RNA–Protein interactions for RNA: YFL048C

EMP47, Transcript of Integral membrane component of ER-derived COPII-coated vesicles, yeast

Gene EMP47, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EMP47	YFL048C	TY4B-H	P0C2J7	1802 aa		4.98	□□□□□ -1.61
EMP47	YFL048C	TY4B-J	P47024	1803 aa		4.98	□□□□□ -1.61
EMP47	YFL048C	YRF1-2	P40105	1681 aa		4.98	□□□□□ -1.61
EMP47	YFL048C	ADE6	P38972	1358 aa	Known RBP	4.98	□□□□□ -1.61
EMP47	YFL048C	YGL081W	P53156	320 aa		4.97	□□□□□ -1.61
EMP47	YFL048C	YGR053C	P53234	283 aa		4.97	□□□□□ -1.61
EMP47	YFL048C	SPO20	Q04359	397 aa		4.97	□□□□□ -1.61
EMP47	YFL048C	RKM4	Q12504	494 aa		4.97	□□□□□ -1.61
EMP47	YFL048C	BAS1	P22035	811 aa		4.97	□□□□□ -1.61
EMP47	YFL048C	MAM1	P40065	302 aa		4.97	□□□□□ -1.61
EMP47	YFL048C	MAD1	P40957	749 aa		4.97	□□□□□ -1.61
EMP47	YFL048C	KRI1	P42846	591 aa	Known RBP	4.97	□□□□□ -1.61
EMP47	YFL048C	NPA3	P47122	385 aa		4.97	□□□□□ -1.61
EMP47	YFL048C	RSC1	P53236	928 aa		4.97	□□□□□ -1.61
EMP47	YFL048C	COG8	Q04632	607 aa		4.97	□□□□□ -1.61
EMP47	YFL048C	RPL11A	P0C0W9	174 aa	Known RBP	4.96	□□□□□ -1.62
EMP47	YFL048C	INO1	P11986	533 aa		4.96	□□□□□ -1.62
EMP47	YFL048C	PRP6	P19735	899 aa	Predicted RBP	4.96	□□□□□ -1.62
EMP47	YFL048C	YFL054C	P43549	646 aa		4.96	□□□□□ -1.62
EMP47	YFL048C	RIM8	P53179	542 aa		4.96	□□□□□ -1.62
EMP47	YFL048C	VPS20	Q04272	221 aa		4.96	□□□□□ -1.62
EMP47	YFL048C	SPP382	Q06411	708 aa	Predicted RBP	4.96	□□□□□ -1.62
EMP47	YFL048C	ATG13	Q06628	738 aa		4.96	□□□□□ -1.62
EMP47	YFL048C	BMS1	Q08965	1183 aa	Known RBP	4.96	□□□□□ -1.62
EMP47	YFL048C	ACM1	Q08981	209 aa		4.96	□□□□□ -1.62
EMP47	YFL048C	PIN2	Q12057	282 aa		4.96	□□□□□ -1.62
EMP47	YFL048C	RPL11B	Q3E757	174 aa	Predicted RBP	4.96	□□□□□ -1.62
EMP47	YFL048C	DUR1,2	P32528	1835 aa	Known RBP	4.95	□□□□□ -1.62
EMP47	YFL048C	ROM2	P51862	1356 aa	Known RBP	4.95	□□□□□ -1.62
EMP47	YFL048C	SOD2	P00447	233 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	THS1	P04801	734 aa	Known RBP	4.95	□□□□□ -1.62
EMP47	YFL048C	RPS19A	P07280	144 aa	Known RBP	4.95	□□□□□ -1.62
EMP47	YFL048C	RPS19B	P07281	144 aa	Predicted RBP	4.95	□□□□□ -1.62
EMP47	YFL048C	RAD24	P32641	659 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	YKL107W	P34251	309 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	RFC5	P38251	354 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	PNT1	P38969	423 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	GEM1	P39722	662 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	FAA4	P47912	694 aa	Known RBP	4.95	□□□□□ -1.62
EMP47	YFL048C	GDE1	Q02979	1223 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	VPS16	Q03308	798 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	RSM24	Q03976	319 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	LCD1	Q04377	747 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	YOR352W	Q08816	343 aa		4.95	□□□□□ -1.62
EMP47	YFL048C	URB1	P34241	1764 aa	Known RBP	4.94	□□□□□ -1.62
EMP47	YFL048C	HSP104	P31539	908 aa	Known RBP	4.94	□□□□□ -1.62
EMP47	YFL048C	MOT2	P34909	587 aa	Known RBP	4.94	□□□□□ -1.62
EMP47	YFL048C	UGA2	P38067	497 aa		4.94	□□□□□ -1.62
EMP47	YFL048C	RKM3	P38222	552 aa		4.94	□□□□□ -1.62
EMP47	YFL048C	AIM3	P38266	947 aa	Known RBP	4.94	□□□□□ -1.62
EMP47	YFL048C	BDH2	P39713	417 aa		4.94	□□□□□ -1.62
EMP47	YFL048C	MXR1	P40029	184 aa		4.94	□□□□□ -1.62
EMP47	YFL048C	MAK10	Q02197	733 aa		4.94	□□□□□ -1.62
EMP47	YFL048C	SGD1	Q06132	899 aa		4.94	□□□□□ -1.62
EMP47	YFL048C	JIP5	Q06214	492 aa	Predicted RBP	4.94	□□□□□ -1.62
EMP47	YFL048C	SVS1	Q12254	260 aa		4.94	□□□□□ -1.62
EMP47	YFL048C	FKS3	Q04952	1785 aa		4.94	□□□□□ -1.62
EMP47	YFL048C	VAS1	P07806	1104 aa	Known RBP	4.93	□□□□□ -1.62
EMP47	YFL048C	RNR2	P09938	399 aa	Known RBP	4.93	□□□□□ -1.62
EMP47	YFL048C	KIN2	P13186	1147 aa	Known RBP	4.93	□□□□□ -1.62
EMP47	YFL048C	THI80	P35202	319 aa		4.93	□□□□□ -1.62
EMP47	YFL048C	ABZ1	P37254	787 aa	Predicted RBP	4.93	□□□□□ -1.62
EMP47	YFL048C	CIR1	P42940	261 aa		4.93	□□□□□ -1.62
EMP47	YFL048C	YGL176C	P46945	554 aa		4.93	□□□□□ -1.62
EMP47	YFL048C	CWC24	P53769	259 aa		4.93	□□□□□ -1.62
EMP47	YFL048C	MDG1	P53885	366 aa		4.93	□□□□□ -1.62
EMP47	YFL048C	YPL066W	Q12194	479 aa		4.93	□□□□□ -1.62
EMP47	YFL048C	CYC1	P00044	109 aa	Predicted RBP	4.92	□□□□□ -1.62
EMP47	YFL048C	RPS13	P05756	151 aa	Known RBP	4.92	□□□□□ -1.62
EMP47	YFL048C	CDC16	P09798	840 aa		4.92	□□□□□ -1.62
EMP47	YFL048C	BIK1	P11709	440 aa		4.92	□□□□□ -1.62
EMP47	YFL048C	DBP2	P24783	546 aa	Known RBP	4.92	□□□□□ -1.62
EMP47	YFL048C	SWC3	P31376	625 aa		4.92	□□□□□ -1.62
EMP47	YFL048C	RPN12	P32496	274 aa		4.92	□□□□□ -1.62
EMP47	YFL048C	GCD7	P32502	381 aa	Predicted RBP	4.92	□□□□□ -1.62
EMP47	YFL048C	SLA2	P33338	968 aa		4.92	□□□□□ -1.62
EMP47	YFL048C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
EMP47	YFL048C	PIL1	P53252	339 aa	Known RBP	4.92	□□□□□ -1.62
EMP47	YFL048C	HST1	P53685	503 aa		4.92	□□□□□ -1.62
EMP47	YFL048C	HRQ1	Q05549	1077 aa		4.92	□□□□□ -1.62
EMP47	YFL048C	YLR225C	Q05948	407 aa	Known RBP	4.92	□□□□□ -1.62
EMP47	YFL048C	LYS2	P07702	1392 aa		4.91	□□□□□ -1.62
EMP47	YFL048C	ACE2	P21192	770 aa		4.91	□□□□□ -1.62
EMP47	YFL048C	LAM1	P38851	1228 aa		4.91	□□□□□ -1.62
EMP47	YFL048C	SIZ1	Q04195	904 aa		4.91	□□□□□ -1.62
EMP47	YFL048C	YPL277C	Q08989	487 aa		4.91	□□□□□ -1.62
EMP47	YFL048C	NOP58	Q12499	511 aa	Known RBP	4.91	□□□□□ -1.62
EMP47	YFL048C	BI4	P03879	638 aa		4.9	□□□□□ -1.63
EMP47	YFL048C	MRP7	P12687	371 aa		4.9	□□□□□ -1.63
EMP47	YFL048C	AGP1	P25376	633 aa		4.9	□□□□□ -1.63
EMP47	YFL048C	SBA1	P28707	216 aa	Known RBP	4.9	□□□□□ -1.63
EMP47	YFL048C	DID4	P36108	232 aa		4.9	□□□□□ -1.63
EMP47	YFL048C	SIP5	P40210	489 aa	Known RBP	4.9	□□□□□ -1.63
EMP47	YFL048C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
EMP47	YFL048C	YDR132C	Q03900	495 aa		4.9	□□□□□ -1.63
EMP47	YFL048C	FAL1	Q12099	399 aa	Known RBP	4.9	□□□□□ -1.63
EMP47	YFL048C	RIB2	Q12362	591 aa	Known RBP	4.9	□□□□□ -1.63
EMP47	YFL048C	RAD4	P14736	754 aa		4.89	□□□□□ -1.63
EMP47	YFL048C	CMP2	P14747	604 aa		4.89	□□□□□ -1.63
EMP47	YFL048C	APL1	P27351	700 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms