RNA–Protein interactions for RNA: YLR224W

YLR224W, Transcript of F-box protein and component of SCF ubiquitin ligase complexes, yeast

Gene YLR224W, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR224W	YLR224W	YOR131C	Q12486	218 aa		4.14	□□□□□ -1.75
YLR224W	YLR224W	HBN1	Q96VH4	193 aa		4.14	□□□□□ -1.75
YLR224W	YLR224W	TAD3	Q9URQ3	322 aa		4.14	□□□□□ -1.75
YLR224W	YLR224W	YTA7	P40340	1379 aa		4.14	□□□□□ -1.75
YLR224W	YLR224W	CIT1	P00890	479 aa		4.13	□□□□□ -1.75
YLR224W	YLR224W	ADE8	P04161	214 aa		4.13	□□□□□ -1.75
YLR224W	YLR224W	PFK1	P16861	987 aa	Known RBP	4.13	□□□□□ -1.75
YLR224W	YLR224W	RPC82	P32349	654 aa		4.13	□□□□□ -1.75
YLR224W	YLR224W	RPD3	P32561	433 aa		4.13	□□□□□ -1.75
YLR224W	YLR224W	YKR078W	P36158	585 aa	Known RBP	4.13	□□□□□ -1.75
YLR224W	YLR224W	GAL11	P19659	1081 aa		4.12	□□□□□ -1.75
YLR224W	YLR224W	YKL091C	P33324	310 aa	Known RBP	4.12	□□□□□ -1.75
YLR224W	YLR224W	BET3	P36149	193 aa		4.12	□□□□□ -1.75
YLR224W	YLR224W	GGA2	P38817	585 aa	Known RBP	4.12	□□□□□ -1.75
YLR224W	YLR224W	HUL4	P40985	892 aa		4.12	□□□□□ -1.75
YLR224W	YLR224W	YKE2	P52553	114 aa		4.12	□□□□□ -1.75
YLR224W	YLR224W	RTA1	P53047	317 aa		4.12	□□□□□ -1.75
YLR224W	YLR224W	RPN4	Q03465	531 aa		4.12	□□□□□ -1.75
YLR224W	YLR224W	YDL124W	Q07551	312 aa	Known RBP	4.12	□□□□□ -1.75
YLR224W	YLR224W	CDC48	P25694	835 aa	Known RBP	4.11	□□□□□ -1.75
YLR224W	YLR224W	YBR238C	P38330	731 aa	Known RBP	4.11	□□□□□ -1.75
YLR224W	YLR224W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
YLR224W	YLR224W	TAF8	Q03750	510 aa		4.11	□□□□□ -1.75
YLR224W	YLR224W	LCD1	Q04377	747 aa		4.11	□□□□□ -1.75
YLR224W	YLR224W	YLR040C	Q07988	224 aa		4.11	□□□□□ -1.75
YLR224W	YLR224W	NOT3	P06102	836 aa	Known RBP	4.1	□□□□□ -1.75
YLR224W	YLR224W	PET10	P36139	283 aa		4.1	□□□□□ -1.75
YLR224W	YLR224W	RSP5	P39940	809 aa	Known RBP	4.1	□□□□□ -1.75
YLR224W	YLR224W	CCM1	P48237	864 aa	Predicted RBP	4.1	□□□□□ -1.75
YLR224W	YLR224W	FPR4	Q06205	392 aa	Predicted RBP	4.1	□□□□□ -1.75
YLR224W	YLR224W	CAN1	P04817	590 aa		4.09	□□□□□ -1.75
YLR224W	YLR224W	CAD1	P24813	409 aa	Known RBP	4.09	□□□□□ -1.75
YLR224W	YLR224W	CHZ1	P40019	153 aa	Predicted RBP	4.09	□□□□□ -1.75
YLR224W	YLR224W	ERG5	P54781	538 aa		4.09	□□□□□ -1.75
YLR224W	YLR224W	AIM39	Q08223	395 aa		4.09	□□□□□ -1.75
YLR224W	YLR224W	PPM2	Q08282	695 aa		4.09	□□□□□ -1.75
YLR224W	YLR224W	RPP2A	P05319	106 aa	Known RBP	4.08	□□□□□ -1.76
YLR224W	YLR224W	ERR1	P0CX10	437 aa		4.08	□□□□□ -1.76
YLR224W	YLR224W	ERR2	P0CX11	437 aa		4.08	□□□□□ -1.76
YLR224W	YLR224W	RAD53	P22216	821 aa		4.08	□□□□□ -1.76
YLR224W	YLR224W	REC104	P33323	182 aa		4.08	□□□□□ -1.76
YLR224W	YLR224W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
YLR224W	YLR224W	PSP2	P50109	593 aa	Known RBP	4.08	□□□□□ -1.76
YLR224W	YLR224W	RAI1	P53063	387 aa	Known RBP	4.08	□□□□□ -1.76
YLR224W	YLR224W	ORC1	P54784	914 aa	Predicted RBP	4.08	□□□□□ -1.76
YLR224W	YLR224W	TOM70	P07213	617 aa	Known RBP	4.07	□□□□□ -1.76
YLR224W	YLR224W	FBP1	P09201	348 aa		4.07	□□□□□ -1.76
YLR224W	YLR224W	UBP6	P43593	499 aa	Known RBP	4.07	□□□□□ -1.76
YLR224W	YLR224W	OSW7	P43611	510 aa		4.07	□□□□□ -1.76
YLR224W	YLR224W	ENB1	Q08299	606 aa		4.07	□□□□□ -1.76
YLR224W	YLR224W	SEC21	P32074	935 aa	Known RBP	4.06	□□□□□ -1.76
YLR224W	YLR224W	EFT1	P32324	842 aa	Known RBP	4.06	□□□□□ -1.76
YLR224W	YLR224W	TIM23	P32897	222 aa		4.06	□□□□□ -1.76
YLR224W	YLR224W	STE13	P33894	931 aa		4.06	□□□□□ -1.76
YLR224W	YLR224W	MOH1	P38191	138 aa		4.06	□□□□□ -1.76
YLR224W	YLR224W	BUD6	P41697	788 aa		4.06	□□□□□ -1.76
YLR224W	YLR224W	GYP8	P43570	497 aa		4.06	□□□□□ -1.76
YLR224W	YLR224W	HDA1	P53973	706 aa		4.06	□□□□□ -1.76
YLR224W	YLR224W	YOL073C	Q08232	322 aa		4.06	□□□□□ -1.76
YLR224W	YLR224W	ENV7	Q12003	364 aa		4.06	□□□□□ -1.76
YLR224W	YLR224W	SED4	P25365	1065 aa		4.05	□□□□□ -1.76
YLR224W	YLR224W	URA1	P28272	314 aa	Predicted RBP	4.05	□□□□□ -1.76
YLR224W	YLR224W	ATG19	P35193	415 aa		4.05	□□□□□ -1.76
YLR224W	YLR224W	SUL1	P38359	859 aa		4.05	□□□□□ -1.76
YLR224W	YLR224W	CEP3	P40969	608 aa		4.05	□□□□□ -1.76
YLR224W	YLR224W	YMR206W	Q03695	313 aa		4.05	□□□□□ -1.76
YLR224W	YLR224W	MPH2	P0CD99	609 aa		4.04	□□□□□ -1.76
YLR224W	YLR224W	PRP4	P20053	465 aa	Known RBP	4.04	□□□□□ -1.76
YLR224W	YLR224W	RFA1	P22336	621 aa	Known RBP	4.04	□□□□□ -1.76
YLR224W	YLR224W	ERG4	P25340	473 aa		4.04	□□□□□ -1.76
YLR224W	YLR224W	NUP82	P40368	713 aa		4.04	□□□□□ -1.76
YLR224W	YLR224W	YIL108W	P40483	696 aa	Known RBP	4.04	□□□□□ -1.76
YLR224W	YLR224W	NIT3	P49954	291 aa		4.04	□□□□□ -1.76
YLR224W	YLR224W	MUK1	Q02866	612 aa		4.04	□□□□□ -1.76
YLR224W	YLR224W	VPS30	Q02948	557 aa		4.04	□□□□□ -1.76
YLR224W	YLR224W	YLR125W	Q12138	136 aa		4.04	□□□□□ -1.76
YLR224W	YLR224W	CIT2	P08679	460 aa		4.03	□□□□□ -1.76
YLR224W	YLR224W	YCL002C	P25565	263 aa		4.03	□□□□□ -1.76
YLR224W	YLR224W	ALG2	P43636	503 aa		4.03	□□□□□ -1.76
YLR224W	YLR224W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
YLR224W	YLR224W	STB4	P50104	949 aa		4.03	□□□□□ -1.76
YLR224W	YLR224W	MRPS35	P53292	345 aa		4.03	□□□□□ -1.76
YLR224W	YLR224W	GUP2	Q08929	609 aa		4.03	□□□□□ -1.76
YLR224W	YLR224W	TRP4	P07285	380 aa	Predicted RBP	4.02	□□□□□ -1.77
YLR224W	YLR224W	TUB3	P09734	445 aa	Known RBP	4.02	□□□□□ -1.77
YLR224W	YLR224W	PHO8	P11491	566 aa		4.02	□□□□□ -1.77
YLR224W	YLR224W	OAR1	P35731	278 aa		4.02	□□□□□ -1.77
YLR224W	YLR224W	YPT53	P36019	220 aa		4.02	□□□□□ -1.77
YLR224W	YLR224W	EMC3	P36039	253 aa		4.02	□□□□□ -1.77
YLR224W	YLR224W	SDP1	P40479	209 aa		4.02	□□□□□ -1.77
YLR224W	YLR224W	TY4A-J	P47023	414 aa		4.02	□□□□□ -1.77
YLR224W	YLR224W	YKR011C	Q02209	353 aa		4.02	□□□□□ -1.77
YLR224W	YLR224W	LRS4	Q04087	347 aa	Known RBP	4.02	□□□□□ -1.77
YLR224W	YLR224W	RPS9A	O13516	197 aa	Known RBP	4.01	□□□□□ -1.77
YLR224W	YLR224W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
YLR224W	YLR224W	TYE7	P33122	291 aa	Predicted RBP	4.01	□□□□□ -1.77
YLR224W	YLR224W	DAM1	P53267	343 aa		4.01	□□□□□ -1.77
YLR224W	YLR224W	YGR283C	P53336	341 aa	Predicted RBP	4.01	□□□□□ -1.77
YLR224W	YLR224W	TMN2	Q04562	672 aa		4.01	□□□□□ -1.77
YLR224W	YLR224W	YOR022C	Q12204	715 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms