RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C SSD1P24276 1250 aaKnown RBP RIP-Chip data13.93□□□□□ -0.18not detected
PHO4YFR034C NAM7P30771 971 aaKnown RBP13.93□□□□□ -0.18
PHO4YFR034C DBP7P36120 742 aaKnown RBP13.93□□□□□ -0.18
PHO4YFR034C YEL025CP39991 1188 aa13.93□□□□□ -0.18
PHO4YFR034C HXT8P40886 569 aa13.93□□□□□ -0.18
PHO4YFR034C DED1P06634 604 aaKnown RBP13.92□□□□□ -0.18
PHO4YFR034C SSA4P22202 642 aaKnown RBP13.92□□□□□ -0.18
PHO4YFR034C MUD1P32605 298 aaKnown RBP13.92□□□□□ -0.18
PHO4YFR034C TFC4P33339 1025 aa13.92□□□□□ -0.18
PHO4YFR034C KIC1P38692 1080 aa13.92□□□□□ -0.18
PHO4YFR034C JIP4Q03361 876 aa13.92□□□□□ -0.18
PHO4YFR034C YMR321CQ04898 105 aa13.92□□□□□ -0.18
PHO4YFR034C ATG23Q06671 453 aa13.92□□□□□ -0.18
PHO4YFR034C SIL1Q08199 421 aa13.92□□□□□ -0.18
PHO4YFR034C CDC53Q12018 815 aaKnown RBP13.92□□□□□ -0.18
PHO4YFR034C OSH2Q12451 1283 aa13.92□□□□□ -0.18
PHO4YFR034C TRP2P00899 507 aaKnown RBP13.91□□□□□ -0.18
PHO4YFR034C RAD54P32863 898 aa13.91□□□□□ -0.18
PHO4YFR034C BYE1P36106 594 aa13.91□□□□□ -0.18
PHO4YFR034C BSD2P38356 321 aa13.91□□□□□ -0.18
PHO4YFR034C CCT4P39078 528 aaKnown RBP13.91□□□□□ -0.18
PHO4YFR034C RTT102P53330 157 aa13.91□□□□□ -0.18
PHO4YFR034C COQ9Q05779 260 aa13.91□□□□□ -0.18
PHO4YFR034C GPI13Q07830 1017 aa13.91□□□□□ -0.18
PHO4YFR034C VMA1P17255 1071 aaKnown RBP13.9□□□□□ -0.18
PHO4YFR034C PAP1P29468 568 aaKnown RBP13.9□□□□□ -0.18
PHO4YFR034C YGR021WP53212 290 aa13.9□□□□□ -0.18
PHO4YFR034C MDR1P53258 950 aa13.9□□□□□ -0.18
PHO4YFR034C BTN2P53286 410 aa13.9□□□□□ -0.18
PHO4YFR034C UBP3Q01477 912 aaKnown RBP RIP-Chip data13.9□□□□□ -0.18not detected
PHO4YFR034C VTC3Q02725 835 aa13.9□□□□□ -0.18
PHO4YFR034C YML082WQ04533 649 aaKnown RBP13.9□□□□□ -0.18
PHO4YFR034C POB3Q04636 552 aaKnown RBP13.9□□□□□ -0.18
PHO4YFR034C YDL206WQ12424 762 aa13.9□□□□□ -0.18
PHO4YFR034C HVG1P0CE11 249 aa13.89□□□□□ -0.19
PHO4YFR034C RPO26P20435 155 aa13.89□□□□□ -0.19
PHO4YFR034C KIP1P28742 1111 aa13.89□□□□□ -0.19
PHO4YFR034C YMR114CQ04471 368 aaKnown RBP13.89□□□□□ -0.19
PHO4YFR034C IES4Q08561 116 aa13.89□□□□□ -0.19
PHO4YFR034C SLX4Q12098 748 aa13.89□□□□□ -0.19
PHO4YFR034C TY3A-GQ12173 290 aa13.89□□□□□ -0.19
PHO4YFR034C TY3A-IQ99219 290 aa13.89□□□□□ -0.19
PHO4YFR034C ECM29P38737 1868 aa13.89□□□□□ -0.19
PHO4YFR034C ERG11P10614 530 aa13.88□□□□□ -0.19
PHO4YFR034C EAF5P39995 279 aa13.88□□□□□ -0.19
PHO4YFR034C NPP2P39997 493 aa13.88□□□□□ -0.19
PHO4YFR034C SGM1P47166 707 aa13.88□□□□□ -0.19
PHO4YFR034C RPS7BP48164 190 aaKnown RBP13.88□□□□□ -0.19
PHO4YFR034C YLL058WQ12198 575 aa13.88□□□□□ -0.19
PHO4YFR034C TRM11Q12463 433 aa13.88□□□□□ -0.19
PHO4YFR034C GFA1P14742 717 aaKnown RBP13.87□□□□□ -0.19
PHO4YFR034C ASH1P34233 588 aa13.87□□□□□ -0.19
PHO4YFR034C KAP114P53067 1004 aa13.87□□□□□ -0.19
PHO4YFR034C CWC22P53333 577 aaKnown RBP13.87□□□□□ -0.19
PHO4YFR034C SYH1Q02875 849 aaKnown RBP13.87□□□□□ -0.19
PHO4YFR034C UTP14Q04500 899 aaKnown RBP13.87□□□□□ -0.19
PHO4YFR034C MSC6Q08818 692 aaKnown RBP13.87□□□□□ -0.19
PHO4YFR034C OSW2Q12202 724 aa13.87□□□□□ -0.19
PHO4YFR034C YDR461C-AQ2V2P7 80 aa13.87□□□□□ -0.19
PHO4YFR034C YUR1P26725 428 aa13.86□□□□□ -0.19
PHO4YFR034C IRE1P32361 1115 aa13.86□□□□□ -0.19
PHO4YFR034C CNS1P33313 385 aa13.86□□□□□ -0.19
PHO4YFR034C PIN4P34217 668 aaKnown RBP RIP-Chip data13.86□□□□□ -0.19not detected
PHO4YFR034C TRZ1P36159 838 aaPredicted RBP13.86□□□□□ -0.19
PHO4YFR034C SPR3P41901 512 aa13.86□□□□□ -0.19
PHO4YFR034C HSH155P49955 971 aaKnown RBP13.86□□□□□ -0.19
PHO4YFR034C SNF1P06782 633 aaKnown RBP13.85□□□□□ -0.19
PHO4YFR034C EFT1P32324 842 aaKnown RBP13.85□□□□□ -0.19
PHO4YFR034C YKL050CP35736 922 aa13.85□□□□□ -0.19
PHO4YFR034C MAD1P40957 749 aa13.85□□□□□ -0.19
PHO4YFR034C YNL146WP53906 100 aa13.85□□□□□ -0.19
PHO4YFR034C YMR018WQ04364 514 aa13.85□□□□□ -0.19
PHO4YFR034C CST9Q06032 482 aa13.85□□□□□ -0.19
PHO4YFR034C RMP1Q12530 201 aa13.85□□□□□ -0.19
PHO4YFR034C SEC21P32074 935 aaKnown RBP13.84□□□□□ -0.19
PHO4YFR034C CDC11P32458 415 aa13.84□□□□□ -0.19
PHO4YFR034C RGT1P32862 1170 aa13.84□□□□□ -0.19
PHO4YFR034C APE3P37302 537 aaKnown RBP13.84□□□□□ -0.19
PHO4YFR034C PSP2P50109 593 aaKnown RBP13.84□□□□□ -0.19
PHO4YFR034C SHE10P53075 577 aa13.84□□□□□ -0.19
PHO4YFR034C CUL3P53202 744 aa13.84□□□□□ -0.19
PHO4YFR034C DIG1Q03063 452 aaKnown RBP13.84□□□□□ -0.19
PHO4YFR034C CDC33P07260 213 aaKnown RBP13.83□□□□□ -0.2
PHO4YFR034C RCK2P38623 610 aa13.83□□□□□ -0.2
PHO4YFR034C CLA4P48562 842 aa13.83□□□□□ -0.2
PHO4YFR034C ASN1P49089 572 aaKnown RBP13.83□□□□□ -0.2
PHO4YFR034C ORC5P50874 479 aa13.83□□□□□ -0.2
PHO4YFR034C ENV11P53246 860 aa13.83□□□□□ -0.2
PHO4YFR034C BLI1P35727 113 aa13.82□□□□□ -0.2
PHO4YFR034C BCH2P36122 765 aa13.82□□□□□ -0.2
PHO4YFR034C EXO5P38289 585 aa13.82□□□□□ -0.2
PHO4YFR034C TDA3P38758 523 aa13.82□□□□□ -0.2
PHO4YFR034C VPS70P47161 811 aa13.82□□□□□ -0.2
PHO4YFR034C NUR1Q12066 484 aa13.82□□□□□ -0.2
PHO4YFR034C KIN82P25341 720 aa13.81□□□□□ -0.2
PHO4YFR034C RME1P32338 300 aaKnown RBP13.81□□□□□ -0.2
PHO4YFR034C SWI3P32591 825 aa13.81□□□□□ -0.2
PHO4YFR034C CIN4P39110 191 aa13.81□□□□□ -0.2
PHO4YFR034C PSY2P40164 858 aa13.81□□□□□ -0.2
PHO4YFR034C JJJ1P53863 590 aa13.81□□□□□ -0.2
Retrieved 100 of 5,963 RNA–protein pairs in 174.6 ms