RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W PPM2Q08282 695 aa3.22□□□□□ -1.89
VPS52YDR484W NOT3P06102 836 aaKnown RBP3.21□□□□□ -1.9
VPS52YDR484W BET3P36149 193 aa3.21□□□□□ -1.9
VPS52YDR484W CHS7P38843 316 aa3.21□□□□□ -1.9
VPS52YDR484W MET12P46151 657 aa3.21□□□□□ -1.9
VPS52YDR484W NIT3P49954 291 aa3.21□□□□□ -1.9
VPS52YDR484W TMA10Q06177 86 aa3.21□□□□□ -1.9
VPS52YDR484W ACK1Q07622 623 aaPredicted RBP3.21□□□□□ -1.9
VPS52YDR484W RTA1P53047 317 aa3.21□□□□□ -1.9
VPS52YDR484W VPS62P53285 467 aa3.21□□□□□ -1.9
VPS52YDR484W ADY3Q07732 790 aa3.21□□□□□ -1.9
VPS52YDR484W NOP12Q08208 459 aaKnown RBP3.21□□□□□ -1.9
VPS52YDR484W HMI1Q12039 706 aa3.21□□□□□ -1.9
VPS52YDR484W YLR125WQ12138 136 aa3.21□□□□□ -1.9
VPS52YDR484W SPE1P08432 466 aa3.2□□□□□ -1.9
VPS52YDR484W MPH2P0CD99 609 aa3.2□□□□□ -1.9
VPS52YDR484W EMC1P25574 760 aa3.2□□□□□ -1.9
VPS52YDR484W CDC20P26309 610 aa3.2□□□□□ -1.9
VPS52YDR484W ERT1P38140 529 aa3.2□□□□□ -1.9
VPS52YDR484W NUP82P40368 713 aa3.2□□□□□ -1.9
VPS52YDR484W ALG2P43636 503 aa3.2□□□□□ -1.9
VPS52YDR484W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
VPS52YDR484W GCV2P49095 1034 aa3.2□□□□□ -1.9
VPS52YDR484W PHO23P50947 330 aa3.2□□□□□ -1.9
VPS52YDR484W DAM1P53267 343 aa3.2□□□□□ -1.9
VPS52YDR484W HIS5P07172 385 aa3.19□□□□□ -1.9
VPS52YDR484W CDC6P09119 513 aa3.19□□□□□ -1.9
VPS52YDR484W PHO8P11491 566 aa3.19□□□□□ -1.9
VPS52YDR484W STE11P23561 717 aa3.19□□□□□ -1.9
VPS52YDR484W TIM23P32897 222 aa3.19□□□□□ -1.9
VPS52YDR484W STE13P33894 931 aa3.19□□□□□ -1.9
VPS52YDR484W ENV7Q12003 364 aa3.19□□□□□ -1.9
VPS52YDR484W CIT2P08679 460 aa3.19□□□□□ -1.9
VPS52YDR484W TYE7P33122 291 aaPredicted RBP3.19□□□□□ -1.9
VPS52YDR484W LST4P34239 828 aa3.19□□□□□ -1.9
VPS52YDR484W EMC3P36039 253 aa3.19□□□□□ -1.9
VPS52YDR484W HSV2P50079 448 aaPredicted RBP3.19□□□□□ -1.9
VPS52YDR484W ORC1P54784 914 aaPredicted RBP3.19□□□□□ -1.9
VPS52YDR484W RPS9AO13516 197 aaKnown RBP3.18□□□□□ -1.9
VPS52YDR484W PHR1P05066 565 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
VPS52YDR484W ERR1P0CX10 437 aa3.18□□□□□ -1.9
VPS52YDR484W ERR2P0CX11 437 aa3.18□□□□□ -1.9
VPS52YDR484W GDH3P39708 457 aa3.18□□□□□ -1.9
VPS52YDR484W URM1P40554 99 aaPredicted RBP3.18□□□□□ -1.9
VPS52YDR484W CEP3P40969 608 aa3.18□□□□□ -1.9
VPS52YDR484W CHA4P43634 648 aa3.18□□□□□ -1.9
VPS52YDR484W YGR283CP53336 341 aaPredicted RBP3.18□□□□□ -1.9
VPS52YDR484W NOG2P53742 486 aaKnown RBP3.18□□□□□ -1.9
VPS52YDR484W YAP6Q03935 383 aa3.18□□□□□ -1.9
VPS52YDR484W URA1P28272 314 aaPredicted RBP3.17□□□□□ -1.9
VPS52YDR484W YKR011CQ02209 353 aa3.17□□□□□ -1.9
VPS52YDR484W YDR514CQ04408 483 aa3.17□□□□□ -1.9
VPS52YDR484W POB3Q04636 552 aaKnown RBP3.17□□□□□ -1.9
VPS52YDR484W YLR224WQ05947 369 aa3.17□□□□□ -1.9
VPS52YDR484W REH1Q06709 432 aa3.17□□□□□ -1.9
VPS52YDR484W MET6P05694 767 aaKnown RBP3.17□□□□□ -1.9
VPS52YDR484W THI4P32318 326 aa3.17□□□□□ -1.9
VPS52YDR484W PPG1P32838 368 aa3.17□□□□□ -1.9
VPS52YDR484W SPC29P33419 253 aa3.17□□□□□ -1.9
VPS52YDR484W YIL108WP40483 696 aaKnown RBP3.17□□□□□ -1.9
VPS52YDR484W ATP25Q03153 612 aa3.17□□□□□ -1.9
VPS52YDR484W SED4P25365 1065 aa3.16□□□□□ -1.9
VPS52YDR484W RRP14P36080 434 aaKnown RBP3.16□□□□□ -1.9
VPS52YDR484W NMD2P38798 1089 aaKnown RBP3.16□□□□□ -1.9
VPS52YDR484W PLB1P39105 664 aa3.16□□□□□ -1.9
VPS52YDR484W GYP8P43570 497 aa3.16□□□□□ -1.9
VPS52YDR484W PUS2P53167 370 aa3.16□□□□□ -1.9
VPS52YDR484W RNH70P53331 553 aa3.16□□□□□ -1.9
VPS52YDR484W SSL1Q04673 461 aaPredicted RBP3.16□□□□□ -1.9
VPS52YDR484W AIM44Q99299 758 aa3.16□□□□□ -1.9
VPS52YDR484W DAL7P21826 554 aa3.15□□□□□ -1.9
VPS52YDR484W GSY1P23337 708 aa3.15□□□□□ -1.9
VPS52YDR484W CYS3P31373 394 aaKnown RBP3.15□□□□□ -1.9
VPS52YDR484W RPD3P32561 433 aa3.15□□□□□ -1.9
VPS52YDR484W UBA2P52488 636 aa3.15□□□□□ -1.9
VPS52YDR484W NCS6P53088 359 aa3.15□□□□□ -1.9
VPS52YDR484W HDA1P53973 706 aa3.15□□□□□ -1.9
VPS52YDR484W KIN4Q01919 800 aa3.15□□□□□ -1.9
VPS52YDR484W WHI4Q07655 649 aaKnown RBP3.15□□□□□ -1.9
VPS52YDR484W MET7Q08645 548 aa3.15□□□□□ -1.9
VPS52YDR484W UPC2Q12151 913 aa3.15□□□□□ -1.9
VPS52YDR484W PMA1P05030 918 aaKnown RBP3.15□□□□□ -1.91
VPS52YDR484W FBP1P09201 348 aa3.15□□□□□ -1.91
VPS52YDR484W MSH2P25847 964 aa3.15□□□□□ -1.91
VPS52YDR484W SAP190P36123 1033 aa3.15□□□□□ -1.91
VPS52YDR484W TAD1P53065 400 aa3.15□□□□□ -1.91
VPS52YDR484W UGO1Q03327 502 aa3.15□□□□□ -1.91
VPS52YDR484W NPC2Q12408 173 aa3.15□□□□□ -1.91
VPS52YDR484W MDM12Q92328 271 aa3.15□□□□□ -1.91
VPS52YDR484W OAR1P35731 278 aa3.14□□□□□ -1.91
VPS52YDR484W SDP1P40479 209 aa3.14□□□□□ -1.91
VPS52YDR484W ZDS1P50111 915 aaKnown RBP3.14□□□□□ -1.91
VPS52YDR484W MAL11P53048 616 aa3.14□□□□□ -1.91
VPS52YDR484W GUP2Q08929 609 aa3.14□□□□□ -1.91
VPS52YDR484W KCS1Q12494 1050 aa3.14□□□□□ -1.91
VPS52YDR484W PRC1P00729 532 aa3.13□□□□□ -1.91
VPS52YDR484W PEX6P33760 1030 aa3.13□□□□□ -1.91
VPS52YDR484W DEF1P35732 738 aaKnown RBP3.13□□□□□ -1.91
VPS52YDR484W CTF8P38877 133 aa3.13□□□□□ -1.91
VPS52YDR484W SET5P38890 526 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms