RNA–Protein interactions for RNA: YEL011W

GLC3, Transcript of Glycogen branching enzyme, involved in glycogen accumulation, yeast

Gene GLC3, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GLC3	YEL011W	ISF1	P32488	338 aa		4.03	□□□□□ -1.76
GLC3	YEL011W	DOT1	Q04089	582 aa	Known RBP	4.03	□□□□□ -1.76
GLC3	YEL011W	YDR341C	Q05506	607 aa	Known RBP	4.03	□□□□□ -1.76
GLC3	YEL011W	MRD1	Q06106	887 aa	Known RBP	4.03	□□□□□ -1.76
GLC3	YEL011W	HFA1	P32874	2273 aa		4.03	□□□□□ -1.76
GLC3	YEL011W	PDE1	P22434	369 aa		4.03	□□□□□ -1.76
GLC3	YEL011W	KIP1	P28742	1111 aa		4.03	□□□□□ -1.76
GLC3	YEL011W	SPC110	P32380	944 aa		4.03	□□□□□ -1.76
GLC3	YEL011W	PET127	P32606	800 aa		4.03	□□□□□ -1.76
GLC3	YEL011W	CDA2	Q06703	312 aa		4.03	□□□□□ -1.76
GLC3	YEL011W	YOL024W	Q08172	172 aa		4.03	□□□□□ -1.76
GLC3	YEL011W	YOR022C	Q12204	715 aa		4.03	□□□□□ -1.76
GLC3	YEL011W	MTF1	P14908	341 aa	Known RBP	4.02	□□□□□ -1.77
GLC3	YEL011W	SIR1	P21691	654 aa		4.02	□□□□□ -1.77
GLC3	YEL011W	RSA4	P25382	515 aa	Known RBP	4.02	□□□□□ -1.77
GLC3	YEL011W	SWC3	P31376	625 aa		4.02	□□□□□ -1.77
GLC3	YEL011W	BCH2	P36122	765 aa		4.02	□□□□□ -1.77
GLC3	YEL011W	YHL050C	P38721	697 aa		4.02	□□□□□ -1.77
GLC3	YEL011W	NMD2	P38798	1089 aa	Known RBP	4.02	□□□□□ -1.77
GLC3	YEL011W	SLN1	P39928	1220 aa	Predicted RBP	4.02	□□□□□ -1.77
GLC3	YEL011W	DOT6	P40059	670 aa	Known RBP	4.02	□□□□□ -1.77
GLC3	YEL011W	CLU1	Q03690	1277 aa	Known RBP	4.02	□□□□□ -1.77
GLC3	YEL011W	SES1	P07284	462 aa	Known RBP	4.01	□□□□□ -1.77
GLC3	YEL011W	YJR061W	P40355	935 aa		4.01	□□□□□ -1.77
GLC3	YEL011W	RTT109	Q07794	436 aa		4.01	□□□□□ -1.77
GLC3	YEL011W	CDC45	Q08032	650 aa		4.01	□□□□□ -1.77
GLC3	YEL011W	ALR1	Q08269	859 aa		4.01	□□□□□ -1.77
GLC3	YEL011W	RVB2	Q12464	471 aa	Known RBP	4.01	□□□□□ -1.77
GLC3	YEL011W	CIT1	P00890	479 aa		4.01	□□□□□ -1.77
GLC3	YEL011W	DBP2	P24783	546 aa	Known RBP	4.01	□□□□□ -1.77
GLC3	YEL011W	PWP2	P25635	923 aa	Known RBP	4.01	□□□□□ -1.77
GLC3	YEL011W	RAD24	P32641	659 aa		4.01	□□□□□ -1.77
GLC3	YEL011W	AAP1	P37898	856 aa	Known RBP	4.01	□□□□□ -1.77
GLC3	YEL011W	TIF5	P38431	405 aa	Known RBP	4.01	□□□□□ -1.77
GLC3	YEL011W	ERV46	P39727	415 aa		4.01	□□□□□ -1.77
GLC3	YEL011W	SAH1	P39954	449 aa	Known RBP	4.01	□□□□□ -1.77
GLC3	YEL011W	VPS27	P40343	622 aa	Known RBP	4.01	□□□□□ -1.77
GLC3	YEL011W	TPM2	P40414	161 aa		4.01	□□□□□ -1.77
GLC3	YEL011W	FET5	P43561	622 aa		4.01	□□□□□ -1.77
GLC3	YEL011W	NRM1	P53718	249 aa		4.01	□□□□□ -1.77
GLC3	YEL011W	CCR4	P31384	837 aa	Known RBP	4	□□□□□ -1.77
GLC3	YEL011W	IMP2'	P32351	346 aa		4	□□□□□ -1.77
GLC3	YEL011W	PPX1	P38698	397 aa		4	□□□□□ -1.77
GLC3	YEL011W	GDH3	P39708	457 aa		4	□□□□□ -1.77
GLC3	YEL011W	OSW5	P40219	148 aa		4	□□□□□ -1.77
GLC3	YEL011W	IES1	P43579	692 aa		4	□□□□□ -1.77
GLC3	YEL011W	RMD8	P43620	662 aa		4	□□□□□ -1.77
GLC3	YEL011W	YPP1	P46951	817 aa		4	□□□□□ -1.77
GLC3	YEL011W	ZPR1	P53303	486 aa	Known RBP	4	□□□□□ -1.77
GLC3	YEL011W	KAR5	Q04746	504 aa		4	□□□□□ -1.77
GLC3	YEL011W	YBR056W-A	I2HB52	66 aa		4	□□□□□ -1.77
GLC3	YEL011W	HXK1	P04806	485 aa	Known RBP	4	□□□□□ -1.77
GLC3	YEL011W	ERG6	P25087	383 aa	Known RBP	4	□□□□□ -1.77
GLC3	YEL011W	SLX5	P32828	619 aa	Known RBP	4	□□□□□ -1.77
GLC3	YEL011W	RPT1	P33299	467 aa	Known RBP	4	□□□□□ -1.77
GLC3	YEL011W	SUM1	P46676	1062 aa		4	□□□□□ -1.77
GLC3	YEL011W	YGR122W	P53272	402 aa		4	□□□□□ -1.77
GLC3	YEL011W	TDA7	P53882	636 aa	Predicted RBP	4	□□□□□ -1.77
GLC3	YEL011W	FMP45	Q07651	309 aa		4	□□□□□ -1.77
GLC3	YEL011W	PCT1	P13259	424 aa		3.99	□□□□□ -1.77
GLC3	YEL011W	DAL82	P21705	255 aa		3.99	□□□□□ -1.77
GLC3	YEL011W	WSC4	P38739	605 aa		3.99	□□□□□ -1.77
GLC3	YEL011W	CTR9	P89105	1077 aa		3.99	□□□□□ -1.77
GLC3	YEL011W	ESC2	Q06340	456 aa		3.99	□□□□□ -1.77
GLC3	YEL011W	GLN3	P18494	730 aa		3.98	□□□□□ -1.77
GLC3	YEL011W	BRF1	P29056	596 aa		3.98	□□□□□ -1.77
GLC3	YEL011W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
GLC3	YEL011W	PCM1	P38628	557 aa	Known RBP	3.98	□□□□□ -1.77
GLC3	YEL011W	DJP1	P40564	432 aa		3.98	□□□□□ -1.77
GLC3	YEL011W	SAD1	P43589	448 aa		3.98	□□□□□ -1.77
GLC3	YEL011W	VPS25	P47142	202 aa		3.98	□□□□□ -1.77
GLC3	YEL011W	YDR061W	Q12298	539 aa		3.98	□□□□□ -1.77
GLC3	YEL011W	NOT3	P06102	836 aa	Known RBP	3.98	□□□□□ -1.77
GLC3	YEL011W	RPL8B	P29453	256 aa	Known RBP	3.98	□□□□□ -1.77
GLC3	YEL011W	YBR284W	P38150	797 aa		3.98	□□□□□ -1.77
GLC3	YEL011W	BTT1	P40314	149 aa	Predicted RBP	3.98	□□□□□ -1.77
GLC3	YEL011W	PIL1	P53252	339 aa	Known RBP	3.98	□□□□□ -1.77
GLC3	YEL011W	RCR2	Q03446	210 aa	Known RBP	3.98	□□□□□ -1.77
GLC3	YEL011W	PHM6	Q05637	104 aa		3.98	□□□□□ -1.77
GLC3	YEL011W	DSE3	Q08729	430 aa		3.98	□□□□□ -1.77
GLC3	YEL011W	NOP58	Q12499	511 aa	Known RBP	3.98	□□□□□ -1.77
GLC3	YEL011W	MSP1	P28737	362 aa		3.97	□□□□□ -1.77
GLC3	YEL011W	CYS3	P31373	394 aa	Known RBP	3.97	□□□□□ -1.77
GLC3	YEL011W	PEP7	P32609	515 aa		3.97	□□□□□ -1.77
GLC3	YEL011W	BIM1	P40013	344 aa		3.97	□□□□□ -1.77
GLC3	YEL011W	ACF4	P47129	309 aa		3.97	□□□□□ -1.77
GLC3	YEL011W	PDC6	P26263	563 aa	Known RBP	3.97	□□□□□ -1.77
GLC3	YEL011W	KNS1	P32350	737 aa	Predicted RBP	3.97	□□□□□ -1.77
GLC3	YEL011W	SWE1	P32944	819 aa		3.97	□□□□□ -1.77
GLC3	YEL011W	RRP8	P38961	392 aa	Known RBP	3.97	□□□□□ -1.77
GLC3	YEL011W	BIR1	P47134	954 aa		3.97	□□□□□ -1.77
GLC3	YEL011W	HEL2	Q05580	639 aa	Known RBP	3.97	□□□□□ -1.77
GLC3	YEL011W	APM4	Q99186	491 aa		3.97	□□□□□ -1.77
GLC3	YEL011W	POL2	P21951	2222 aa	Known RBP	3.96	□□□□□ -1.78
GLC3	YEL011W	PGK1	P00560	416 aa	Known RBP	3.96	□□□□□ -1.78
GLC3	YEL011W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
GLC3	YEL011W	RPS19A	P07280	144 aa	Known RBP	3.96	□□□□□ -1.78
GLC3	YEL011W	RPS19B	P07281	144 aa	Predicted RBP	3.96	□□□□□ -1.78
GLC3	YEL011W	RPL8A	P17076	256 aa	Known RBP	3.96	□□□□□ -1.78
GLC3	YEL011W	GUT1	P32190	709 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 70.2 ms