RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected
UBC8	YEL012W	YAR028W	P39548	234 aa		5.22	□□□□□ -1.57
UBC8	YEL012W	LSB3	P43603	459 aa	Known RBP	5.22	□□□□□ -1.57
UBC8	YEL012W	GYP7	P48365	746 aa		5.22	□□□□□ -1.57
UBC8	YEL012W	SRT1	Q03175	343 aa		5.22	□□□□□ -1.57
UBC8	YEL012W	GIN4	Q12263	1142 aa		5.22	□□□□□ -1.57
UBC8	YEL012W	SAC3	P46674	1301 aa		5.22	□□□□□ -1.57
UBC8	YEL012W	TOR2	P32600	2474 aa	Known RBP	5.21	□□□□□ -1.57
UBC8	YEL012W	RPL8B	P29453	256 aa	Known RBP	5.21	□□□□□ -1.58
UBC8	YEL012W	MRP8	P35719	219 aa		5.21	□□□□□ -1.58
UBC8	YEL012W	BRN1	P38170	754 aa		5.21	□□□□□ -1.58
UBC8	YEL012W	ALG3	P38179	458 aa		5.21	□□□□□ -1.58
UBC8	YEL012W	YJR008W	P47085	338 aa		5.21	□□□□□ -1.58
UBC8	YEL012W	NCE103	P53615	221 aa		5.21	□□□□□ -1.58
UBC8	YEL012W	ALG12	P53730	551 aa		5.21	□□□□□ -1.58
UBC8	YEL012W	YNR063W	P53749	607 aa		5.21	□□□□□ -1.58
UBC8	YEL012W	FAR11	P53917	953 aa		5.21	□□□□□ -1.58
UBC8	YEL012W	RKM4	Q12504	494 aa		5.21	□□□□□ -1.58
UBC8	YEL012W	FLO1	P32768	1537 aa		5.21	□□□□□ -1.58
UBC8	YEL012W	MAE1	P36013	669 aa	Known RBP	5.2	□□□□□ -1.58
UBC8	YEL012W	RRP14	P36080	434 aa	Known RBP	5.2	□□□□□ -1.58
UBC8	YEL012W	RSP5	P39940	809 aa	Known RBP	5.2	□□□□□ -1.58
UBC8	YEL012W	PSF2	P40359	213 aa		5.2	□□□□□ -1.58
UBC8	YEL012W	IRR1	P40541	1150 aa		5.2	□□□□□ -1.58
UBC8	YEL012W	NSG2	P53898	299 aa		5.2	□□□□□ -1.58
UBC8	YEL012W	HEF3	P53978	1044 aa	Known RBP	5.2	□□□□□ -1.58
UBC8	YEL012W	THI72	Q08579	599 aa		5.2	□□□□□ -1.58
UBC8	YEL012W	FLC1	Q08967	793 aa		5.2	□□□□□ -1.58
UBC8	YEL012W	TY1A-NL1	Q12391	440 aa	Known RBP	5.2	□□□□□ -1.58
UBC8	YEL012W	YOR131C	Q12486	218 aa		5.2	□□□□□ -1.58
UBC8	YEL012W	AI1	P03875	834 aa		5.19	□□□□□ -1.58
UBC8	YEL012W	MLS1	P30952	554 aa		5.19	□□□□□ -1.58
UBC8	YEL012W	TIM23	P32897	222 aa		5.19	□□□□□ -1.58
UBC8	YEL012W	PBY1	P38254	753 aa		5.19	□□□□□ -1.58
UBC8	YEL012W	RGD1	P38339	666 aa		5.19	□□□□□ -1.58
UBC8	YEL012W	RRM3	P38766	723 aa		5.19	□□□□□ -1.58
UBC8	YEL012W	MBP1	P39678	833 aa		5.19	□□□□□ -1.58
UBC8	YEL012W	SIP5	P40210	489 aa	Known RBP	5.19	□□□□□ -1.58
UBC8	YEL012W	SBE2	P42223	864 aa	Known RBP	5.19	□□□□□ -1.58
UBC8	YEL012W	YGL176C	P46945	554 aa		5.19	□□□□□ -1.58
UBC8	YEL012W	ELA1	P53861	379 aa	Predicted RBP	5.19	□□□□□ -1.58
UBC8	YEL012W	ACK1	Q07622	623 aa	Predicted RBP	5.19	□□□□□ -1.58
UBC8	YEL012W	YLL054C	Q12244	843 aa		5.19	□□□□□ -1.58
UBC8	YEL012W	PTC5	Q12511	572 aa		5.19	□□□□□ -1.58
UBC8	YEL012W	SBP1	P10080	294 aa	Known RBP	5.18	□□□□□ -1.58
UBC8	YEL012W	RAD53	P22216	821 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	RAD24	P32641	659 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	YKL107W	P34251	309 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	MCM7	P38132	845 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	ERG7	P38604	731 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	NUP82	P40368	713 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	YIR042C	P40586	236 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	KRI1	P42846	591 aa	Known RBP	5.18	□□□□□ -1.58
UBC8	YEL012W	OSW7	P43611	510 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	HNT2	P49775	206 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	VPS62	P53285	467 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	DSE4	P53753	1117 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	DOT1	Q04089	582 aa	Known RBP	5.18	□□□□□ -1.58
UBC8	YEL012W	RSA3	Q05942	220 aa	Known RBP	5.18	□□□□□ -1.58
UBC8	YEL012W	YOR223W	Q12015	292 aa		5.18	□□□□□ -1.58
UBC8	YEL012W	CIT1	P00890	479 aa		5.17	□□□□□ -1.58
UBC8	YEL012W	PMA1	P05030	918 aa	Known RBP	5.17	□□□□□ -1.58
UBC8	YEL012W	PPG1	P32838	368 aa		5.17	□□□□□ -1.58
UBC8	YEL012W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
UBC8	YEL012W	QNS1	P38795	714 aa	Known RBP	5.17	□□□□□ -1.58
UBC8	YEL012W	YFL066C	P43538	392 aa		5.17	□□□□□ -1.58
UBC8	YEL012W	YFH7	P43591	353 aa		5.17	□□□□□ -1.58
UBC8	YEL012W	YGR125W	P53273	1036 aa		5.17	□□□□□ -1.58
UBC8	YEL012W	UTP8	P53276	713 aa	Known RBP	5.17	□□□□□ -1.58
UBC8	YEL012W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
UBC8	YEL012W	AVO1	Q08236	1176 aa		5.17	□□□□□ -1.58
UBC8	YEL012W	TUB2	P02557	457 aa	Known RBP	5.16	□□□□□ -1.58
UBC8	YEL012W	SUP35	P05453	685 aa	Known RBP	5.16	□□□□□ -1.58
UBC8	YEL012W	ERR1	P0CX10	437 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	ERR2	P0CX11	437 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	YER152C	P10356	443 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	SNF3	P10870	884 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	ADP1	P25371	1049 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	UBP12	P39538	1254 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	BOI2	P39969	1040 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	VPS53	P47061	822 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	RTA1	P53047	317 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	BUD9	P53226	547 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	SPO75	Q07798	868 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	GNT1	Q12096	491 aa		5.16	□□□□□ -1.58
UBC8	YEL012W	TOR1	P35169	2470 aa		5.15	□□□□□ -1.58
UBC8	YEL012W	CAN1	P04817	590 aa		5.15	□□□□□ -1.59
UBC8	YEL012W	HSP60	P19882	572 aa	Known RBP	5.15	□□□□□ -1.59
UBC8	YEL012W	KIP1	P28742	1111 aa		5.15	□□□□□ -1.59
UBC8	YEL012W	HBS1	P32769	611 aa	Known RBP	5.15	□□□□□ -1.59
UBC8	YEL012W	PTK1	P36002	662 aa	Predicted RBP	5.15	□□□□□ -1.59
UBC8	YEL012W	GPT2	P36148	743 aa		5.15	□□□□□ -1.59
UBC8	YEL012W	ACA1	P39970	489 aa		5.15	□□□□□ -1.59
UBC8	YEL012W	MSH4	P40965	878 aa	Predicted RBP	5.15	□□□□□ -1.59
UBC8	YEL012W	YLR257W	Q06146	321 aa	Known RBP	5.15	□□□□□ -1.59
UBC8	YEL012W	UBX5	Q06682	500 aa		5.15	□□□□□ -1.59
UBC8	YEL012W	LAP2	Q10740	671 aa		5.15	□□□□□ -1.59
UBC8	YEL012W	SNU66	Q12420	587 aa	Predicted RBP	5.15	□□□□□ -1.59
UBC8	YEL012W	OSH2	Q12451	1283 aa		5.15	□□□□□ -1.59
UBC8	YEL012W	ADR1	P07248	1323 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms