RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W YLR122CQ12312 125 aa5.88□□□□□ -1.47
PDE1YGL248W TY1A-NL1Q12391 440 aaKnown RBP5.88□□□□□ -1.47
PDE1YGL248W HSH49Q99181 213 aaPredicted RBP5.88□□□□□ -1.47
PDE1YGL248W TUF1P02992 437 aaKnown RBP5.87□□□□□ -1.47
PDE1YGL248W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
PDE1YGL248W PET111P08468 800 aa5.87□□□□□ -1.47
PDE1YGL248W MSN1P22148 382 aa5.87□□□□□ -1.47
PDE1YGL248W RAD16P31244 790 aa5.87□□□□□ -1.47
PDE1YGL248W DPH2P32461 534 aa5.87□□□□□ -1.47
PDE1YGL248W SCT1P32784 759 aa5.87□□□□□ -1.47
PDE1YGL248W YKR073CP36153 106 aa5.87□□□□□ -1.47
PDE1YGL248W VPS41P38959 992 aa5.87□□□□□ -1.47
PDE1YGL248W DUG1P43616 481 aaKnown RBP5.87□□□□□ -1.47
PDE1YGL248W UTP8P53276 713 aaKnown RBP5.87□□□□□ -1.47
PDE1YGL248W YGR130CP53278 816 aa5.87□□□□□ -1.47
PDE1YGL248W MEP3P53390 489 aa5.87□□□□□ -1.47
PDE1YGL248W NCS2P53923 493 aaPredicted RBP5.87□□□□□ -1.47
PDE1YGL248W SHE9Q04172 456 aa5.87□□□□□ -1.47
PDE1YGL248W DAL4Q04895 635 aa5.87□□□□□ -1.47
PDE1YGL248W YDL124WQ07551 312 aaKnown RBP5.87□□□□□ -1.47
PDE1YGL248W TMA46Q12000 345 aaKnown RBP5.87□□□□□ -1.47
PDE1YGL248W RRG1Q12167 365 aaPredicted RBP5.87□□□□□ -1.47
PDE1YGL248W TRP3P00937 484 aa5.86□□□□□ -1.47
PDE1YGL248W RPC40P07703 335 aaKnown RBP5.86□□□□□ -1.47
PDE1YGL248W TRX1P22217 103 aaKnown RBP5.86□□□□□ -1.47
PDE1YGL248W AGP1P25376 633 aa5.86□□□□□ -1.47
PDE1YGL248W CDC48P25694 835 aaKnown RBP5.86□□□□□ -1.47
PDE1YGL248W CMK1P27466 446 aaKnown RBP5.86□□□□□ -1.47
PDE1YGL248W CNS1P33313 385 aa5.86□□□□□ -1.47
PDE1YGL248W PIM1P36775 1133 aa5.86□□□□□ -1.47
PDE1YGL248W UBS1P38290 277 aa5.86□□□□□ -1.47
PDE1YGL248W TIF5P38431 405 aaKnown RBP5.86□□□□□ -1.47
PDE1YGL248W RBG2P53295 368 aaKnown RBP5.86□□□□□ -1.47
PDE1YGL248W DSE4P53753 1117 aa5.86□□□□□ -1.47
PDE1YGL248W TRS130Q03660 1102 aa5.86□□□□□ -1.47
PDE1YGL248W RIX7Q07844 837 aaKnown RBP5.86□□□□□ -1.47
PDE1YGL248W SMF3Q12078 473 aaPredicted RBP5.86□□□□□ -1.47
PDE1YGL248W CMR1Q12510 522 aaKnown RBP5.86□□□□□ -1.47
PDE1YGL248W PRP5P21372 849 aaPredicted RBP5.85□□□□□ -1.47
PDE1YGL248W AEP2P22136 580 aa5.85□□□□□ -1.47
PDE1YGL248W DAL80P26343 269 aa5.85□□□□□ -1.47
PDE1YGL248W FUN30P31380 1131 aa5.85□□□□□ -1.47
PDE1YGL248W PET309P32522 965 aaPredicted RBP5.85□□□□□ -1.47
PDE1YGL248W BEM3P32873 1128 aa5.85□□□□□ -1.47
PDE1YGL248W RPC37P36121 282 aa5.85□□□□□ -1.47
PDE1YGL248W SAF1P38352 637 aa5.85□□□□□ -1.47
PDE1YGL248W RTT105P40063 208 aa5.85□□□□□ -1.47
PDE1YGL248W IRC24P40580 263 aa5.85□□□□□ -1.47
PDE1YGL248W FYV8P46949 817 aaKnown RBP5.85□□□□□ -1.47
PDE1YGL248W MTQ2Q03920 221 aaPredicted RBP5.85□□□□□ -1.47
PDE1YGL248W YDL073WQ07454 984 aa5.85□□□□□ -1.47
PDE1YGL248W YLR001CQ07895 862 aa5.85□□□□□ -1.47
PDE1YGL248W TAH18Q12181 623 aa5.85□□□□□ -1.47
PDE1YGL248W YRM1Q12340 786 aa5.85□□□□□ -1.47
PDE1YGL248W ENT1Q12518 454 aa5.85□□□□□ -1.47
PDE1YGL248W SSM4P40318 1319 aa5.84□□□□□ -1.47
PDE1YGL248W CHS2P14180 963 aa5.84□□□□□ -1.47
PDE1YGL248W MER1P16523 270 aa5.84□□□□□ -1.47
PDE1YGL248W HNM1P19807 563 aa5.84□□□□□ -1.47
PDE1YGL248W REC107P21651 314 aa5.84□□□□□ -1.47
PDE1YGL248W RPB10P22139 70 aa5.84□□□□□ -1.47
PDE1YGL248W RET1P22276 1149 aaKnown RBP5.84□□□□□ -1.47
PDE1YGL248W DBF4P32325 704 aa5.84□□□□□ -1.47
PDE1YGL248W DHR2P36009 735 aaPredicted RBP5.84□□□□□ -1.47
PDE1YGL248W PBY1P38254 753 aa5.84□□□□□ -1.47
PDE1YGL248W AKR1P39010 764 aa5.84□□□□□ -1.47
PDE1YGL248W MEF2P39677 819 aa5.84□□□□□ -1.47
PDE1YGL248W MGS1P40151 587 aa5.84□□□□□ -1.47
PDE1YGL248W PCL7P40186 285 aa5.84□□□□□ -1.47
PDE1YGL248W SET2P46995 733 aaKnown RBP5.84□□□□□ -1.47
PDE1YGL248W NPY1P53164 384 aa5.84□□□□□ -1.47
PDE1YGL248W HST1P53685 503 aa5.84□□□□□ -1.47
PDE1YGL248W MRPL19P53875 158 aa5.84□□□□□ -1.47
PDE1YGL248W SEC5P89102 971 aa5.84□□□□□ -1.47
PDE1YGL248W SYF1Q04048 859 aaPredicted RBP5.84□□□□□ -1.47
PDE1YGL248W TAP42Q04372 366 aa5.84□□□□□ -1.47
PDE1YGL248W SPP382Q06411 708 aaPredicted RBP5.84□□□□□ -1.47
PDE1YGL248W AOS1Q06624 347 aa5.84□□□□□ -1.47
PDE1YGL248W CLP1Q08685 445 aaPredicted RBP5.84□□□□□ -1.47
PDE1YGL248W RUD3Q12234 484 aaKnown RBP5.84□□□□□ -1.47
PDE1YGL248W PFK1P16861 987 aaKnown RBP5.83□□□□□ -1.48
PDE1YGL248W PET123P17558 318 aa5.83□□□□□ -1.48
PDE1YGL248W GSY1P23337 708 aa5.83□□□□□ -1.48
PDE1YGL248W SBA1P28707 216 aaKnown RBP5.83□□□□□ -1.48
PDE1YGL248W NPL6P32832 435 aa5.83□□□□□ -1.48
PDE1YGL248W LIP5P32875 414 aa5.83□□□□□ -1.48
PDE1YGL248W ARC19P33204 171 aaKnown RBP5.83□□□□□ -1.48
PDE1YGL248W BET3P36149 193 aa5.83□□□□□ -1.48
PDE1YGL248W CCL1P37366 393 aa5.83□□□□□ -1.48
PDE1YGL248W TOS1P38288 455 aa5.83□□□□□ -1.48
PDE1YGL248W YBR287WP38355 427 aa5.83□□□□□ -1.48
PDE1YGL248W SPT8P38915 602 aa5.83□□□□□ -1.48
PDE1YGL248W DSS1P39112 969 aa5.83□□□□□ -1.48
PDE1YGL248W FIR1P40020 876 aa5.83□□□□□ -1.48
PDE1YGL248W INP51P40559 946 aaKnown RBP5.83□□□□□ -1.48
PDE1YGL248W MAL11P53048 616 aa5.83□□□□□ -1.48
PDE1YGL248W PIL1P53252 339 aaKnown RBP5.83□□□□□ -1.48
PDE1YGL248W VPS9P54787 451 aa5.83□□□□□ -1.48
PDE1YGL248W GTR1Q00582 310 aa5.83□□□□□ -1.48
PDE1YGL248W TDA9Q04545 1251 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms