RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeastyeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAC8YEL013W RKM4Q12504 494 aa4.06□□□□□ -1.76
VAC8YEL013W FIG2P25653 1609 aa4.05□□□□□ -1.76
VAC8YEL013W FAS2P19097 1887 aaKnown RBP4.05□□□□□ -1.76
VAC8YEL013W RPL11AP0C0W9 174 aaKnown RBP4.05□□□□□ -1.76
VAC8YEL013W SPE2P21182 396 aa4.05□□□□□ -1.76
VAC8YEL013W YKL107WP34251 309 aa4.05□□□□□ -1.76
VAC8YEL013W YFL054CP43549 646 aa4.05□□□□□ -1.76
VAC8YEL013W OPI10Q08202 246 aa4.05□□□□□ -1.76
VAC8YEL013W CTI6Q08923 506 aa4.05□□□□□ -1.76
VAC8YEL013W RPL11BQ3E757 174 aaPredicted RBP4.05□□□□□ -1.76
VAC8YEL013W SNF5P18480 905 aa4.04□□□□□ -1.76
VAC8YEL013W ABD1P32783 436 aaPredicted RBP4.04□□□□□ -1.76
VAC8YEL013W PIN4P34217 668 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76not detected
VAC8YEL013W ECL1P48235 211 aa4.04□□□□□ -1.76
VAC8YEL013W WRS1Q12109 432 aaKnown RBP4.04□□□□□ -1.76
VAC8YEL013W MSM1P22438 575 aa4.04□□□□□ -1.76
VAC8YEL013W DBP2P24783 546 aaKnown RBP4.04□□□□□ -1.76
VAC8YEL013W SEG2P34250 1132 aa4.04□□□□□ -1.76
VAC8YEL013W TIM50Q02776 476 aa4.04□□□□□ -1.76
VAC8YEL013W ESC2Q06340 456 aa4.04□□□□□ -1.76
VAC8YEL013W RFC5P38251 354 aa4.03□□□□□ -1.76
VAC8YEL013W GEM1P39722 662 aa4.03□□□□□ -1.76
VAC8YEL013W SEC26P41810 973 aaKnown RBP4.03□□□□□ -1.76
VAC8YEL013W YGR117CP53270 476 aa4.03□□□□□ -1.76
VAC8YEL013W ACM1Q08981 209 aa4.03□□□□□ -1.76
VAC8YEL013W YPL066WQ12194 479 aa4.03□□□□□ -1.76
VAC8YEL013W GRX6Q12438 231 aa4.03□□□□□ -1.76
VAC8YEL013W LPD1P09624 499 aaKnown RBP4.02□□□□□ -1.77
VAC8YEL013W AGP1P25376 633 aa4.02□□□□□ -1.77
VAC8YEL013W PNT1P38969 423 aa4.02□□□□□ -1.77
VAC8YEL013W YBP2P53169 641 aa4.02□□□□□ -1.77
VAC8YEL013W YOR352WQ08816 343 aa4.02□□□□□ -1.77
VAC8YEL013W SVS1Q12254 260 aa4.02□□□□□ -1.77
VAC8YEL013W YML133CQ03099 1374 aa4.02□□□□□ -1.77
VAC8YEL013W GAS1P22146 559 aaKnown RBP4.01□□□□□ -1.77
VAC8YEL013W SBA1P28707 216 aaKnown RBP4.01□□□□□ -1.77
VAC8YEL013W YKL069WP36088 180 aa4.01□□□□□ -1.77
VAC8YEL013W VBA5P36172 582 aa4.01□□□□□ -1.77
VAC8YEL013W APE3P37302 537 aaKnown RBP4.01□□□□□ -1.77
VAC8YEL013W MBP1P39678 833 aa4.01□□□□□ -1.77
VAC8YEL013W ENV11P53246 860 aa4.01□□□□□ -1.77
VAC8YEL013W MRPL22P53881 309 aa4.01□□□□□ -1.77
VAC8YEL013W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
VAC8YEL013W RSM24Q03976 319 aa4.01□□□□□ -1.77
VAC8YEL013W CSR2Q12734 1121 aa4.01□□□□□ -1.77
VAC8YEL013W TOR2P32600 2474 aaKnown RBP4□□□□□ -1.77
VAC8YEL013W SIP5P40210 489 aaKnown RBP4□□□□□ -1.77
VAC8YEL013W RRT6P53117 311 aaPredicted RBP4□□□□□ -1.77
VAC8YEL013W TDA5Q06417 326 aaKnown RBP4□□□□□ -1.77
VAC8YEL013W IRC3Q06683 689 aa4□□□□□ -1.77
VAC8YEL013W DIB1Q06819 143 aaPredicted RBP4□□□□□ -1.77
VAC8YEL013W BDF2Q07442 638 aa4□□□□□ -1.77
VAC8YEL013W FBP1P09201 348 aa3.99□□□□□ -1.77
VAC8YEL013W RNQ1P25367 405 aa3.99□□□□□ -1.77
VAC8YEL013W APL1P27351 700 aa3.99□□□□□ -1.77
VAC8YEL013W SNO2P53823 222 aa3.99□□□□□ -1.77
VAC8YEL013W SHE9Q04172 456 aa3.99□□□□□ -1.77
VAC8YEL013W LYS2P07702 1392 aa3.99□□□□□ -1.77
VAC8YEL013W CYC1P00044 109 aaPredicted RBP3.98□□□□□ -1.77
VAC8YEL013W BI4P03879 638 aa3.98□□□□□ -1.77
VAC8YEL013W KIN2P13186 1147 aaKnown RBP3.98□□□□□ -1.77
VAC8YEL013W SLA2P33338 968 aa3.98□□□□□ -1.77
VAC8YEL013W YDL177CQ12257 170 aa3.98□□□□□ -1.77
VAC8YEL013W ACE2P21192 770 aa3.98□□□□□ -1.77
VAC8YEL013W MRP8P35719 219 aa3.98□□□□□ -1.77
VAC8YEL013W ABZ1P37254 787 aaPredicted RBP3.98□□□□□ -1.77
VAC8YEL013W BUD27P43573 796 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
VAC8YEL013W MDG1P53885 366 aa3.98□□□□□ -1.77
VAC8YEL013W SAH1P39954 449 aaKnown RBP3.97□□□□□ -1.77
VAC8YEL013W SPF1P39986 1215 aaKnown RBP3.97□□□□□ -1.77
VAC8YEL013W NIT1P40447 199 aa3.97□□□□□ -1.77
VAC8YEL013W IRR1P40541 1150 aa3.97□□□□□ -1.77
VAC8YEL013W IRC24P40580 263 aa3.97□□□□□ -1.77
VAC8YEL013W SRP1Q02821 542 aaKnown RBP3.97□□□□□ -1.77
VAC8YEL013W PMD1P32634 1753 aa3.97□□□□□ -1.77
VAC8YEL013W YMR084WA2P2R3 262 aa3.96□□□□□ -1.78
VAC8YEL013W CAF20P12962 161 aaKnown RBP3.96□□□□□ -1.78
VAC8YEL013W CMP2P14747 604 aa3.96□□□□□ -1.78
VAC8YEL013W PBY1P38254 753 aa3.96□□□□□ -1.78
VAC8YEL013W YBR184WP38299 523 aa3.96□□□□□ -1.78
VAC8YEL013W UBP16Q02863 499 aa3.96□□□□□ -1.78
VAC8YEL013W ROT1Q03691 256 aa3.96□□□□□ -1.78
VAC8YEL013W RBA50Q04418 439 aa3.96□□□□□ -1.78
VAC8YEL013W SGD1Q06132 899 aa3.96□□□□□ -1.78
VAC8YEL013W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
VAC8YEL013W SSF2Q12153 453 aaPredicted RBP3.96□□□□□ -1.78
VAC8YEL013W SEC3P33332 1336 aaKnown RBP3.96□□□□□ -1.78
VAC8YEL013W NUP145P49687 1317 aa3.96□□□□□ -1.78
VAC8YEL013W GSC2P40989 1895 aa3.96□□□□□ -1.78
VAC8YEL013W UTP10P42945 1769 aaKnown RBP3.96□□□□□ -1.78
VAC8YEL013W ELM1P32801 640 aa3.95□□□□□ -1.78
VAC8YEL013W YFR016CP43597 1233 aaKnown RBP3.95□□□□□ -1.78
VAC8YEL013W DUS3Q06053 668 aaKnown RBP3.95□□□□□ -1.78
VAC8YEL013W YDR306CQ06640 478 aa3.95□□□□□ -1.78
VAC8YEL013W OSW2Q12202 724 aa3.95□□□□□ -1.78
VAC8YEL013W HPR1P17629 752 aaKnown RBP3.95□□□□□ -1.78
VAC8YEL013W STE5P32917 917 aa3.95□□□□□ -1.78
VAC8YEL013W TSA1P34760 196 aaKnown RBP3.95□□□□□ -1.78
VAC8YEL013W AIM3P38266 947 aaKnown RBP3.95□□□□□ -1.78
VAC8YEL013W LAM1P38851 1228 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms