RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS22	YKL193C	RIX1	P38883	763 aa	Predicted RBP	4.96	□□□□□ -1.62
SDS22	YKL193C	CTF13	P35203	478 aa		4.95	□□□□□ -1.62
SDS22	YKL193C	GYP7	P48365	746 aa		4.95	□□□□□ -1.62
SDS22	YKL193C	HOF1	Q05080	669 aa		4.95	□□□□□ -1.62
SDS22	YKL193C	COQ11	Q05892	277 aa		4.95	□□□□□ -1.62
SDS22	YKL193C	ICT1	Q12385	394 aa		4.95	□□□□□ -1.62
SDS22	YKL193C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SDS22	YKL193C	VBA5	P36172	582 aa		4.94	□□□□□ -1.62
SDS22	YKL193C	MBP1	P39678	833 aa		4.94	□□□□□ -1.62
SDS22	YKL193C	TAH11	P47112	604 aa		4.94	□□□□□ -1.62
SDS22	YKL193C	ADY4	Q05955	493 aa		4.94	□□□□□ -1.62
SDS22	YKL193C	YAP7	Q08182	245 aa		4.94	□□□□□ -1.62
SDS22	YKL193C	SSF2	Q12153	453 aa	Predicted RBP	4.94	□□□□□ -1.62
SDS22	YKL193C	FBP1	P09201	348 aa		4.93	□□□□□ -1.62
SDS22	YKL193C	TUB1	P09733	447 aa	Known RBP	4.93	□□□□□ -1.62
SDS22	YKL193C	SNF7	P39929	240 aa	Known RBP	4.93	□□□□□ -1.62
SDS22	YKL193C	ELO3	P40319	345 aa		4.93	□□□□□ -1.62
SDS22	YKL193C	KRI1	P42846	591 aa	Known RBP	4.93	□□□□□ -1.62
SDS22	YKL193C	SHE9	Q04172	456 aa		4.93	□□□□□ -1.62
SDS22	YKL193C	YPR196W	Q06595	470 aa		4.93	□□□□□ -1.62
SDS22	YKL193C	TUB3	P09734	445 aa	Known RBP	4.92	□□□□□ -1.62
SDS22	YKL193C	TSL1	P38427	1098 aa	Known RBP	4.92	□□□□□ -1.62
SDS22	YKL193C	SPF1	P39986	1215 aa	Known RBP	4.92	□□□□□ -1.62
SDS22	YKL193C	DAS1	P47005	663 aa		4.92	□□□□□ -1.62
SDS22	YKL193C	TDA5	Q06417	326 aa	Known RBP	4.92	□□□□□ -1.62
SDS22	YKL193C	NOT3	P06102	836 aa	Known RBP	4.91	□□□□□ -1.62
SDS22	YKL193C	GFA1	P14742	717 aa	Known RBP	4.91	□□□□□ -1.62
SDS22	YKL193C	VPS73	P53142	486 aa	Known RBP	4.91	□□□□□ -1.62
SDS22	YKL193C	SRP1	Q02821	542 aa	Known RBP	4.91	□□□□□ -1.62
SDS22	YKL193C	YNL162W-A	Q3E7A8	72 aa		4.91	□□□□□ -1.62
SDS22	YKL193C	MET3	P08536	511 aa		4.9	□□□□□ -1.63
SDS22	YKL193C	STE5	P32917	917 aa		4.9	□□□□□ -1.63
SDS22	YKL193C	MRP8	P35719	219 aa		4.9	□□□□□ -1.63
SDS22	YKL193C	SDP1	P40479	209 aa		4.9	□□□□□ -1.63
SDS22	YKL193C	YKE2	P52553	114 aa		4.9	□□□□□ -1.63
SDS22	YKL193C	DLT1	Q04216	342 aa		4.9	□□□□□ -1.63
SDS22	YKL193C	WRS1	Q12109	432 aa	Known RBP	4.9	□□□□□ -1.63
SDS22	YKL193C	RPD3	P32561	433 aa		4.89	□□□□□ -1.63
SDS22	YKL193C	TMT1	P32643	299 aa		4.89	□□□□□ -1.63
SDS22	YKL193C	STE13	P33894	931 aa		4.89	□□□□□ -1.63
SDS22	YKL193C	MRPS35	P53292	345 aa		4.89	□□□□□ -1.63
SDS22	YKL193C	TRM11	Q12463	433 aa		4.89	□□□□□ -1.63
SDS22	YKL193C	NPP1	P25353	742 aa		4.88	□□□□□ -1.63
SDS22	YKL193C	DUS3	Q06053	668 aa	Known RBP	4.88	□□□□□ -1.63
SDS22	YKL193C	GRX1	P25373	110 aa	Known RBP	4.87	□□□□□ -1.63
SDS22	YKL193C	YKR078W	P36158	585 aa	Known RBP	4.87	□□□□□ -1.63
SDS22	YKL193C	PBY1	P38254	753 aa		4.87	□□□□□ -1.63
SDS22	YKL193C	YBR184W	P38299	523 aa		4.87	□□□□□ -1.63
SDS22	YKL193C	YBR238C	P38330	731 aa	Known RBP	4.87	□□□□□ -1.63
SDS22	YKL193C	IRR1	P40541	1150 aa		4.87	□□□□□ -1.63
SDS22	YKL193C	MUP1	P50276	574 aa		4.87	□□□□□ -1.63
SDS22	YKL193C	THI7	Q05998	598 aa		4.87	□□□□□ -1.63
SDS22	YKL193C	CAF20	P12962	161 aa	Known RBP	4.86	□□□□□ -1.63
SDS22	YKL193C	FKH2	P41813	862 aa		4.86	□□□□□ -1.63
SDS22	YKL193C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
SDS22	YKL193C	PFD1	P46988	109 aa		4.86	□□□□□ -1.63
SDS22	YKL193C	ARO10	Q06408	635 aa		4.86	□□□□□ -1.63
SDS22	YKL193C	MET6	P05694	767 aa	Known RBP	4.85	□□□□□ -1.63
SDS22	YKL193C	PRP4	P20053	465 aa	Known RBP	4.85	□□□□□ -1.63
SDS22	YKL193C	CDC48	P25694	835 aa	Known RBP	4.85	□□□□□ -1.63
SDS22	YKL193C	AFR1	P33304	620 aa		4.85	□□□□□ -1.63
SDS22	YKL193C	YBR053C	P38235	358 aa		4.85	□□□□□ -1.63
SDS22	YKL193C	PCL5	P38794	229 aa		4.85	□□□□□ -1.63
SDS22	YKL193C	CTF8	P38877	133 aa		4.85	□□□□□ -1.63
SDS22	YKL193C	NAN1	Q02931	896 aa	Known RBP	4.85	□□□□□ -1.63
SDS22	YKL193C	YDR306C	Q06640	478 aa		4.85	□□□□□ -1.63
SDS22	YKL193C	HCA4	P20448	770 aa	Known RBP	4.84	□□□□□ -1.63
SDS22	YKL193C	FMP25	Q08023	583 aa		4.84	□□□□□ -1.63
SDS22	YKL193C	PRP9	P19736	530 aa	Known RBP	4.83	□□□□□ -1.64
SDS22	YKL193C	YIL108W	P40483	696 aa	Known RBP	4.83	□□□□□ -1.64
SDS22	YKL193C	YJL163C	P46996	555 aa		4.83	□□□□□ -1.64
SDS22	YKL193C	SWM1	Q12379	170 aa		4.83	□□□□□ -1.64
SDS22	YKL193C	RAD4	P14736	754 aa		4.82	□□□□□ -1.64
SDS22	YKL193C	ADY2	P25613	283 aa		4.82	□□□□□ -1.64
SDS22	YKL193C	PPH3	P32345	308 aa		4.82	□□□□□ -1.64
SDS22	YKL193C	HBS1	P32769	611 aa	Known RBP	4.82	□□□□□ -1.64
SDS22	YKL193C	RPP1	P38786	293 aa		4.82	□□□□□ -1.64
SDS22	YKL193C	ILV6	P25605	309 aa	Known RBP	4.81	□□□□□ -1.64
SDS22	YKL193C	AAR2	P32357	355 aa	Predicted RBP	4.81	□□□□□ -1.64
SDS22	YKL193C	CDC43	P18898	376 aa		4.8	□□□□□ -1.64
SDS22	YKL193C	KIN3	P22209	435 aa		4.8	□□□□□ -1.64
SDS22	YKL193C	RPL8B	P29453	256 aa	Known RBP	4.8	□□□□□ -1.64
SDS22	YKL193C	ALR2	P43553	858 aa		4.8	□□□□□ -1.64
SDS22	YKL193C	YJL049W	P47048	450 aa		4.8	□□□□□ -1.64
SDS22	YKL193C	UBX5	Q06682	500 aa		4.8	□□□□□ -1.64
SDS22	YKL193C	ERT1	P38140	529 aa		4.79	□□□□□ -1.64
SDS22	YKL193C	SIT1	P39980	628 aa		4.79	□□□□□ -1.64
SDS22	YKL193C	YIL166C	P40445	542 aa		4.79	□□□□□ -1.64
SDS22	YKL193C	TIM54	P47045	478 aa		4.79	□□□□□ -1.64
SDS22	YKL193C	GLO1	P50107	326 aa		4.79	□□□□□ -1.64
SDS22	YKL193C	UTP8	P53276	713 aa	Known RBP	4.79	□□□□□ -1.64
SDS22	YKL193C	TPO2	P53283	614 aa		4.79	□□□□□ -1.64
SDS22	YKL193C	CRR1	Q05790	422 aa		4.79	□□□□□ -1.64
SDS22	YKL193C	SPO75	Q07798	868 aa		4.79	□□□□□ -1.64
SDS22	YKL193C	YRO2	P38079	344 aa		4.78	□□□□□ -1.64
SDS22	YKL193C	ERP6	P53198	216 aa		4.78	□□□□□ -1.64
SDS22	YKL193C	BUL2	Q03758	920 aa	Known RBP	4.78	□□□□□ -1.64
SDS22	YKL193C	EAF1	Q06337	982 aa		4.78	□□□□□ -1.64
SDS22	YKL193C	ADE8	P04161	214 aa		4.77	□□□□□ -1.65
SDS22	YKL193C	ARE1	P25628	610 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms