RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	TYE7	P33122	291 aa	Predicted RBP	6.15	□□□□□ -1.42
NSE3	YDR288W	STE13	P33894	931 aa		6.15	□□□□□ -1.42
NSE3	YDR288W	LAM1	P38851	1228 aa		6.15	□□□□□ -1.42
NSE3	YDR288W	MND2	P40577	368 aa		6.15	□□□□□ -1.42
NSE3	YDR288W	YJR142W	P47173	342 aa		6.15	□□□□□ -1.42
NSE3	YDR288W	CDA1	Q06702	301 aa		6.15	□□□□□ -1.42
NSE3	YDR288W	RPP2A	P05319	106 aa	Known RBP	6.14	□□□□□ -1.43
NSE3	YDR288W	MEF1	P25039	761 aa		6.14	□□□□□ -1.43
NSE3	YDR288W	CYS3	P31373	394 aa	Known RBP	6.14	□□□□□ -1.43
NSE3	YDR288W	STO1	P34160	861 aa	Known RBP	6.14	□□□□□ -1.43
NSE3	YDR288W	HLJ1	P48353	224 aa		6.14	□□□□□ -1.43
NSE3	YDR288W	TAD1	P53065	400 aa		6.14	□□□□□ -1.43
NSE3	YDR288W	RSC3	Q06639	885 aa		6.14	□□□□□ -1.43
NSE3	YDR288W	CDC9	P04819	755 aa		6.13	□□□□□ -1.43
NSE3	YDR288W	RPL8A	P17076	256 aa	Known RBP	6.13	□□□□□ -1.43
NSE3	YDR288W	ATG19	P35193	415 aa		6.13	□□□□□ -1.43
NSE3	YDR288W	YIL108W	P40483	696 aa	Known RBP	6.13	□□□□□ -1.43
NSE3	YDR288W	SHR5	P41912	237 aa		6.13	□□□□□ -1.43
NSE3	YDR288W	YKR011C	Q02209	353 aa		6.13	□□□□□ -1.43
NSE3	YDR288W	PLB2	Q03674	706 aa		6.13	□□□□□ -1.43
NSE3	YDR288W	PRC1	P00729	532 aa		6.12	□□□□□ -1.43
NSE3	YDR288W	SPE1	P08432	466 aa		6.12	□□□□□ -1.43
NSE3	YDR288W	RAD18	P10862	487 aa		6.12	□□□□□ -1.43
NSE3	YDR288W	RPD3	P32561	433 aa		6.12	□□□□□ -1.43
NSE3	YDR288W	RPN10	P38886	268 aa	Known RBP	6.12	□□□□□ -1.43
NSE3	YDR288W	MEF2	P39677	819 aa		6.12	□□□□□ -1.43
NSE3	YDR288W	ALY2	P47029	1046 aa		6.12	□□□□□ -1.43
NSE3	YDR288W	GCV2	P49095	1034 aa		6.12	□□□□□ -1.43
NSE3	YDR288W	ZDS1	P50111	915 aa	Known RBP	6.12	□□□□□ -1.43
NSE3	YDR288W	YNL193W	P53870	558 aa		6.12	□□□□□ -1.43
NSE3	YDR288W	RXT3	Q07458	294 aa		6.12	□□□□□ -1.43
NSE3	YDR288W	TPO1	Q07824	586 aa		6.12	□□□□□ -1.43
NSE3	YDR288W	SRD1	P09007	221 aa		6.11	□□□□□ -1.43
NSE3	YDR288W	GAS1	P22146	559 aa	Known RBP	6.11	□□□□□ -1.43
NSE3	YDR288W	MTC2	P34246	357 aa		6.11	□□□□□ -1.43
NSE3	YDR288W	CRP1	P38845	465 aa	Known RBP	6.11	□□□□□ -1.43
NSE3	YDR288W	GPB1	Q08886	897 aa		6.11	□□□□□ -1.43
NSE3	YDR288W	DIF1	O13577	133 aa		6.1	□□□□□ -1.43
NSE3	YDR288W	SEG2	P34250	1132 aa		6.1	□□□□□ -1.43
NSE3	YDR288W	RLP7	P40693	322 aa	Known RBP	6.1	□□□□□ -1.43
NSE3	YDR288W	CAF16	P43569	289 aa		6.1	□□□□□ -1.43
NSE3	YDR288W	SPT20	P50875	604 aa		6.1	□□□□□ -1.43
NSE3	YDR288W	PRP43	P53131	767 aa	Known RBP	6.1	□□□□□ -1.43
NSE3	YDR288W	SDA1	P53313	767 aa	Known RBP	6.1	□□□□□ -1.43
NSE3	YDR288W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
NSE3	YDR288W	HDA1	P53973	706 aa		6.1	□□□□□ -1.43
NSE3	YDR288W	LRS4	Q04087	347 aa	Known RBP	6.1	□□□□□ -1.43
NSE3	YDR288W	SSL1	Q04673	461 aa	Predicted RBP	6.1	□□□□□ -1.43
NSE3	YDR288W	YCL002C	P25565	263 aa		6.09	□□□□□ -1.43
NSE3	YDR288W	YGL081W	P53156	320 aa		6.09	□□□□□ -1.43
NSE3	YDR288W	GCN5	Q03330	439 aa		6.09	□□□□□ -1.43
NSE3	YDR288W	YOR022C	Q12204	715 aa		6.09	□□□□□ -1.43
NSE3	YDR288W	RPS13	P05756	151 aa	Known RBP	6.08	□□□□□ -1.44
NSE3	YDR288W	EMC1	P25574	760 aa		6.08	□□□□□ -1.44
NSE3	YDR288W	SET5	P38890	526 aa	Known RBP	6.08	□□□□□ -1.44
NSE3	YDR288W	SNP1	Q00916	300 aa	Predicted RBP	6.08	□□□□□ -1.44
NSE3	YDR288W	CRR1	Q05790	422 aa		6.08	□□□□□ -1.44
NSE3	YDR288W	TSR4	P25040	408 aa		6.07	□□□□□ -1.44
NSE3	YDR288W	SED4	P25365	1065 aa		6.07	□□□□□ -1.44
NSE3	YDR288W	MCD4	P36051	919 aa		6.07	□□□□□ -1.44
NSE3	YDR288W	AIM3	P38266	947 aa	Known RBP	6.07	□□□□□ -1.44
NSE3	YDR288W	DOT6	P40059	670 aa	Known RBP	6.07	□□□□□ -1.44
NSE3	YDR288W	MET12	P46151	657 aa		6.07	□□□□□ -1.44
NSE3	YDR288W	TY4A-J	P47023	414 aa		6.07	□□□□□ -1.44
NSE3	YDR288W	ADY3	Q07732	790 aa		6.07	□□□□□ -1.44
NSE3	YDR288W	GLT1	Q12680	2145 aa	Known RBP	6.07	□□□□□ -1.44
NSE3	YDR288W	HIS5	P07172	385 aa		6.06	□□□□□ -1.44
NSE3	YDR288W	YEL1	P34225	687 aa		6.06	□□□□□ -1.44
NSE3	YDR288W	YNR029C	P53729	429 aa	Known RBP	6.06	□□□□□ -1.44
NSE3	YDR288W	ACK1	Q07622	623 aa	Predicted RBP	6.06	□□□□□ -1.44
NSE3	YDR288W	WHI4	Q07655	649 aa	Known RBP	6.06	□□□□□ -1.44
NSE3	YDR288W	HOG1	P32485	435 aa		6.05	□□□□□ -1.44
NSE3	YDR288W	YFL052W	P43551	465 aa		6.05	□□□□□ -1.44
NSE3	YDR288W	PMT3	P47190	753 aa		6.05	□□□□□ -1.44
NSE3	YDR288W	NHX1	Q04121	633 aa		6.05	□□□□□ -1.44
NSE3	YDR288W	COG8	Q04632	607 aa		6.05	□□□□□ -1.44
NSE3	YDR288W	YPL277C	Q08989	487 aa		6.05	□□□□□ -1.44
NSE3	YDR288W	HMI1	Q12039	706 aa		6.05	□□□□□ -1.44
NSE3	YDR288W	HAL9	Q12180	1030 aa		6.05	□□□□□ -1.44
NSE3	YDR288W	NUP145	P49687	1317 aa		6.04	□□□□□ -1.44
NSE3	YDR288W	SOD2	P00447	233 aa		6.04	□□□□□ -1.44
NSE3	YDR288W	SFL1	P20134	766 aa		6.04	□□□□□ -1.44
NSE3	YDR288W	NIT1	P40447	199 aa		6.04	□□□□□ -1.44
NSE3	YDR288W	AVT1	P47082	602 aa		6.04	□□□□□ -1.44
NSE3	YDR288W	DUS1	P53759	423 aa	Known RBP	6.04	□□□□□ -1.44
NSE3	YDR288W	YAP6	Q03935	383 aa		6.04	□□□□□ -1.44
NSE3	YDR288W	DUS4	Q06063	367 aa		6.04	□□□□□ -1.44
NSE3	YDR288W	NOP12	Q08208	459 aa	Known RBP	6.04	□□□□□ -1.44
NSE3	YDR288W	YBR182C-A	Q8TGU6	64 aa		6.04	□□□□□ -1.44
NSE3	YDR288W	PCL2	P25693	308 aa		6.03	□□□□□ -1.44
NSE3	YDR288W	HXT16	P47185	567 aa		6.03	□□□□□ -1.44
NSE3	YDR288W	NPY1	P53164	384 aa		6.03	□□□□□ -1.44
NSE3	YDR288W	RIM8	P53179	542 aa		6.03	□□□□□ -1.44
NSE3	YDR288W	VPS62	P53285	467 aa		6.03	□□□□□ -1.44
NSE3	YDR288W	YDR132C	Q03900	495 aa		6.03	□□□□□ -1.44
NSE3	YDR288W	YLR001C	Q07895	862 aa		6.03	□□□□□ -1.44
NSE3	YDR288W	THI73	Q07904	523 aa		6.03	□□□□□ -1.44
NSE3	YDR288W	GIN4	Q12263	1142 aa		6.03	□□□□□ -1.44
NSE3	YDR288W	TOD6	P34219	525 aa		6.02	□□□□□ -1.45
NSE3	YDR288W	HSL7	P38274	827 aa		6.02	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 98.4 ms