RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeast

Gene PBA1, Length 831 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBA1	YLR199C	GAL10	P04397	699 aa		4.17	□□□□□ -1.74
PBA1	YLR199C	HEM13	P11353	328 aa	Known RBP	4.17	□□□□□ -1.74
PBA1	YLR199C	MEF1	P25039	761 aa		4.17	□□□□□ -1.74
PBA1	YLR199C	RPN12	P32496	274 aa		4.17	□□□□□ -1.74
PBA1	YLR199C	MOT2	P34909	587 aa	Known RBP	4.17	□□□□□ -1.74
PBA1	YLR199C	BAP2	P38084	609 aa		4.17	□□□□□ -1.74
PBA1	YLR199C	PEA2	P40091	420 aa		4.17	□□□□□ -1.74
PBA1	YLR199C	SDA1	P53313	767 aa	Known RBP	4.17	□□□□□ -1.74
PBA1	YLR199C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
PBA1	YLR199C	RKM2	Q03942	479 aa		4.17	□□□□□ -1.74
PBA1	YLR199C	YLR001C	Q07895	862 aa		4.17	□□□□□ -1.74
PBA1	YLR199C	RSB1	Q08417	382 aa		4.17	□□□□□ -1.74
PBA1	YLR199C	SPO21	Q12411	609 aa		4.17	□□□□□ -1.74
PBA1	YLR199C	MPD2	Q99316	277 aa		4.17	□□□□□ -1.74
PBA1	YLR199C	PMA1	P05030	918 aa	Known RBP	4.16	□□□□□ -1.74
PBA1	YLR199C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
PBA1	YLR199C	CDC6	P09119	513 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	INO1	P11986	533 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	PGI1	P12709	554 aa	Known RBP	4.16	□□□□□ -1.74
PBA1	YLR199C	CMP2	P14747	604 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	EUG1	P32474	517 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	MKK2	P32491	506 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	MFT1	P33441	392 aa	Known RBP	4.16	□□□□□ -1.74
PBA1	YLR199C	DSS1	P39112	969 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	MBP1	P39678	833 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	ENT3	P47160	408 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	PEX14	P53112	341 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	TNA1	P53322	534 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	YNL034W	P53963	612 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	YNL018C	P53976	612 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	KIN4	Q01919	800 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	ENT2	Q05785	613 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	MDM12	Q92328	271 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	HBN1	Q96VH4	193 aa		4.16	□□□□□ -1.74
PBA1	YLR199C	SST2	P11972	698 aa	Known RBP	4.15	□□□□□ -1.75
PBA1	YLR199C	DEF1	P35732	738 aa	Known RBP	4.15	□□□□□ -1.75
PBA1	YLR199C	CCC2	P38995	1004 aa		4.15	□□□□□ -1.75
PBA1	YLR199C	PIK1	P39104	1066 aa		4.15	□□□□□ -1.75
PBA1	YLR199C	UBX4	P54730	416 aa		4.15	□□□□□ -1.75
PBA1	YLR199C	ROD1	Q02805	837 aa		4.15	□□□□□ -1.75
PBA1	YLR199C	RSM24	Q03976	319 aa		4.15	□□□□□ -1.75
PBA1	YLR199C	TOM70	P07213	617 aa	Known RBP	4.14	□□□□□ -1.75
PBA1	YLR199C	TOP3	P13099	656 aa		4.14	□□□□□ -1.75
PBA1	YLR199C	KIP1	P28742	1111 aa		4.14	□□□□□ -1.75
PBA1	YLR199C	PLC1	P32383	869 aa		4.14	□□□□□ -1.75
PBA1	YLR199C	HBS1	P32769	611 aa	Known RBP	4.14	□□□□□ -1.75
PBA1	YLR199C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
PBA1	YLR199C	TYS1	P36421	394 aa	Known RBP	4.14	□□□□□ -1.75
PBA1	YLR199C	RDH54	P38086	958 aa		4.14	□□□□□ -1.75
PBA1	YLR199C	VID27	P40157	782 aa		4.14	□□□□□ -1.75
PBA1	YLR199C	PIP2	P52960	996 aa		4.14	□□□□□ -1.75
PBA1	YLR199C	PBP1	P53297	722 aa	Known RBP	4.14	□□□□□ -1.75
PBA1	YLR199C	HOS3	Q02959	697 aa	Known RBP	4.14	□□□□□ -1.75
PBA1	YLR199C	TIF35	Q04067	274 aa	Known RBP	4.14	□□□□□ -1.75
PBA1	YLR199C	HFD1	Q04458	532 aa		4.14	□□□□□ -1.75
PBA1	YLR199C	TRE2	Q08693	809 aa		4.14	□□□□□ -1.75
PBA1	YLR199C	RKM4	Q12504	494 aa		4.14	□□□□□ -1.75
PBA1	YLR199C	GSY1	P23337	708 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	VBA3	P25594	458 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	TFC4	P33339	1025 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	ADD66	P36040	267 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	TRZ1	P36159	838 aa	Predicted RBP	4.13	□□□□□ -1.75
PBA1	YLR199C	MSS4	P38994	779 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	GPB2	P39717	880 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	MGS1	P40151	587 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	RPT2	P40327	437 aa	Known RBP	4.13	□□□□□ -1.75
PBA1	YLR199C	YGL176C	P46945	554 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	SPC105	P53148	917 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	ESF2	P53743	316 aa	Known RBP	4.13	□□□□□ -1.75
PBA1	YLR199C	MET14	Q02196	202 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	YAP6	Q03935	383 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	YPL066W	Q12194	479 aa		4.13	□□□□□ -1.75
PBA1	YLR199C	DED1	P06634	604 aa	Known RBP	4.12	□□□□□ -1.75
PBA1	YLR199C	SNF5	P18480	905 aa		4.12	□□□□□ -1.75
PBA1	YLR199C	SYP1	P25623	870 aa	Known RBP	4.12	□□□□□ -1.75
PBA1	YLR199C	DCG1	P32460	244 aa		4.12	□□□□□ -1.75
PBA1	YLR199C	YKL107W	P34251	309 aa		4.12	□□□□□ -1.75
PBA1	YLR199C	YBR284W	P38150	797 aa		4.12	□□□□□ -1.75
PBA1	YLR199C	VPS62	P53285	467 aa		4.12	□□□□□ -1.75
PBA1	YLR199C	MTQ2	Q03920	221 aa	Predicted RBP	4.12	□□□□□ -1.75
PBA1	YLR199C	YLR224W	Q05947	369 aa		4.12	□□□□□ -1.75
PBA1	YLR199C	GAL1	P04385	528 aa		4.11	□□□□□ -1.75
PBA1	YLR199C	MRS6	P32864	603 aa	Known RBP	4.11	□□□□□ -1.75
PBA1	YLR199C	RFC5	P38251	354 aa		4.11	□□□□□ -1.75
PBA1	YLR199C	UBP6	P43593	499 aa	Known RBP	4.11	□□□□□ -1.75
PBA1	YLR199C	EST2	Q06163	884 aa		4.11	□□□□□ -1.75
PBA1	YLR199C	ECM5	Q03214	1411 aa		4.11	□□□□□ -1.75
PBA1	YLR199C	MPH2	P0CD99	609 aa		4.1	□□□□□ -1.75
PBA1	YLR199C	MSD1	P15179	658 aa	Known RBP	4.1	□□□□□ -1.75
PBA1	YLR199C	DBP5	P20449	482 aa	Known RBP	4.1	□□□□□ -1.75
PBA1	YLR199C	PTP2	P29461	750 aa		4.1	□□□□□ -1.75
PBA1	YLR199C	OAR1	P35731	278 aa		4.1	□□□□□ -1.75
PBA1	YLR199C	SNM1	P40993	198 aa		4.1	□□□□□ -1.75
PBA1	YLR199C	IES1	P43579	692 aa		4.1	□□□□□ -1.75
PBA1	YLR199C	CNN1	P43618	361 aa		4.1	□□□□□ -1.75
PBA1	YLR199C	MET13	P53128	600 aa		4.1	□□□□□ -1.75
PBA1	YLR199C	RAT1	Q02792	1006 aa	Known RBP	4.1	□□□□□ -1.75
PBA1	YLR199C	RIB2	Q12362	591 aa	Known RBP	4.1	□□□□□ -1.75
PBA1	YLR199C	ERP4	Q12450	207 aa		4.1	□□□□□ -1.75
PBA1	YLR199C	CDC9	P04819	755 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms