RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C ZRG8P40021 1076 aa4.39□□□□□ -1.71
VAB2YEL005C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
VAB2YEL005C MCM6P53091 1017 aaKnown RBP4.39□□□□□ -1.71
VAB2YEL005C DAM1P53267 343 aa4.39□□□□□ -1.71
VAB2YEL005C PBP1P53297 722 aaKnown RBP4.39□□□□□ -1.71
VAB2YEL005C SFB2P53953 876 aa4.39□□□□□ -1.71
VAB2YEL005C DUS4Q06063 367 aa4.39□□□□□ -1.71
VAB2YEL005C TMA10Q06177 86 aa4.39□□□□□ -1.71
VAB2YEL005C MPH2P0CD99 609 aa4.38□□□□□ -1.71
VAB2YEL005C HSF1P10961 833 aa4.38□□□□□ -1.71
VAB2YEL005C LST4P34239 828 aa4.38□□□□□ -1.71
VAB2YEL005C ECM21P38167 1117 aaKnown RBP4.38□□□□□ -1.71
VAB2YEL005C GDH3P39708 457 aa4.38□□□□□ -1.71
VAB2YEL005C PHO23P50947 330 aa4.38□□□□□ -1.71
VAB2YEL005C MTC3P53077 123 aa4.38□□□□□ -1.71
VAB2YEL005C DOS2P54858 310 aa4.38□□□□□ -1.71
VAB2YEL005C MSC2Q03455 724 aa4.38□□□□□ -1.71
VAB2YEL005C PLB2Q03674 706 aa4.38□□□□□ -1.71
VAB2YEL005C YGR161W-CQ3E744 92 aa4.38□□□□□ -1.71
VAB2YEL005C AFR1P33304 620 aa4.37□□□□□ -1.71
VAB2YEL005C ERT1P38140 529 aa4.37□□□□□ -1.71
VAB2YEL005C SNM1P40993 198 aa4.37□□□□□ -1.71
VAB2YEL005C RAI1P53063 387 aaKnown RBP4.37□□□□□ -1.71
VAB2YEL005C PUS2P53167 370 aa4.37□□□□□ -1.71
VAB2YEL005C YGR012WP53206 393 aa4.37□□□□□ -1.71
VAB2YEL005C UGO1Q03327 502 aa4.37□□□□□ -1.71
VAB2YEL005C SIZ1Q04195 904 aa4.37□□□□□ -1.71
VAB2YEL005C YDR514CQ04408 483 aa4.37□□□□□ -1.71
VAB2YEL005C XYL2Q07993 356 aa4.37□□□□□ -1.71
VAB2YEL005C GAL10P04397 699 aa4.36□□□□□ -1.71
VAB2YEL005C NOT3P06102 836 aaKnown RBP4.36□□□□□ -1.71
VAB2YEL005C MSH2P25847 964 aa4.36□□□□□ -1.71
VAB2YEL005C SPC42P36094 363 aa4.36□□□□□ -1.71
VAB2YEL005C SAP190P36123 1033 aa4.36□□□□□ -1.71
VAB2YEL005C CEP3P40969 608 aa4.36□□□□□ -1.71
VAB2YEL005C MNN10P50108 393 aaKnown RBP4.36□□□□□ -1.71
VAB2YEL005C BUL2Q03758 920 aaKnown RBP4.36□□□□□ -1.71
VAB2YEL005C REH1Q06709 432 aa4.36□□□□□ -1.71
VAB2YEL005C PEX6P33760 1030 aa4.35□□□□□ -1.71
VAB2YEL005C ATG19P35193 415 aa4.35□□□□□ -1.71
VAB2YEL005C EMC3P36039 253 aa4.35□□□□□ -1.71
VAB2YEL005C POA1P38218 177 aa4.35□□□□□ -1.71
VAB2YEL005C GTF1P53260 183 aaPredicted RBP4.35□□□□□ -1.71
VAB2YEL005C NOG2P53742 486 aaKnown RBP4.35□□□□□ -1.71
VAB2YEL005C KIN4Q01919 800 aa4.35□□□□□ -1.71
VAB2YEL005C ENV7Q12003 364 aa4.35□□□□□ -1.71
VAB2YEL005C RIB2Q12362 591 aaKnown RBP4.35□□□□□ -1.71
VAB2YEL005C URA1P28272 314 aaPredicted RBP4.34□□□□□ -1.71
VAB2YEL005C TYE7P33122 291 aaPredicted RBP4.34□□□□□ -1.71
VAB2YEL005C SPC29P33419 253 aa4.34□□□□□ -1.71
VAB2YEL005C YBR238CP38330 731 aaKnown RBP4.34□□□□□ -1.71
VAB2YEL005C NPP2P39997 493 aa4.34□□□□□ -1.71
VAB2YEL005C SHR5P41912 237 aa4.34□□□□□ -1.71
VAB2YEL005C NTG2Q08214 380 aa4.34□□□□□ -1.71
VAB2YEL005C NOP14Q99207 810 aaKnown RBP4.34□□□□□ -1.71
VAB2YEL005C VBA3P25594 458 aa4.33□□□□□ -1.72
VAB2YEL005C CDC20P26309 610 aa4.33□□□□□ -1.72
VAB2YEL005C MND2P40577 368 aa4.33□□□□□ -1.72
VAB2YEL005C GYP8P43570 497 aa4.33□□□□□ -1.72
VAB2YEL005C YKE2P52553 114 aa4.33□□□□□ -1.72
VAB2YEL005C YGR283CP53336 341 aaPredicted RBP4.33□□□□□ -1.72
VAB2YEL005C RXT3Q07458 294 aa4.33□□□□□ -1.72
VAB2YEL005C MET7Q08645 548 aa4.33□□□□□ -1.72
VAB2YEL005C PRC1P00729 532 aa4.32□□□□□ -1.72
VAB2YEL005C SPE1P08432 466 aa4.32□□□□□ -1.72
VAB2YEL005C DAL7P21826 554 aa4.32□□□□□ -1.72
VAB2YEL005C SRM1P21827 482 aa4.32□□□□□ -1.72
VAB2YEL005C STE11P23561 717 aa4.32□□□□□ -1.72
VAB2YEL005C CYS3P31373 394 aaKnown RBP4.32□□□□□ -1.72
VAB2YEL005C STE13P33894 931 aa4.32□□□□□ -1.72
VAB2YEL005C STO1P34160 861 aaKnown RBP4.32□□□□□ -1.72
VAB2YEL005C RPN10P38886 268 aaKnown RBP4.32□□□□□ -1.72
VAB2YEL005C ZDS1P50111 915 aaKnown RBP4.32□□□□□ -1.72
VAB2YEL005C TFB2Q02939 513 aa4.32□□□□□ -1.72
VAB2YEL005C CDA1Q06702 301 aa4.32□□□□□ -1.72
VAB2YEL005C MDM12Q92328 271 aa4.32□□□□□ -1.72
VAB2YEL005C YIL108WP40483 696 aaKnown RBP4.31□□□□□ -1.72
VAB2YEL005C ALY2P47029 1046 aa4.31□□□□□ -1.72
VAB2YEL005C HLJ1P48353 224 aa4.31□□□□□ -1.72
VAB2YEL005C TAD1P53065 400 aa4.31□□□□□ -1.72
VAB2YEL005C YKR011CQ02209 353 aa4.31□□□□□ -1.72
VAB2YEL005C ATP25Q03153 612 aa4.31□□□□□ -1.72
VAB2YEL005C RSC3Q06639 885 aa4.31□□□□□ -1.72
VAB2YEL005C GPB1Q08886 897 aa4.31□□□□□ -1.72
VAB2YEL005C ADR1P07248 1323 aa4.3□□□□□ -1.72
VAB2YEL005C DIF1O13577 133 aa4.3□□□□□ -1.72
VAB2YEL005C PER1P25625 357 aa4.3□□□□□ -1.72
VAB2YEL005C DOT6P40059 670 aaKnown RBP4.3□□□□□ -1.72
VAB2YEL005C YJR142WP47173 342 aa4.3□□□□□ -1.72
VAB2YEL005C GCV2P49095 1034 aa4.3□□□□□ -1.72
VAB2YEL005C MAL11P53048 616 aa4.3□□□□□ -1.72
VAB2YEL005C ACK1Q07622 623 aaPredicted RBP4.3□□□□□ -1.72
VAB2YEL005C TPO1Q07824 586 aa4.3□□□□□ -1.72
VAB2YEL005C CDC9P04819 755 aa4.29□□□□□ -1.72
VAB2YEL005C SRD1P09007 221 aa4.29□□□□□ -1.72
VAB2YEL005C MEF1P25039 761 aa4.29□□□□□ -1.72
VAB2YEL005C SED4P25365 1065 aa4.29□□□□□ -1.72
VAB2YEL005C RPD3P32561 433 aa4.29□□□□□ -1.72
VAB2YEL005C SET5P38890 526 aaKnown RBP4.29□□□□□ -1.72
VAB2YEL005C RLP7P40693 322 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms