RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	PHM6	Q05637	104 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
VMA22	YHR060W	YOR059C	Q08448	450 aa	Known RBP	5.12	□□□□□ -1.59
VMA22	YHR060W	RRI2	Q12348	645 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	RTP1	Q12751	981 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	INH1	P01097	85 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	YER152C	P10356	443 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	ENA1	P13587	1091 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	MSB1	P21339	1137 aa	Known RBP	5.11	□□□□□ -1.59
VMA22	YHR060W	NFS1	P25374	497 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	NAM7	P30771	971 aa	Known RBP	5.11	□□□□□ -1.59
VMA22	YHR060W	HOG1	P32485	435 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	SMY2	P32909	740 aa	Known RBP	5.11	□□□□□ -1.59
VMA22	YHR060W	EMC3	P36039	253 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	DOT6	P40059	670 aa	Known RBP	5.11	□□□□□ -1.59
VMA22	YHR060W	MMM1	P41800	426 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	SLD3	P53135	668 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	YGR283C	P53336	341 aa	Predicted RBP	5.11	□□□□□ -1.59
VMA22	YHR060W	ELA1	P53861	379 aa	Predicted RBP	5.11	□□□□□ -1.59
VMA22	YHR060W	ENA2	Q01896	1091 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	REH1	Q06709	432 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	NSI1	Q12457	570 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	ENA5	Q12691	1091 aa		5.11	□□□□□ -1.59
VMA22	YHR060W	PCM1	P38628	557 aa	Known RBP	5.1	□□□□□ -1.59
VMA22	YHR060W	RPN10	P38886	268 aa	Known RBP	5.1	□□□□□ -1.59
VMA22	YHR060W	RSC8	P43609	557 aa	Known RBP	5.1	□□□□□ -1.59
VMA22	YHR060W	SPO74	P45819	413 aa		5.1	□□□□□ -1.59
VMA22	YHR060W	YGR153W	P48238	217 aa		5.1	□□□□□ -1.59
VMA22	YHR060W	RSC3	Q06639	885 aa		5.1	□□□□□ -1.59
VMA22	YHR060W	GUP2	Q08929	609 aa		5.1	□□□□□ -1.59
VMA22	YHR060W	YLR122C	Q12312	125 aa		5.1	□□□□□ -1.59
VMA22	YHR060W	ERP4	Q12450	207 aa		5.1	□□□□□ -1.59
VMA22	YHR060W	RPS4A	P0CX35	261 aa	Known RBP	5.09	□□□□□ -1.59
VMA22	YHR060W	RPS4B	P0CX36	261 aa	Known RBP	5.09	□□□□□ -1.59
VMA22	YHR060W	CDC12	P32468	407 aa	Known RBP	5.09	□□□□□ -1.59
VMA22	YHR060W	YKR078W	P36158	585 aa	Known RBP	5.09	□□□□□ -1.59
VMA22	YHR060W	YBR238C	P38330	731 aa	Known RBP	5.09	□□□□□ -1.59
VMA22	YHR060W	BIT2	P38346	545 aa		5.09	□□□□□ -1.59
VMA22	YHR060W	GPP2	P40106	250 aa	Known RBP	5.09	□□□□□ -1.59
VMA22	YHR060W	TOK1	P40310	691 aa		5.09	□□□□□ -1.59
VMA22	YHR060W	CIT3	P43635	486 aa		5.09	□□□□□ -1.59
VMA22	YHR060W	IML2	P47031	731 aa		5.09	□□□□□ -1.59
VMA22	YHR060W	SRB7	P47822	140 aa		5.09	□□□□□ -1.59
VMA22	YHR060W	TSR2	Q06672	205 aa	Known RBP	5.09	□□□□□ -1.59
VMA22	YHR060W	OPY2	Q06810	360 aa		5.09	□□□□□ -1.59
VMA22	YHR060W	RPL11A	P0C0W9	174 aa	Known RBP	5.08	□□□□□ -1.6
VMA22	YHR060W	PFK1	P16861	987 aa	Known RBP	5.08	□□□□□ -1.6
VMA22	YHR060W	TDA3	P38758	523 aa		5.08	□□□□□ -1.6
VMA22	YHR060W	YAP1801	P38856	637 aa		5.08	□□□□□ -1.6
VMA22	YHR060W	RRP8	P38961	392 aa	Known RBP	5.08	□□□□□ -1.6
VMA22	YHR060W	HIS6	P40545	261 aa		5.08	□□□□□ -1.6
VMA22	YHR060W	RET2	P43621	546 aa		5.08	□□□□□ -1.6
VMA22	YHR060W	ALT1	P52893	592 aa		5.08	□□□□□ -1.6
VMA22	YHR060W	YML131W	Q03102	365 aa		5.08	□□□□□ -1.6
VMA22	YHR060W	BUL2	Q03758	920 aa	Known RBP	5.08	□□□□□ -1.6
VMA22	YHR060W	ATG33	Q06485	197 aa		5.08	□□□□□ -1.6
VMA22	YHR060W	PEX15	Q08215	383 aa		5.08	□□□□□ -1.6
VMA22	YHR060W	MET7	Q08645	548 aa		5.08	□□□□□ -1.6
VMA22	YHR060W	HRK1	Q08732	759 aa	Known RBP	5.08	□□□□□ -1.6
VMA22	YHR060W	SPO21	Q12411	609 aa		5.08	□□□□□ -1.6
VMA22	YHR060W	RPL11B	Q3E757	174 aa	Predicted RBP	5.08	□□□□□ -1.6
VMA22	YHR060W	HEM12	P32347	362 aa	Predicted RBP	5.07	□□□□□ -1.6
VMA22	YHR060W	BLI1	P35727	113 aa		5.07	□□□□□ -1.6
VMA22	YHR060W	YHL041W	P38730	149 aa		5.07	□□□□□ -1.6
VMA22	YHR060W	QNS1	P38795	714 aa	Known RBP	5.07	□□□□□ -1.6
VMA22	YHR060W	CCT5	P40413	562 aa	Known RBP	5.07	□□□□□ -1.6
VMA22	YHR060W	GYP8	P43570	497 aa		5.07	□□□□□ -1.6
VMA22	YHR060W	PTA1	Q01329	785 aa	Predicted RBP	5.07	□□□□□ -1.6
VMA22	YHR060W	SKY1	Q03656	742 aa		5.07	□□□□□ -1.6
VMA22	YHR060W	SPC19	Q03954	165 aa		5.07	□□□□□ -1.6
VMA22	YHR060W	NHX1	Q04121	633 aa		5.07	□□□□□ -1.6
VMA22	YHR060W	YMR018W	Q04364	514 aa		5.07	□□□□□ -1.6
VMA22	YHR060W	MED7	Q08278	222 aa		5.07	□□□□□ -1.6
VMA22	YHR060W	NEW1	Q08972	1196 aa	Known RBP	5.07	□□□□□ -1.6
VMA22	YHR060W	ACM1	Q08981	209 aa		5.07	□□□□□ -1.6
VMA22	YHR060W	MPH2	P0CD99	609 aa		5.06	□□□□□ -1.6
VMA22	YHR060W	COX11	P19516	300 aa	Known RBP	5.06	□□□□□ -1.6
VMA22	YHR060W	DBF20	P32328	564 aa		5.06	□□□□□ -1.6
VMA22	YHR060W	MCD4	P36051	919 aa		5.06	□□□□□ -1.6
VMA22	YHR060W	EXO84	P38261	753 aa		5.06	□□□□□ -1.6
VMA22	YHR060W	HSL7	P38274	827 aa		5.06	□□□□□ -1.6
VMA22	YHR060W	ACA1	P39970	489 aa		5.06	□□□□□ -1.6
VMA22	YHR060W	RPN3	P40016	523 aa	Known RBP	5.06	□□□□□ -1.6
VMA22	YHR060W	TMA108	P40462	946 aa		5.06	□□□□□ -1.6
VMA22	YHR060W	RSA3	Q05942	220 aa	Known RBP	5.06	□□□□□ -1.6
VMA22	YHR060W	YLR257W	Q06146	321 aa	Known RBP	5.06	□□□□□ -1.6
VMA22	YHR060W	YLL058W	Q12198	575 aa		5.06	□□□□□ -1.6
VMA22	YHR060W	PRO1	P32264	428 aa		5.05	□□□□□ -1.6
VMA22	YHR060W	BFA1	P47113	574 aa		5.05	□□□□□ -1.6
VMA22	YHR060W	YGR130C	P53278	816 aa		5.05	□□□□□ -1.6
VMA22	YHR060W	RCM1	P53972	490 aa		5.05	□□□□□ -1.6
VMA22	YHR060W	ENV7	Q12003	364 aa		5.05	□□□□□ -1.6
VMA22	YHR060W	YPR027C	Q12079	277 aa		5.05	□□□□□ -1.6
VMA22	YHR060W	HMG1	P12683	1054 aa		5.04	□□□□□ -1.6
VMA22	YHR060W	KIP1	P28742	1111 aa		5.04	□□□□□ -1.6
VMA22	YHR060W	CHS3	P29465	1165 aa		5.04	□□□□□ -1.6
VMA22	YHR060W	WHI3	P34761	661 aa	Known RBP	5.04	□□□□□ -1.6
VMA22	YHR060W	GYP7	P48365	746 aa		5.04	□□□□□ -1.6
VMA22	YHR060W	AIM14	P53109	570 aa		5.04	□□□□□ -1.6
VMA22	YHR060W	CNM67	P53865	581 aa	Known RBP	5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 86.4 ms