RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W YCK2P23292 546 aaKnown RBP6.14□□□□□ -1.43
VPS36YLR417W URA1P28272 314 aaPredicted RBP6.14□□□□□ -1.43
VPS36YLR417W SEC6P32844 805 aa6.14□□□□□ -1.43
VPS36YLR417W AIM26P32858 118 aa6.14□□□□□ -1.43
VPS36YLR417W SLN1P39928 1220 aaPredicted RBP6.14□□□□□ -1.43
VPS36YLR417W GZF3P42944 551 aaKnown RBP6.14□□□□□ -1.43
VPS36YLR417W AIM14P53109 570 aa6.14□□□□□ -1.43
VPS36YLR417W XYL2Q07993 356 aa6.14□□□□□ -1.43
VPS36YLR417W SPS1P08458 490 aa6.13□□□□□ -1.43
VPS36YLR417W HMG1P12683 1054 aa6.13□□□□□ -1.43
VPS36YLR417W PGM1P33401 570 aaKnown RBP6.13□□□□□ -1.43
VPS36YLR417W RLP7P40693 322 aaKnown RBP6.13□□□□□ -1.43
VPS36YLR417W DUG1P43616 481 aaKnown RBP6.13□□□□□ -1.43
VPS36YLR417W VPS30Q02948 557 aa6.13□□□□□ -1.43
VPS36YLR417W SLX4Q12098 748 aa6.13□□□□□ -1.43
VPS36YLR417W KIN2P13186 1147 aaKnown RBP6.13□□□□□ -1.43
VPS36YLR417W CHS2P14180 963 aa6.13□□□□□ -1.43
VPS36YLR417W COQ2P32378 372 aa6.13□□□□□ -1.43
VPS36YLR417W STE13P33894 931 aa6.13□□□□□ -1.43
VPS36YLR417W HSL7P38274 827 aa6.13□□□□□ -1.43
VPS36YLR417W PTC7P38797 343 aa6.13□□□□□ -1.43
VPS36YLR417W OAF1P39720 1047 aaPredicted RBP6.13□□□□□ -1.43
VPS36YLR417W DOT6P40059 670 aaKnown RBP6.13□□□□□ -1.43
VPS36YLR417W LRS4Q04087 347 aaKnown RBP6.13□□□□□ -1.43
VPS36YLR417W APL1P27351 700 aa6.12□□□□□ -1.43
VPS36YLR417W CYS3P31373 394 aaKnown RBP6.12□□□□□ -1.43
VPS36YLR417W GTS1P40956 396 aa6.12□□□□□ -1.43
VPS36YLR417W PEX14P53112 341 aa6.12□□□□□ -1.43
VPS36YLR417W HDA1P53973 706 aa6.12□□□□□ -1.43
VPS36YLR417W YBR182C-AQ8TGU6 64 aa6.12□□□□□ -1.43
VPS36YLR417W RPS9AO13516 197 aaKnown RBP6.11□□□□□ -1.43
VPS36YLR417W DIF1O13577 133 aa6.11□□□□□ -1.43
VPS36YLR417W YCL002CP25565 263 aa6.11□□□□□ -1.43
VPS36YLR417W CEP3P40969 608 aa6.11□□□□□ -1.43
VPS36YLR417W RAI1P53063 387 aaKnown RBP6.11□□□□□ -1.43
VPS36YLR417W SND1Q04007 877 aa6.11□□□□□ -1.43
VPS36YLR417W SIZ1Q04195 904 aa6.11□□□□□ -1.43
VPS36YLR417W YOR378WQ08902 515 aa6.11□□□□□ -1.43
VPS36YLR417W ATP4P05626 244 aa6.11□□□□□ -1.43
VPS36YLR417W CCR4P31384 837 aaKnown RBP6.11□□□□□ -1.43
VPS36YLR417W TYE7P33122 291 aaPredicted RBP6.11□□□□□ -1.43
VPS36YLR417W ABZ1P37254 787 aaPredicted RBP6.11□□□□□ -1.43
VPS36YLR417W MNN11P46985 422 aaKnown RBP6.11□□□□□ -1.43
VPS36YLR417W ENV11P53246 860 aa6.11□□□□□ -1.43
VPS36YLR417W YKR011CQ02209 353 aa6.11□□□□□ -1.43
VPS36YLR417W MSC2Q03455 724 aa6.11□□□□□ -1.43
VPS36YLR417W RSM24Q03976 319 aa6.11□□□□□ -1.43
VPS36YLR417W YDR338CQ05497 695 aa6.11□□□□□ -1.43
VPS36YLR417W AEP2P22136 580 aa6.1□□□□□ -1.43
VPS36YLR417W MIH1P23748 554 aa6.1□□□□□ -1.43
VPS36YLR417W PLC1P32383 869 aa6.1□□□□□ -1.43
VPS36YLR417W SAP190P36123 1033 aa6.1□□□□□ -1.43
VPS36YLR417W SET5P38890 526 aaKnown RBP6.1□□□□□ -1.43
VPS36YLR417W SHR5P41912 237 aa6.1□□□□□ -1.43
VPS36YLR417W SSY1Q03770 852 aa6.1□□□□□ -1.43
VPS36YLR417W YPR053CQ6Q5F3 151 aa6.1□□□□□ -1.43
VPS36YLR417W HSF1P10961 833 aa6.09□□□□□ -1.43
VPS36YLR417W ADP1P25371 1049 aa6.09□□□□□ -1.43
VPS36YLR417W DID4P36108 232 aa6.09□□□□□ -1.43
VPS36YLR417W CCT5P40413 562 aaKnown RBP6.09□□□□□ -1.43
VPS36YLR417W RET2P43621 546 aa6.09□□□□□ -1.43
VPS36YLR417W PHM7Q12252 991 aa6.09□□□□□ -1.43
VPS36YLR417W YLR122CQ12312 125 aa6.09□□□□□ -1.43
VPS36YLR417W SKN7P38889 622 aa6.08□□□□□ -1.44
VPS36YLR417W PMC1P38929 1173 aaPredicted RBP6.08□□□□□ -1.44
VPS36YLR417W PEA2P40091 420 aa6.08□□□□□ -1.44
VPS36YLR417W DAS1P47005 663 aa6.08□□□□□ -1.44
VPS36YLR417W NIT2P47016 307 aa6.08□□□□□ -1.44
VPS36YLR417W TGL2P54857 326 aa6.08□□□□□ -1.44
VPS36YLR417W YPL034WQ03083 165 aa6.08□□□□□ -1.44
VPS36YLR417W RIB2Q12362 591 aaKnown RBP6.08□□□□□ -1.44
VPS36YLR417W KAE1P36132 386 aa6.08□□□□□ -1.44
VPS36YLR417W GPP2P40106 250 aaKnown RBP6.08□□□□□ -1.44
VPS36YLR417W YGR153WP48238 217 aa6.08□□□□□ -1.44
VPS36YLR417W UBC9P50623 157 aaPredicted RBP6.08□□□□□ -1.44
VPS36YLR417W NPY1P53164 384 aa6.08□□□□□ -1.44
VPS36YLR417W CDA1Q06702 301 aa6.08□□□□□ -1.44
VPS36YLR417W PRC1P00729 532 aa6.07□□□□□ -1.44
VPS36YLR417W SRP101P32916 621 aa6.07□□□□□ -1.44
VPS36YLR417W TDA3P38758 523 aa6.07□□□□□ -1.44
VPS36YLR417W FOL2P51601 243 aaKnown RBP6.07□□□□□ -1.44
VPS36YLR417W YGR012WP53206 393 aa6.07□□□□□ -1.44
VPS36YLR417W THI21Q08975 551 aa6.07□□□□□ -1.44
VPS36YLR417W RMP1Q12530 201 aa6.07□□□□□ -1.44
VPS36YLR417W ENA1P13587 1091 aa6.06□□□□□ -1.44
VPS36YLR417W TFC4P33339 1025 aa6.06□□□□□ -1.44
VPS36YLR417W YFL052WP43551 465 aa6.06□□□□□ -1.44
VPS36YLR417W BNA2P47125 453 aa6.06□□□□□ -1.44
VPS36YLR417W PUS2P53167 370 aa6.06□□□□□ -1.44
VPS36YLR417W SUB1P54000 292 aaKnown RBP6.06□□□□□ -1.44
VPS36YLR417W ENA2Q01896 1091 aa6.06□□□□□ -1.44
VPS36YLR417W ECM9Q02202 377 aa6.06□□□□□ -1.44
VPS36YLR417W CRR1Q05790 422 aa6.06□□□□□ -1.44
VPS36YLR417W YOR022CQ12204 715 aa6.06□□□□□ -1.44
VPS36YLR417W NYV1Q12255 253 aa6.06□□□□□ -1.44
VPS36YLR417W ENA5Q12691 1091 aa6.06□□□□□ -1.44
VPS36YLR417W PWP2P25635 923 aaKnown RBP6.05□□□□□ -1.44
VPS36YLR417W HIR1P32479 840 aa6.05□□□□□ -1.44
VPS36YLR417W RPD3P32561 433 aa6.05□□□□□ -1.44
VPS36YLR417W YIL108WP40483 696 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms