RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W PEX19Q07418 342 aa4.84□□□□□ -1.63
PTI1YGR156W IRC10Q08118 586 aa4.84□□□□□ -1.63
PTI1YGR156W PPR1P07272 904 aaPredicted RBP4.83□□□□□ -1.64
PTI1YGR156W STE14P32584 239 aa4.83□□□□□ -1.64
PTI1YGR156W ATF1P40353 525 aa4.83□□□□□ -1.64
PTI1YGR156W BUD6P41697 788 aa4.83□□□□□ -1.64
PTI1YGR156W RPN4Q03465 531 aa4.83□□□□□ -1.64
PTI1YGR156W CIT2P08679 460 aa4.82□□□□□ -1.64
PTI1YGR156W STI1P15705 589 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
PTI1YGR156W AAR2P32357 355 aaPredicted RBP4.82□□□□□ -1.64
PTI1YGR156W TSL1P38427 1098 aaKnown RBP4.82□□□□□ -1.64
PTI1YGR156W GUS1P46655 708 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
PTI1YGR156W TPO2P53283 614 aa4.82□□□□□ -1.64
PTI1YGR156W RNH70P53331 553 aa4.82□□□□□ -1.64
PTI1YGR156W STE13P33894 931 aa4.81□□□□□ -1.64
PTI1YGR156W VBA5P36172 582 aa4.81□□□□□ -1.64
PTI1YGR156W SHE9Q04172 456 aa4.81□□□□□ -1.64
PTI1YGR156W BDF2Q07442 638 aa4.81□□□□□ -1.64
PTI1YGR156W SWM1Q12379 170 aa4.81□□□□□ -1.64
PTI1YGR156W RFA1P22336 621 aaKnown RBP4.8□□□□□ -1.64
PTI1YGR156W SSL1Q04673 461 aaPredicted RBP4.8□□□□□ -1.64
PTI1YGR156W HBT1Q07653 1046 aaKnown RBP4.8□□□□□ -1.64
PTI1YGR156W WRS1Q12109 432 aaKnown RBP4.8□□□□□ -1.64
PTI1YGR156W MET3P08536 511 aa4.79□□□□□ -1.64
PTI1YGR156W SRP40P32583 406 aaPredicted RBP4.79□□□□□ -1.64
PTI1YGR156W SCT1P32784 759 aa4.79□□□□□ -1.64
PTI1YGR156W CUE2P36075 443 aaKnown RBP4.79□□□□□ -1.64
PTI1YGR156W RRP14P36080 434 aaKnown RBP4.79□□□□□ -1.64
PTI1YGR156W YRO2P38079 344 aa4.79□□□□□ -1.64
PTI1YGR156W SNM1P40993 198 aa4.79□□□□□ -1.64
PTI1YGR156W YKE2P52553 114 aa4.79□□□□□ -1.64
PTI1YGR156W MUK1Q02866 612 aa4.79□□□□□ -1.64
PTI1YGR156W GRX1P25373 110 aaKnown RBP4.78□□□□□ -1.64
PTI1YGR156W MTH1P35198 433 aa4.78□□□□□ -1.64
PTI1YGR156W YBR238CP38330 731 aaKnown RBP4.78□□□□□ -1.64
PTI1YGR156W SPF1P39986 1215 aaKnown RBP4.78□□□□□ -1.64
PTI1YGR156W SDP1P40479 209 aa4.78□□□□□ -1.64
PTI1YGR156W YIL108WP40483 696 aaKnown RBP4.78□□□□□ -1.64
PTI1YGR156W DAS1P47005 663 aa4.78□□□□□ -1.64
PTI1YGR156W GND2P53319 492 aa4.78□□□□□ -1.64
PTI1YGR156W DLT1Q04216 342 aa4.78□□□□□ -1.64
PTI1YGR156W OPI10Q08202 246 aa4.78□□□□□ -1.64
PTI1YGR156W TRM11Q12463 433 aa4.78□□□□□ -1.64
PTI1YGR156W SEC21P32074 935 aaKnown RBP4.77□□□□□ -1.65
PTI1YGR156W YKL091CP33324 310 aaKnown RBP4.77□□□□□ -1.65
PTI1YGR156W CTF13P35203 478 aa4.77□□□□□ -1.65
PTI1YGR156W ERG5P54781 538 aa4.77□□□□□ -1.65
PTI1YGR156W SLU7Q02775 382 aaKnown RBP4.77□□□□□ -1.65
PTI1YGR156W FRE5Q08908 694 aa4.77□□□□□ -1.65
PTI1YGR156W FBP1P09201 348 aa4.76□□□□□ -1.65
PTI1YGR156W NPP1P25353 742 aa4.76□□□□□ -1.65
PTI1YGR156W TYE7P33122 291 aaPredicted RBP4.76□□□□□ -1.65
PTI1YGR156W MRP8P35719 219 aa4.76□□□□□ -1.65
PTI1YGR156W CEP3P40969 608 aa4.76□□□□□ -1.65
PTI1YGR156W OSW7P43611 510 aa4.76□□□□□ -1.65
PTI1YGR156W CCM1P48237 864 aaPredicted RBP4.76□□□□□ -1.65
PTI1YGR156W ALG12P53730 551 aa4.76□□□□□ -1.65
PTI1YGR156W CAF20P12962 161 aaKnown RBP4.75□□□□□ -1.65
PTI1YGR156W RPD3P32561 433 aa4.75□□□□□ -1.65
PTI1YGR156W PBP2P38151 413 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
PTI1YGR156W PBY1P38254 753 aa4.75□□□□□ -1.65
PTI1YGR156W YHL017WP38745 532 aa4.75□□□□□ -1.65
PTI1YGR156W ELO3P40319 345 aa4.75□□□□□ -1.65
PTI1YGR156W TRM13Q12383 476 aa4.75□□□□□ -1.65
PTI1YGR156W YKL069WP36088 180 aa4.74□□□□□ -1.65
PTI1YGR156W YHR020WP38708 688 aaKnown RBP4.74□□□□□ -1.65
PTI1YGR156W SIT1P39980 628 aa4.74□□□□□ -1.65
PTI1YGR156W HUL5P53119 910 aa4.74□□□□□ -1.65
PTI1YGR156W CDC53Q12018 815 aaKnown RBP4.74□□□□□ -1.65
PTI1YGR156W PRI2P20457 528 aa4.73□□□□□ -1.65
PTI1YGR156W PPS1P38148 807 aa4.73□□□□□ -1.65
PTI1YGR156W CTF8P38877 133 aa4.73□□□□□ -1.65
PTI1YGR156W FPR3P38911 411 aaKnown RBP4.73□□□□□ -1.65
PTI1YGR156W YKR011CQ02209 353 aa4.73□□□□□ -1.65
PTI1YGR156W NAN1Q02931 896 aaKnown RBP4.73□□□□□ -1.65
PTI1YGR156W TDA5Q06417 326 aaKnown RBP4.73□□□□□ -1.65
PTI1YGR156W RAD4P14736 754 aa4.72□□□□□ -1.65
PTI1YGR156W RPP1P38786 293 aa4.72□□□□□ -1.65
PTI1YGR156W SDS3P40505 327 aa4.72□□□□□ -1.65
PTI1YGR156W IRR1P40541 1150 aa4.72□□□□□ -1.65
PTI1YGR156W SPA2P23201 1466 aaKnown RBP4.71□□□□□ -1.66
PTI1YGR156W RPS9AO13516 197 aaKnown RBP4.71□□□□□ -1.66
PTI1YGR156W PPG1P32838 368 aa4.71□□□□□ -1.66
PTI1YGR156W PUS2P53167 370 aa4.71□□□□□ -1.66
PTI1YGR156W LCD1Q04377 747 aa4.71□□□□□ -1.66
PTI1YGR156W ADY4Q05955 493 aa4.71□□□□□ -1.66
PTI1YGR156W NDJ1Q12366 352 aa4.71□□□□□ -1.66
PTI1YGR156W YOR131CQ12486 218 aa4.71□□□□□ -1.66
PTI1YGR156W TUB3P09734 445 aaKnown RBP4.7□□□□□ -1.66
PTI1YGR156W CDC43P18898 376 aa4.7□□□□□ -1.66
PTI1YGR156W PRP9P19736 530 aaKnown RBP4.7□□□□□ -1.66
PTI1YGR156W CDC11P32458 415 aa4.7□□□□□ -1.66
PTI1YGR156W NGG1P32494 702 aa4.7□□□□□ -1.66
PTI1YGR156W STE5P32917 917 aa4.7□□□□□ -1.66
PTI1YGR156W AFR1P33304 620 aa4.7□□□□□ -1.66
PTI1YGR156W REC104P33323 182 aa4.7□□□□□ -1.66
PTI1YGR156W YHR078WP38799 552 aa4.7□□□□□ -1.66
PTI1YGR156W FKH2P41813 862 aa4.7□□□□□ -1.66
PTI1YGR156W CRR1Q05790 422 aa4.7□□□□□ -1.66
PTI1YGR156W MRH1Q12117 320 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms