RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	YBR238C	P38330	731 aa	Known RBP	4.64	□□□□□ -1.67
CST9	YLR394W	GDH3	P39708	457 aa		4.64	□□□□□ -1.67
CST9	YLR394W	KIN4	Q01919	800 aa		4.64	□□□□□ -1.67
CST9	YLR394W	NOP12	Q08208	459 aa	Known RBP	4.64	□□□□□ -1.67
CST9	YLR394W	OSW2	Q12202	724 aa		4.64	□□□□□ -1.67
CST9	YLR394W	RRP14	P36080	434 aa	Known RBP	4.63	□□□□□ -1.67
CST9	YLR394W	YKR078W	P36158	585 aa	Known RBP	4.63	□□□□□ -1.67
CST9	YLR394W	NMD2	P38798	1089 aa	Known RBP	4.63	□□□□□ -1.67
CST9	YLR394W	MSS4	P38994	779 aa		4.63	□□□□□ -1.67
CST9	YLR394W	YER158C	P40095	573 aa		4.63	□□□□□ -1.67
CST9	YLR394W	MND2	P40577	368 aa		4.63	□□□□□ -1.67
CST9	YLR394W	TY4A-J	P47023	414 aa		4.63	□□□□□ -1.67
CST9	YLR394W	TOM70	P07213	617 aa	Known RBP	4.63	□□□□□ -1.67
CST9	YLR394W	REC104	P33323	182 aa		4.63	□□□□□ -1.67
CST9	YLR394W	GYP8	P43570	497 aa		4.63	□□□□□ -1.67
CST9	YLR394W	OSW7	P43611	510 aa		4.63	□□□□□ -1.67
CST9	YLR394W	TPO2	P53283	614 aa		4.63	□□□□□ -1.67
CST9	YLR394W	ENV7	Q12003	364 aa		4.63	□□□□□ -1.67
CST9	YLR394W	CDC48	P25694	835 aa	Known RBP	4.62	□□□□□ -1.67
CST9	YLR394W	PPG1	P32838	368 aa		4.62	□□□□□ -1.67
CST9	YLR394W	ADY3	Q07732	790 aa		4.62	□□□□□ -1.67
CST9	YLR394W	TPO1	Q07824	586 aa		4.62	□□□□□ -1.67
CST9	YLR394W	YLR125W	Q12138	136 aa		4.62	□□□□□ -1.67
CST9	YLR394W	MSH2	P25847	964 aa		4.61	□□□□□ -1.67
CST9	YLR394W	THI4	P32318	326 aa		4.61	□□□□□ -1.67
CST9	YLR394W	PLB1	P39105	664 aa		4.61	□□□□□ -1.67
CST9	YLR394W	CCM1	P48237	864 aa	Predicted RBP	4.61	□□□□□ -1.67
CST9	YLR394W	HSV2	P50079	448 aa	Predicted RBP	4.61	□□□□□ -1.67
CST9	YLR394W	YGR283C	P53336	341 aa	Predicted RBP	4.61	□□□□□ -1.67
CST9	YLR394W	CDA1	Q06702	301 aa		4.61	□□□□□ -1.67
CST9	YLR394W	MET6	P05694	767 aa	Known RBP	4.6	□□□□□ -1.67
CST9	YLR394W	MEF1	P25039	761 aa		4.6	□□□□□ -1.67
CST9	YLR394W	SRP101	P32916	621 aa		4.6	□□□□□ -1.67
CST9	YLR394W	ZRG8	P40021	1076 aa		4.6	□□□□□ -1.67
CST9	YLR394W	MET12	P46151	657 aa		4.6	□□□□□ -1.67
CST9	YLR394W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
CST9	YLR394W	ALG2	P43636	503 aa		4.59	□□□□□ -1.67
CST9	YLR394W	NOT3	P06102	836 aa	Known RBP	4.58	□□□□□ -1.68
CST9	YLR394W	HIS5	P07172	385 aa		4.58	□□□□□ -1.68
CST9	YLR394W	SPC29	P33419	253 aa		4.58	□□□□□ -1.68
CST9	YLR394W	SPC42	P36094	363 aa		4.58	□□□□□ -1.68
CST9	YLR394W	POA1	P38218	177 aa		4.58	□□□□□ -1.68
CST9	YLR394W	HDA1	P53973	706 aa		4.58	□□□□□ -1.68
CST9	YLR394W	YPR196W	Q06595	470 aa		4.58	□□□□□ -1.68
CST9	YLR394W	NTG2	Q08214	380 aa		4.58	□□□□□ -1.68
CST9	YLR394W	MDM12	Q92328	271 aa		4.58	□□□□□ -1.68
CST9	YLR394W	ENA1	P13587	1091 aa		4.57	□□□□□ -1.68
CST9	YLR394W	OAR1	P35731	278 aa		4.57	□□□□□ -1.68
CST9	YLR394W	EMC3	P36039	253 aa		4.57	□□□□□ -1.68
CST9	YLR394W	CHA4	P43634	648 aa		4.57	□□□□□ -1.68
CST9	YLR394W	YGR012W	P53206	393 aa		4.57	□□□□□ -1.68
CST9	YLR394W	ENA2	Q01896	1091 aa		4.57	□□□□□ -1.68
CST9	YLR394W	SSL1	Q04673	461 aa	Predicted RBP	4.57	□□□□□ -1.68
CST9	YLR394W	ENA5	Q12691	1091 aa		4.57	□□□□□ -1.68
CST9	YLR394W	RPC82	P32349	654 aa		4.56	□□□□□ -1.68
CST9	YLR394W	RPD3	P32561	433 aa		4.56	□□□□□ -1.68
CST9	YLR394W	WHI4	Q07655	649 aa	Known RBP	4.56	□□□□□ -1.68
CST9	YLR394W	HSF1	P10961	833 aa		4.55	□□□□□ -1.68
CST9	YLR394W	YCL002C	P25565	263 aa		4.55	□□□□□ -1.68
CST9	YLR394W	STE13	P33894	931 aa		4.55	□□□□□ -1.68
CST9	YLR394W	MOH1	P38191	138 aa		4.55	□□□□□ -1.68
CST9	YLR394W	MNN1	P39106	762 aa		4.55	□□□□□ -1.68
CST9	YLR394W	EXG2	P52911	562 aa		4.55	□□□□□ -1.68
CST9	YLR394W	RAI1	P53063	387 aa	Known RBP	4.55	□□□□□ -1.68
CST9	YLR394W	DOS2	P54858	310 aa		4.55	□□□□□ -1.68
CST9	YLR394W	AIM44	Q99299	758 aa		4.55	□□□□□ -1.68
CST9	YLR394W	CDC9	P04819	755 aa		4.55	□□□□□ -1.68
CST9	YLR394W	FBP1	P09201	348 aa		4.55	□□□□□ -1.68
CST9	YLR394W	MPH2	P0CD99	609 aa		4.55	□□□□□ -1.68
CST9	YLR394W	PEX6	P33760	1030 aa		4.55	□□□□□ -1.68
CST9	YLR394W	BRN1	P38170	754 aa		4.55	□□□□□ -1.68
CST9	YLR394W	HXT16	P47185	567 aa		4.55	□□□□□ -1.68
CST9	YLR394W	DNM1	P54861	757 aa		4.55	□□□□□ -1.68
CST9	YLR394W	ATP25	Q03153	612 aa		4.55	□□□□□ -1.68
CST9	YLR394W	UGO1	Q03327	502 aa		4.55	□□□□□ -1.68
CST9	YLR394W	LRS4	Q04087	347 aa	Known RBP	4.55	□□□□□ -1.68
CST9	YLR394W	MET7	Q08645	548 aa		4.55	□□□□□ -1.68
CST9	YLR394W	KCS1	Q12494	1050 aa		4.55	□□□□□ -1.68
CST9	YLR394W	SPE1	P08432	466 aa		4.54	□□□□□ -1.68
CST9	YLR394W	DAL7	P21826	554 aa		4.54	□□□□□ -1.68
CST9	YLR394W	URA1	P28272	314 aa	Predicted RBP	4.54	□□□□□ -1.68
CST9	YLR394W	MTC2	P34246	357 aa		4.54	□□□□□ -1.68
CST9	YLR394W	TAD1	P53065	400 aa		4.54	□□□□□ -1.68
CST9	YLR394W	POB3	Q04636	552 aa	Known RBP	4.54	□□□□□ -1.68
CST9	YLR394W	AIM39	Q08223	395 aa		4.54	□□□□□ -1.68
CST9	YLR394W	RFA1	P22336	621 aa	Known RBP	4.53	□□□□□ -1.68
CST9	YLR394W	VBA3	P25594	458 aa		4.53	□□□□□ -1.68
CST9	YLR394W	PER1	P25625	357 aa		4.53	□□□□□ -1.68
CST9	YLR394W	HRR25	P29295	494 aa	Known RBP	4.53	□□□□□ -1.68
CST9	YLR394W	CEP3	P40969	608 aa		4.53	□□□□□ -1.68
CST9	YLR394W	DAM1	P53267	343 aa		4.53	□□□□□ -1.68
CST9	YLR394W	YKR011C	Q02209	353 aa		4.53	□□□□□ -1.68
CST9	YLR394W	RSC3	Q06639	885 aa		4.53	□□□□□ -1.68
CST9	YLR394W	NOP14	Q99207	810 aa	Known RBP	4.53	□□□□□ -1.68
CST9	YLR394W	PFK1	P16861	987 aa	Known RBP	4.52	□□□□□ -1.69
CST9	YLR394W	RPL8A	P17076	256 aa	Known RBP	4.52	□□□□□ -1.69
CST9	YLR394W	STE14	P32584	239 aa		4.52	□□□□□ -1.69
CST9	YLR394W	YJR142W	P47173	342 aa		4.52	□□□□□ -1.69
CST9	YLR394W	UBA2	P52488	636 aa		4.52	□□□□□ -1.69
CST9	YLR394W	TFB2	Q02939	513 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms