RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W SEC20P28791 383 aa2.91□□□□□ -1.94
YCK3YER123W TYW3P53177 273 aa2.91□□□□□ -1.94
YCK3YER123W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
YCK3YER123W SSL1Q04673 461 aaPredicted RBP2.91□□□□□ -1.94
YCK3YER123W NOT3P06102 836 aaKnown RBP2.91□□□□□ -1.94
YCK3YER123W CDC12P32468 407 aaKnown RBP2.91□□□□□ -1.94
YCK3YER123W YBR053CP38235 358 aa2.91□□□□□ -1.94
YCK3YER123W RPP1P38786 293 aa2.91□□□□□ -1.94
YCK3YER123W RIM13Q03792 727 aa2.91□□□□□ -1.94
YCK3YER123W AMA1P50082 593 aa2.9□□□□□ -1.95
YCK3YER123W YGR053CP53234 283 aa2.9□□□□□ -1.95
YCK3YER123W MRPS35P53292 345 aa2.9□□□□□ -1.95
YCK3YER123W VPS30Q02948 557 aa2.9□□□□□ -1.95
YCK3YER123W SEG1Q04279 960 aa2.9□□□□□ -1.95
YCK3YER123W RPN13O13563 156 aa2.89□□□□□ -1.95
YCK3YER123W STE13P33894 931 aa2.89□□□□□ -1.95
YCK3YER123W YKR078WP36158 585 aaKnown RBP2.89□□□□□ -1.95
YCK3YER123W CBR1P38626 284 aaKnown RBP2.89□□□□□ -1.95
YCK3YER123W BPL1P48445 690 aaPredicted RBP2.89□□□□□ -1.95
YCK3YER123W SSL2Q00578 843 aa2.89□□□□□ -1.95
YCK3YER123W SGO1Q08490 590 aa2.89□□□□□ -1.95
YCK3YER123W RGT2Q12300 763 aa2.89□□□□□ -1.95
YCK3YER123W MON2P48563 1636 aaPredicted RBP2.88□□□□□ -1.95
YCK3YER123W HOM2P13663 365 aaKnown RBP2.88□□□□□ -1.95
YCK3YER123W MCM2P29469 868 aa2.88□□□□□ -1.95
YCK3YER123W CTF8P38877 133 aa2.88□□□□□ -1.95
YCK3YER123W ESF1Q06344 628 aaKnown RBP2.88□□□□□ -1.95
YCK3YER123W PTP1P25044 335 aa2.87□□□□□ -1.95
YCK3YER123W PIN4P34217 668 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
YCK3YER123W YJL206CP39529 758 aa2.87□□□□□ -1.95
YCK3YER123W YEL020CP39994 560 aa2.87□□□□□ -1.95
YCK3YER123W BNA3P47039 444 aaKnown RBP2.87□□□□□ -1.95
YCK3YER123W MPS1P54199 764 aa2.87□□□□□ -1.95
YCK3YER123W CDC48P25694 835 aaKnown RBP2.87□□□□□ -1.95
YCK3YER123W TSL1P38427 1098 aaKnown RBP2.87□□□□□ -1.95
YCK3YER123W EEB1Q02891 456 aa2.87□□□□□ -1.95
YCK3YER123W SPO20Q04359 397 aa2.87□□□□□ -1.95
YCK3YER123W TAF3Q12297 353 aa2.87□□□□□ -1.95
YCK3YER123W INO80P53115 1489 aa2.86□□□□□ -1.95
YCK3YER123W MGE1P38523 228 aa2.86□□□□□ -1.95
YCK3YER123W YIL108WP40483 696 aaKnown RBP2.86□□□□□ -1.95
YCK3YER123W YLR225CQ05948 407 aaKnown RBP2.86□□□□□ -1.95
YCK3YER123W VPS34P22543 875 aa2.85□□□□□ -1.95
YCK3YER123W EMP70P32802 667 aa2.85□□□□□ -1.95
YCK3YER123W DUT1P33317 147 aa2.85□□□□□ -1.95
YCK3YER123W YBR238CP38330 731 aaKnown RBP2.85□□□□□ -1.95
YCK3YER123W LTP1P40347 161 aa2.85□□□□□ -1.95
YCK3YER123W NET1P47035 1189 aa2.85□□□□□ -1.95
YCK3YER123W YKE2P52553 114 aa2.85□□□□□ -1.95
YCK3YER123W SMX3P54999 86 aaPredicted RBP2.85□□□□□ -1.95
YCK3YER123W TDA9Q04545 1251 aa2.85□□□□□ -1.95
YCK3YER123W SPR28Q04921 423 aa2.85□□□□□ -1.95
YCK3YER123W IRC13Q08630 104 aa2.85□□□□□ -1.95
YCK3YER123W RPD3P32561 433 aa2.84□□□□□ -1.95
YCK3YER123W DUS3Q06053 668 aaKnown RBP2.84□□□□□ -1.95
YCK3YER123W IPL1P38991 367 aa2.83□□□□□ -1.96
YCK3YER123W FMP52P40008 231 aa2.83□□□□□ -1.96
YCK3YER123W YIR042CP40586 236 aa2.83□□□□□ -1.96
YCK3YER123W HSV2P50079 448 aaPredicted RBP2.83□□□□□ -1.96
YCK3YER123W TEL2P53038 688 aa2.83□□□□□ -1.96
YCK3YER123W HIS7P33734 552 aaKnown RBP2.83□□□□□ -1.96
YCK3YER123W CCT7P42943 550 aaKnown RBP2.83□□□□□ -1.96
YCK3YER123W CDC34P14682 295 aa2.82□□□□□ -1.96
YCK3YER123W PRP4P20053 465 aaKnown RBP2.82□□□□□ -1.96
YCK3YER123W TYE7P33122 291 aaPredicted RBP2.82□□□□□ -1.96
YCK3YER123W YHR078WP38799 552 aa2.82□□□□□ -1.96
YCK3YER123W GGA2P38817 585 aaKnown RBP2.82□□□□□ -1.96
YCK3YER123W PAC2P39937 518 aa2.82□□□□□ -1.96
YCK3YER123W VHR1P40522 640 aa2.82□□□□□ -1.96
YCK3YER123W PKH1Q03407 766 aa2.82□□□□□ -1.96
YCK3YER123W OSW1Q08692 278 aa2.82□□□□□ -1.96
YCK3YER123W YLR149CQ99296 730 aa2.82□□□□□ -1.96
YCK3YER123W MEP2P41948 499 aa2.81□□□□□ -1.96
YCK3YER123W LAT1P12695 482 aaKnown RBP2.8□□□□□ -1.96
YCK3YER123W NGG1P32494 702 aa2.8□□□□□ -1.96
YCK3YER123W MET10P39692 1035 aa2.8□□□□□ -1.96
YCK3YER123W FYV10P40492 516 aa2.8□□□□□ -1.96
YCK3YER123W ASI2P53895 289 aa2.8□□□□□ -1.96
YCK3YER123W YKR011CQ02209 353 aa2.8□□□□□ -1.96
YCK3YER123W CIR2Q08822 631 aa2.8□□□□□ -1.96
YCK3YER123W MPH2P0CD99 609 aa2.79□□□□□ -1.96
YCK3YER123W STE4P18851 423 aa2.79□□□□□ -1.96
YCK3YER123W NDC80P40460 691 aa2.79□□□□□ -1.96
YCK3YER123W YJR107WP47145 328 aa2.79□□□□□ -1.96
YCK3YER123W YAP1802P53309 568 aa2.79□□□□□ -1.96
YCK3YER123W RFA1P22336 621 aaKnown RBP2.78□□□□□ -1.96
YCK3YER123W BCD1P38772 366 aa2.78□□□□□ -1.96
YCK3YER123W RSP5P39940 809 aaKnown RBP2.78□□□□□ -1.96
YCK3YER123W XBP1P40489 647 aa2.78□□□□□ -1.96
YCK3YER123W NRG1Q03125 231 aa2.78□□□□□ -1.96
YCK3YER123W RMD1Q03441 430 aa2.78□□□□□ -1.96
YCK3YER123W NPP1P25353 742 aa2.78□□□□□ -1.96
YCK3YER123W MBP1P39678 833 aa2.78□□□□□ -1.96
YCK3YER123W CEP3P40969 608 aa2.78□□□□□ -1.96
YCK3YER123W GUS1P46655 708 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
YCK3YER123W MRK1P50873 501 aa2.78□□□□□ -1.96
YCK3YER123W ESC2Q06340 456 aa2.78□□□□□ -1.96
YCK3YER123W PGK1P00560 416 aaKnown RBP2.77□□□□□ -1.97
YCK3YER123W CLN2P20438 545 aa2.77□□□□□ -1.97
YCK3YER123W GLG1P36143 616 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms