RNA–Protein interactions for RNA: YKL122C

SRP21, Transcript of Subunit of the signal recognition particle (SRP), yeast

Gene SRP21, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP21	YKL122C	GRX1	P25373	110 aa	Known RBP	4.57	□□□□□ -1.68
SRP21	YKL122C	CDC12	P32468	407 aa	Known RBP	4.57	□□□□□ -1.68
SRP21	YKL122C	PBY1	P38254	753 aa		4.57	□□□□□ -1.68
SRP21	YKL122C	YBR184W	P38299	523 aa		4.57	□□□□□ -1.68
SRP21	YKL122C	IRR1	P40541	1150 aa		4.57	□□□□□ -1.68
SRP21	YKL122C	NAN1	Q02931	896 aa	Known RBP	4.57	□□□□□ -1.68
SRP21	YKL122C	DUS3	Q06053	668 aa	Known RBP	4.57	□□□□□ -1.68
SRP21	YKL122C	YAP7	Q08182	245 aa		4.57	□□□□□ -1.68
SRP21	YKL122C	YNL162W-A	Q3E7A8	72 aa		4.57	□□□□□ -1.68
SRP21	YKL122C	BNR1	P40450	1375 aa		4.56	□□□□□ -1.68
SRP21	YKL122C	GFA1	P14742	717 aa	Known RBP	4.56	□□□□□ -1.68
SRP21	YKL122C	MDM10	P18409	493 aa		4.56	□□□□□ -1.68
SRP21	YKL122C	SAH1	P39954	449 aa	Known RBP	4.56	□□□□□ -1.68
SRP21	YKL122C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SRP21	YKL122C	PFD1	P46988	109 aa		4.56	□□□□□ -1.68
SRP21	YKL122C	YDR306C	Q06640	478 aa		4.56	□□□□□ -1.68
SRP21	YKL122C	PPZ2	P33329	710 aa		4.55	□□□□□ -1.68
SRP21	YKL122C	NPP2	P39997	493 aa		4.55	□□□□□ -1.68
SRP21	YKL122C	FRE5	Q08908	694 aa		4.55	□□□□□ -1.68
SRP21	YKL122C	SUT2	Q12286	268 aa		4.55	□□□□□ -1.68
SRP21	YKL122C	RAD4	P14736	754 aa		4.54	□□□□□ -1.68
SRP21	YKL122C	PRP9	P19736	530 aa	Known RBP	4.54	□□□□□ -1.68
SRP21	YKL122C	ILV6	P25605	309 aa	Known RBP	4.54	□□□□□ -1.68
SRP21	YKL122C	PPH3	P32345	308 aa		4.54	□□□□□ -1.68
SRP21	YKL122C	SRP1	Q02821	542 aa	Known RBP	4.54	□□□□□ -1.68
SRP21	YKL122C	FMP25	Q08023	583 aa		4.54	□□□□□ -1.68
SRP21	YKL122C	TUB1	P09733	447 aa	Known RBP	4.53	□□□□□ -1.68
SRP21	YKL122C	PPS1	P38148	807 aa		4.53	□□□□□ -1.68
SRP21	YKL122C	TDP1	P38319	544 aa		4.53	□□□□□ -1.68
SRP21	YKL122C	RIX1	P38883	763 aa	Predicted RBP	4.53	□□□□□ -1.68
SRP21	YKL122C	YJL049W	P47048	450 aa		4.53	□□□□□ -1.68
SRP21	YKL122C	RAI1	P53063	387 aa	Known RBP	4.53	□□□□□ -1.68
SRP21	YKL122C	SFB2	P53953	876 aa		4.53	□□□□□ -1.68
SRP21	YKL122C	MET3	P08536	511 aa		4.52	□□□□□ -1.69
SRP21	YKL122C	AAR2	P32357	355 aa	Predicted RBP	4.52	□□□□□ -1.69
SRP21	YKL122C	TMT1	P32643	299 aa		4.52	□□□□□ -1.69
SRP21	YKL122C	ALR2	P43553	858 aa		4.52	□□□□□ -1.69
SRP21	YKL122C	TIM54	P47045	478 aa		4.52	□□□□□ -1.69
SRP21	YKL122C	TPO2	P53283	614 aa		4.52	□□□□□ -1.69
SRP21	YKL122C	PEX19	Q07418	342 aa		4.52	□□□□□ -1.69
SRP21	YKL122C	HCA4	P20448	770 aa	Known RBP	4.51	□□□□□ -1.69
SRP21	YKL122C	RPL8B	P29453	256 aa	Known RBP	4.51	□□□□□ -1.69
SRP21	YKL122C	HBS1	P32769	611 aa	Known RBP	4.51	□□□□□ -1.69
SRP21	YKL122C	NNF1	P47149	201 aa		4.51	□□□□□ -1.69
SRP21	YKL122C	ERP6	P53198	216 aa		4.51	□□□□□ -1.69
SRP21	YKL122C	DLT1	Q04216	342 aa		4.51	□□□□□ -1.69
SRP21	YKL122C	UBX5	Q06682	500 aa		4.51	□□□□□ -1.69
SRP21	YKL122C	SPO75	Q07798	868 aa		4.51	□□□□□ -1.69
SRP21	YKL122C	NPP1	P25353	742 aa		4.5	□□□□□ -1.69
SRP21	YKL122C	AFR1	P33304	620 aa		4.5	□□□□□ -1.69
SRP21	YKL122C	CTF13	P35203	478 aa		4.5	□□□□□ -1.69
SRP21	YKL122C	SIT1	P39980	628 aa		4.5	□□□□□ -1.69
SRP21	YKL122C	ELO3	P40319	345 aa		4.5	□□□□□ -1.69
SRP21	YKL122C	ADY4	Q05955	493 aa		4.5	□□□□□ -1.69
SRP21	YKL122C	EAF1	Q06337	982 aa		4.5	□□□□□ -1.69
SRP21	YKL122C	OSH2	Q12451	1283 aa		4.5	□□□□□ -1.69
SRP21	YKL122C	SEC21	P32074	935 aa	Known RBP	4.49	□□□□□ -1.69
SRP21	YKL122C	YRO2	P38079	344 aa		4.49	□□□□□ -1.69
SRP21	YKL122C	ERT1	P38140	529 aa		4.49	□□□□□ -1.69
SRP21	YKL122C	TSL1	P38427	1098 aa	Known RBP	4.49	□□□□□ -1.69
SRP21	YKL122C	TAH11	P47112	604 aa		4.49	□□□□□ -1.69
SRP21	YKL122C	GYP7	P48365	746 aa		4.49	□□□□□ -1.69
SRP21	YKL122C	VPS73	P53142	486 aa	Known RBP	4.49	□□□□□ -1.69
SRP21	YKL122C	UTP8	P53276	713 aa	Known RBP	4.49	□□□□□ -1.69
SRP21	YKL122C	ADE8	P04161	214 aa		4.48	□□□□□ -1.69
SRP21	YKL122C	HSP60	P19882	572 aa	Known RBP	4.48	□□□□□ -1.69
SRP21	YKL122C	ARE1	P25628	610 aa		4.48	□□□□□ -1.69
SRP21	YKL122C	YKR078W	P36158	585 aa	Known RBP	4.48	□□□□□ -1.69
SRP21	YKL122C	FLO10	P36170	1169 aa		4.48	□□□□□ -1.69
SRP21	YKL122C	YHR020W	P38708	688 aa	Known RBP	4.48	□□□□□ -1.69
SRP21	YKL122C	HUL5	P53119	910 aa		4.48	□□□□□ -1.69
SRP21	YKL122C	YGR125W	P53273	1036 aa		4.48	□□□□□ -1.69
SRP21	YKL122C	SEC5	P89102	971 aa		4.48	□□□□□ -1.69
SRP21	YKL122C	YPR196W	Q06595	470 aa		4.48	□□□□□ -1.69
SRP21	YKL122C	TRM11	Q12463	433 aa		4.48	□□□□□ -1.69
SRP21	YKL122C	CDC43	P18898	376 aa		4.47	□□□□□ -1.69
SRP21	YKL122C	CDC48	P25694	835 aa	Known RBP	4.47	□□□□□ -1.69
SRP21	YKL122C	YBR284W	P38150	797 aa		4.47	□□□□□ -1.69
SRP21	YKL122C	BUL2	Q03758	920 aa	Known RBP	4.47	□□□□□ -1.69
SRP21	YKL122C	NSE3	Q05541	303 aa		4.47	□□□□□ -1.69
SRP21	YKL122C	CIT1	P00890	479 aa		4.46	□□□□□ -1.7
SRP21	YKL122C	CAF20	P12962	161 aa	Known RBP	4.46	□□□□□ -1.7
SRP21	YKL122C	CDC11	P32458	415 aa		4.46	□□□□□ -1.7
SRP21	YKL122C	OCA5	P38738	679 aa		4.46	□□□□□ -1.7
SRP21	YKL122C	TOK1	P40310	691 aa		4.46	□□□□□ -1.7
SRP21	YKL122C	GLO1	P50107	326 aa		4.46	□□□□□ -1.7
SRP21	YKL122C	LCD1	Q04377	747 aa		4.46	□□□□□ -1.7
SRP21	YKL122C	FLC1	Q08967	793 aa		4.46	□□□□□ -1.7
SRP21	YKL122C	CDC53	Q12018	815 aa	Known RBP	4.46	□□□□□ -1.7
SRP21	YKL122C	YOL098C	Q12496	1037 aa		4.46	□□□□□ -1.7
SRP21	YKL122C	HBN1	Q96VH4	193 aa		4.46	□□□□□ -1.7
SRP21	YKL122C	FBP1	P09201	348 aa		4.45	□□□□□ -1.7
SRP21	YKL122C	MSD1	P15179	658 aa	Known RBP	4.45	□□□□□ -1.7
SRP21	YKL122C	YBR238C	P38330	731 aa	Known RBP	4.45	□□□□□ -1.7
SRP21	YKL122C	YKE2	P52553	114 aa		4.45	□□□□□ -1.7
SRP21	YKL122C	TAF8	Q03750	510 aa		4.45	□□□□□ -1.7
SRP21	YKL122C	ARO10	Q06408	635 aa		4.45	□□□□□ -1.7
SRP21	YKL122C	YPR071W	Q12346	211 aa		4.45	□□□□□ -1.7
SRP21	YKL122C	NOT3	P06102	836 aa	Known RBP	4.44	□□□□□ -1.7
SRP21	YKL122C	TOP3	P13099	656 aa		4.44	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms