RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W ATG19P35193 415 aa4.58□□□□□ -1.68
LOC1YFR001W GDH3P39708 457 aa4.58□□□□□ -1.68
LOC1YFR001W OSW7P43611 510 aa4.58□□□□□ -1.68
LOC1YFR001W ALG2P43636 503 aa4.58□□□□□ -1.68
LOC1YFR001W YGR283CP53336 341 aaPredicted RBP4.58□□□□□ -1.68
LOC1YFR001W HDA1P53973 706 aa4.58□□□□□ -1.68
LOC1YFR001W WHI4Q07655 649 aaKnown RBP4.58□□□□□ -1.68
LOC1YFR001W MPH2P0CD99 609 aa4.57□□□□□ -1.68
LOC1YFR001W LST4P34239 828 aa4.57□□□□□ -1.68
LOC1YFR001W EMC3P36039 253 aa4.57□□□□□ -1.68
LOC1YFR001W URM1P40554 99 aaPredicted RBP4.57□□□□□ -1.68
LOC1YFR001W GYP8P43570 497 aa4.57□□□□□ -1.68
LOC1YFR001W NIT3P49954 291 aa4.57□□□□□ -1.68
LOC1YFR001W VPS30Q02948 557 aa4.57□□□□□ -1.68
LOC1YFR001W SSL1Q04673 461 aaPredicted RBP4.57□□□□□ -1.68
LOC1YFR001W PHR1P05066 565 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
LOC1YFR001W FBP1P09201 348 aa4.56□□□□□ -1.68
LOC1YFR001W PHO8P11491 566 aa4.56□□□□□ -1.68
LOC1YFR001W URA1P28272 314 aaPredicted RBP4.56□□□□□ -1.68
LOC1YFR001W RPD3P32561 433 aa4.56□□□□□ -1.68
LOC1YFR001W PLB1P39105 664 aa4.56□□□□□ -1.68
LOC1YFR001W CEP3P40969 608 aa4.56□□□□□ -1.68
LOC1YFR001W HSV2P50079 448 aaPredicted RBP4.56□□□□□ -1.68
LOC1YFR001W DAM1P53267 343 aa4.56□□□□□ -1.68
LOC1YFR001W CLU1Q03690 1277 aaKnown RBP4.56□□□□□ -1.68
LOC1YFR001W YLR125WQ12138 136 aa4.56□□□□□ -1.68
LOC1YFR001W MAL11P53048 616 aa4.55□□□□□ -1.68
LOC1YFR001W NCS6P53088 359 aa4.55□□□□□ -1.68
LOC1YFR001W NOG2P53742 486 aaKnown RBP4.55□□□□□ -1.68
LOC1YFR001W YKR011CQ02209 353 aa4.55□□□□□ -1.68
LOC1YFR001W TMA10Q06177 86 aa4.55□□□□□ -1.68
LOC1YFR001W UPC2Q12151 913 aa4.55□□□□□ -1.68
LOC1YFR001W RAD53P22216 821 aa4.54□□□□□ -1.68
LOC1YFR001W STE14P32584 239 aa4.54□□□□□ -1.68
LOC1YFR001W TYE7P33122 291 aaPredicted RBP4.54□□□□□ -1.68
LOC1YFR001W SPC29P33419 253 aa4.54□□□□□ -1.68
LOC1YFR001W YIL108WP40483 696 aaKnown RBP4.54□□□□□ -1.68
LOC1YFR001W KCS1Q12494 1050 aa4.54□□□□□ -1.68
LOC1YFR001W RPS9AO13516 197 aaKnown RBP4.53□□□□□ -1.68
LOC1YFR001W DAL7P21826 554 aa4.53□□□□□ -1.68
LOC1YFR001W STE11P23561 717 aa4.53□□□□□ -1.68
LOC1YFR001W CYS3P31373 394 aaKnown RBP4.53□□□□□ -1.68
LOC1YFR001W THI4P32318 326 aa4.53□□□□□ -1.68
LOC1YFR001W MPT5P39016 859 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
LOC1YFR001W TY4A-JP47023 414 aa4.53□□□□□ -1.68
LOC1YFR001W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
LOC1YFR001W MNN10P50108 393 aaKnown RBP4.53□□□□□ -1.68
LOC1YFR001W MCM6P53091 1017 aaKnown RBP4.53□□□□□ -1.68
LOC1YFR001W RNH70P53331 553 aa4.53□□□□□ -1.68
LOC1YFR001W ATP25Q03153 612 aa4.53□□□□□ -1.68
LOC1YFR001W YDR514CQ04408 483 aa4.53□□□□□ -1.68
LOC1YFR001W SED4P25365 1065 aa4.52□□□□□ -1.69
LOC1YFR001W MSH2P25847 964 aa4.52□□□□□ -1.69
LOC1YFR001W CTS1P29029 562 aa4.52□□□□□ -1.69
LOC1YFR001W SDP1P40479 209 aa4.52□□□□□ -1.69
LOC1YFR001W TAD1P53065 400 aa4.52□□□□□ -1.69
LOC1YFR001W REH1Q06709 432 aa4.52□□□□□ -1.69
LOC1YFR001W MET7Q08645 548 aa4.52□□□□□ -1.69
LOC1YFR001W NPC2Q12408 173 aa4.52□□□□□ -1.69
LOC1YFR001W MDM12Q92328 271 aa4.52□□□□□ -1.69
LOC1YFR001W YCL002CP25565 263 aa4.51□□□□□ -1.69
LOC1YFR001W SHM2P37291 469 aaKnown RBP4.51□□□□□ -1.69
LOC1YFR001W CTF8P38877 133 aa4.51□□□□□ -1.69
LOC1YFR001W EXG2P52911 562 aa4.51□□□□□ -1.69
LOC1YFR001W LRS4Q04087 347 aaKnown RBP4.51□□□□□ -1.69
LOC1YFR001W MET6P05694 767 aaKnown RBP4.5□□□□□ -1.69
LOC1YFR001W RRP14P36080 434 aaKnown RBP4.5□□□□□ -1.69
LOC1YFR001W PUS2P53167 370 aa4.5□□□□□ -1.69
LOC1YFR001W ALG12P53730 551 aa4.5□□□□□ -1.69
LOC1YFR001W HAL9Q12180 1030 aa4.5□□□□□ -1.69
LOC1YFR001W KAR4P25583 335 aa4.49□□□□□ -1.69
LOC1YFR001W DCG1P32460 244 aa4.49□□□□□ -1.69
LOC1YFR001W PPG1P32838 368 aa4.49□□□□□ -1.69
LOC1YFR001W MTC2P34246 357 aa4.49□□□□□ -1.69
LOC1YFR001W NMD2P38798 1089 aaKnown RBP4.49□□□□□ -1.69
LOC1YFR001W HXT16P47185 567 aa4.49□□□□□ -1.69
LOC1YFR001W DUS1P53759 423 aaKnown RBP4.49□□□□□ -1.69
LOC1YFR001W SLU7Q02775 382 aaKnown RBP4.49□□□□□ -1.69
LOC1YFR001W UGO1Q03327 502 aa4.49□□□□□ -1.69
LOC1YFR001W POB3Q04636 552 aaKnown RBP4.49□□□□□ -1.69
LOC1YFR001W RSC3Q06639 885 aa4.49□□□□□ -1.69
LOC1YFR001W GUP2Q08929 609 aa4.49□□□□□ -1.69
LOC1YFR001W YOR022CQ12204 715 aa4.49□□□□□ -1.69
LOC1YFR001W PRC1P00729 532 aa4.48□□□□□ -1.69
LOC1YFR001W MEF1P25039 761 aa4.48□□□□□ -1.69
LOC1YFR001W PER1P25625 357 aa4.48□□□□□ -1.69
LOC1YFR001W SEC21P32074 935 aaKnown RBP4.48□□□□□ -1.69
LOC1YFR001W PEX6P33760 1030 aa4.48□□□□□ -1.69
LOC1YFR001W YHR078WP38799 552 aa4.48□□□□□ -1.69
LOC1YFR001W ZDS1P50111 915 aaKnown RBP4.48□□□□□ -1.69
LOC1YFR001W GSF2Q04697 403 aaKnown RBP4.48□□□□□ -1.69
LOC1YFR001W YBR182C-AQ8TGU6 64 aa4.48□□□□□ -1.69
LOC1YFR001W CDC9P04819 755 aa4.47□□□□□ -1.69
LOC1YFR001W PMA1P05030 918 aaKnown RBP4.47□□□□□ -1.69
LOC1YFR001W HCM1P25364 564 aa4.47□□□□□ -1.69
LOC1YFR001W SAP190P36123 1033 aa4.47□□□□□ -1.69
LOC1YFR001W DSS1P39112 969 aa4.47□□□□□ -1.69
LOC1YFR001W RLP7P40693 322 aaKnown RBP4.47□□□□□ -1.69
LOC1YFR001W ENB1Q08299 606 aa4.47□□□□□ -1.69
LOC1YFR001W THI21Q08975 551 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms