATG16	YMR159C	STE14	P32584	239 aa		5.76	□□□□□ -1.49
ATG16	YMR159C	LST4	P34239	828 aa		5.76	□□□□□ -1.49
ATG16	YMR159C	PLB1	P39105	664 aa		5.76	□□□□□ -1.49
ATG16	YMR159C	CEP3	P40969	608 aa		5.76	□□□□□ -1.49
ATG16	YMR159C	ESC8	Q08119	714 aa		5.76	□□□□□ -1.49
ATG16	YMR159C	MDM12	Q92328	271 aa		5.76	□□□□□ -1.49
ATG16	YMR159C	RPS9A	O13516	197 aa	Known RBP	5.75	□□□□□ -1.49
ATG16	YMR159C	RAD53	P22216	821 aa		5.75	□□□□□ -1.49
ATG16	YMR159C	MSH2	P25847	964 aa		5.75	□□□□□ -1.49
ATG16	YMR159C	MNN10	P50108	393 aa	Known RBP	5.75	□□□□□ -1.49
ATG16	YMR159C	RNH70	P53331	553 aa		5.75	□□□□□ -1.49
ATG16	YMR159C	YDR514C	Q04408	483 aa		5.75	□□□□□ -1.49
ATG16	YMR159C	POB3	Q04636	552 aa	Known RBP	5.75	□□□□□ -1.49
ATG16	YMR159C	SSL1	Q04673	461 aa	Predicted RBP	5.75	□□□□□ -1.49
ATG16	YMR159C	WHI4	Q07655	649 aa	Known RBP	5.75	□□□□□ -1.49
ATG16	YMR159C	GUP2	Q08929	609 aa		5.75	□□□□□ -1.49
ATG16	YMR159C	SED4	P25365	1065 aa		5.74	□□□□□ -1.49
ATG16	YMR159C	THI4	P32318	326 aa		5.74	□□□□□ -1.49
ATG16	YMR159C	RPD3	P32561	433 aa		5.74	□□□□□ -1.49
ATG16	YMR159C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
ATG16	YMR159C	SDP1	P40479	209 aa		5.74	□□□□□ -1.49
ATG16	YMR159C	YIL108W	P40483	696 aa	Known RBP	5.74	□□□□□ -1.49
ATG16	YMR159C	UGO1	Q03327	502 aa		5.74	□□□□□ -1.49
ATG16	YMR159C	MET7	Q08645	548 aa		5.74	□□□□□ -1.49
ATG16	YMR159C	KCS1	Q12494	1050 aa		5.74	□□□□□ -1.49
ATG16	YMR159C	MET6	P05694	767 aa	Known RBP	5.73	□□□□□ -1.49
ATG16	YMR159C	DAL7	P21826	554 aa		5.73	□□□□□ -1.49
ATG16	YMR159C	CYS3	P31373	394 aa	Known RBP	5.73	□□□□□ -1.49
ATG16	YMR159C	CTF8	P38877	133 aa		5.73	□□□□□ -1.49
ATG16	YMR159C	TY4A-J	P47023	414 aa		5.73	□□□□□ -1.49
ATG16	YMR159C	EXG2	P52911	562 aa		5.73	□□□□□ -1.49
ATG16	YMR159C	ALG12	P53730	551 aa		5.73	□□□□□ -1.49
ATG16	YMR159C	TMA10	Q06177	86 aa		5.73	□□□□□ -1.49
ATG16	YMR159C	NPC2	Q12408	173 aa		5.73	□□□□□ -1.49
ATG16	YMR159C	DCG1	P32460	244 aa		5.72	□□□□□ -1.49
ATG16	YMR159C	TAD1	P53065	400 aa		5.72	□□□□□ -1.49
ATG16	YMR159C	GSY1	P23337	708 aa		5.71	□□□□□ -1.5
ATG16	YMR159C	PPG1	P32838	368 aa		5.71	□□□□□ -1.5
ATG16	YMR159C	MTC2	P34246	357 aa		5.71	□□□□□ -1.5
ATG16	YMR159C	MCM6	P53091	1017 aa	Known RBP	5.71	□□□□□ -1.5
ATG16	YMR159C	PUS2	P53167	370 aa		5.71	□□□□□ -1.5
ATG16	YMR159C	ENB1	Q08299	606 aa		5.71	□□□□□ -1.5
ATG16	YMR159C	YCR015C	P25616	317 aa		5.7	□□□□□ -1.5
ATG16	YMR159C	CTS1	P29029	562 aa		5.7	□□□□□ -1.5
ATG16	YMR159C	PEX6	P33760	1030 aa		5.7	□□□□□ -1.5
ATG16	YMR159C	TAF1	P46677	1066 aa		5.7	□□□□□ -1.5
ATG16	YMR159C	HXT16	P47185	567 aa		5.7	□□□□□ -1.5
ATG16	YMR159C	ZDS1	P50111	915 aa	Known RBP	5.7	□□□□□ -1.5
ATG16	YMR159C	RSC3	Q06639	885 aa		5.7	□□□□□ -1.5
ATG16	YMR159C	YCL002C	P25565	263 aa		5.69	□□□□□ -1.5
ATG16	YMR159C	GIP4	P39732	760 aa		5.69	□□□□□ -1.5
ATG16	YMR159C	RLP7	P40693	322 aa	Known RBP	5.69	□□□□□ -1.5
ATG16	YMR159C	DUS1	P53759	423 aa	Known RBP	5.69	□□□□□ -1.5
ATG16	YMR159C	LRS4	Q04087	347 aa	Known RBP	5.69	□□□□□ -1.5
ATG16	YMR159C	THI21	Q08975	551 aa		5.69	□□□□□ -1.5
ATG16	YMR159C	HAL9	Q12180	1030 aa		5.69	□□□□□ -1.5
ATG16	YMR159C	YBR182C-A	Q8TGU6	64 aa		5.69	□□□□□ -1.5
ATG16	YMR159C	PRC1	P00729	532 aa		5.68	□□□□□ -1.5
ATG16	YMR159C	PMA1	P05030	918 aa	Known RBP	5.68	□□□□□ -1.5
ATG16	YMR159C	KAR4	P25583	335 aa		5.68	□□□□□ -1.5
ATG16	YMR159C	STO1	P34160	861 aa	Known RBP	5.68	□□□□□ -1.5
ATG16	YMR159C	SHM2	P37291	469 aa	Known RBP	5.68	□□□□□ -1.5
ATG16	YMR159C	YHR078W	P38799	552 aa		5.68	□□□□□ -1.5
ATG16	YMR159C	SET5	P38890	526 aa	Known RBP	5.68	□□□□□ -1.5
ATG16	YMR159C	CAF16	P43569	289 aa		5.68	□□□□□ -1.5
ATG16	YMR159C	YOR022C	Q12204	715 aa		5.68	□□□□□ -1.5
ATG16	YMR159C	AIM44	Q99299	758 aa		5.68	□□□□□ -1.5
ATG16	YMR159C	NTG2	Q08214	380 aa		5.67	□□□□□ -1.5
ATG16	YMR159C	DIF1	O13577	133 aa		5.66	□□□□□ -1.5
ATG16	YMR159C	CDC9	P04819	755 aa		5.66	□□□□□ -1.5
ATG16	YMR159C	MEF1	P25039	761 aa		5.66	□□□□□ -1.5
ATG16	YMR159C	PER1	P25625	357 aa		5.66	□□□□□ -1.5
ATG16	YMR159C	SEC21	P32074	935 aa	Known RBP	5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 175.3 ms