RNA–Protein interactions for RNA: YDR224C

HTB1, Transcript of Histone H2B, yeast

Gene HTB1, Length 396 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTB1	YDR224C	HUL4	P40985	892 aa		5.18	□□□□□ -1.58
HTB1	YDR224C	TIM44	Q01852	431 aa		5.18	□□□□□ -1.58
HTB1	YDR224C	OMS1	Q06668	471 aa		5.18	□□□□□ -1.58
HTB1	YDR224C	BDF2	Q07442	638 aa		5.18	□□□□□ -1.58
HTB1	YDR224C	FLC1	Q08967	793 aa		5.18	□□□□□ -1.58
HTB1	YDR224C	ERG4	P25340	473 aa		5.17	□□□□□ -1.58
HTB1	YDR224C	RPC82	P32349	654 aa		5.17	□□□□□ -1.58
HTB1	YDR224C	HBS1	P32769	611 aa	Known RBP	5.17	□□□□□ -1.58
HTB1	YDR224C	YBR284W	P38150	797 aa		5.17	□□□□□ -1.58
HTB1	YDR224C	SIT1	P39980	628 aa		5.17	□□□□□ -1.58
HTB1	YDR224C	GYP7	P48365	746 aa		5.17	□□□□□ -1.58
HTB1	YDR224C	TMN2	Q04562	672 aa		5.17	□□□□□ -1.58
HTB1	YDR224C	YPR196W	Q06595	470 aa		5.17	□□□□□ -1.58
HTB1	YDR224C	SED4	P25365	1065 aa		5.16	□□□□□ -1.58
HTB1	YDR224C	YER158C	P40095	573 aa		5.16	□□□□□ -1.58
HTB1	YDR224C	BUL1	P48524	976 aa		5.16	□□□□□ -1.58
HTB1	YDR224C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	RIP-Chip
HTB1	YDR224C	LCD1	Q04377	747 aa		5.16	□□□□□ -1.58
HTB1	YDR224C	ACF2	Q12168	779 aa		5.16	□□□□□ -1.58
HTB1	YDR224C	YPR071W	Q12346	211 aa		5.16	□□□□□ -1.58
HTB1	YDR224C	HBN1	Q96VH4	193 aa		5.16	□□□□□ -1.58
HTB1	YDR224C	TRP4	P07285	380 aa	Predicted RBP	5.15	□□□□□ -1.59
HTB1	YDR224C	YKL091C	P33324	310 aa	Known RBP	5.15	□□□□□ -1.59
HTB1	YDR224C	YKR078W	P36158	585 aa	Known RBP	5.15	□□□□□ -1.59
HTB1	YDR224C	YHR020W	P38708	688 aa	Known RBP	5.15	□□□□□ -1.59
HTB1	YDR224C	GGA2	P38817	585 aa	Known RBP	5.15	□□□□□ -1.59
HTB1	YDR224C	RSP5	P39940	809 aa	Known RBP	5.15	□□□□□ -1.59
HTB1	YDR224C	STB4	P50104	949 aa		5.15	□□□□□ -1.59
HTB1	YDR224C	SFB2	P53953	876 aa		5.15	□□□□□ -1.59
HTB1	YDR224C	RNT1	Q02555	471 aa		5.15	□□□□□ -1.59
HTB1	YDR224C	YMR206W	Q03695	313 aa		5.15	□□□□□ -1.59
HTB1	YDR224C	YDL124W	Q07551	312 aa	Known RBP	5.15	□□□□□ -1.59
HTB1	YDR224C	UPC2	Q12151	913 aa		5.15	□□□□□ -1.59
HTB1	YDR224C	NPP1	P25353	742 aa		5.14	□□□□□ -1.59
HTB1	YDR224C	CDC48	P25694	835 aa	Known RBP	5.14	□□□□□ -1.59
HTB1	YDR224C	TSL1	P38427	1098 aa	Known RBP	5.14	□□□□□ -1.59
HTB1	YDR224C	QRI1	P43123	477 aa	Known RBP	5.14	□□□□□ -1.59
HTB1	YDR224C	CCM1	P48237	864 aa	Predicted RBP	5.14	□□□□□ -1.59
HTB1	YDR224C	REC104	P33323	182 aa		5.13	□□□□□ -1.59
HTB1	YDR224C	NPP2	P39997	493 aa		5.13	□□□□□ -1.59
HTB1	YDR224C	ATF1	P40353	525 aa		5.13	□□□□□ -1.59
HTB1	YDR224C	TAF8	Q03750	510 aa		5.13	□□□□□ -1.59
HTB1	YDR224C	MSD1	P15179	658 aa	Known RBP	5.12	□□□□□ -1.59
HTB1	YDR224C	GAL11	P19659	1081 aa		5.12	□□□□□ -1.59
HTB1	YDR224C	AFR1	P33304	620 aa		5.12	□□□□□ -1.59
HTB1	YDR224C	RAI1	P53063	387 aa	Known RBP	5.12	□□□□□ -1.59
HTB1	YDR224C	CAN1	P04817	590 aa		5.11	□□□□□ -1.59
HTB1	YDR224C	TOM70	P07213	617 aa	Known RBP	5.11	□□□□□ -1.59
HTB1	YDR224C	PET10	P36139	283 aa		5.11	□□□□□ -1.59
HTB1	YDR224C	CHZ1	P40019	153 aa	Predicted RBP	5.11	□□□□□ -1.59
HTB1	YDR224C	TOK1	P40310	691 aa		5.11	□□□□□ -1.59
HTB1	YDR224C	IRC10	Q08118	586 aa		5.11	□□□□□ -1.59
HTB1	YDR224C	NOT3	P06102	836 aa	Known RBP	5.1	□□□□□ -1.59
HTB1	YDR224C	TOP3	P13099	656 aa		5.1	□□□□□ -1.59
HTB1	YDR224C	ERT1	P38140	529 aa		5.1	□□□□□ -1.59
HTB1	YDR224C	RPN4	Q03465	531 aa		5.1	□□□□□ -1.59
HTB1	YDR224C	PPR1	P07272	904 aa	Predicted RBP	5.09	□□□□□ -1.59
HTB1	YDR224C	ALG7	P07286	448 aa		5.09	□□□□□ -1.59
HTB1	YDR224C	RFA1	P22336	621 aa	Known RBP	5.09	□□□□□ -1.59
HTB1	YDR224C	YBR238C	P38330	731 aa	Known RBP	5.09	□□□□□ -1.59
HTB1	YDR224C	UBP6	P43593	499 aa	Known RBP	5.09	□□□□□ -1.59
HTB1	YDR224C	YKE2	P52553	114 aa		5.09	□□□□□ -1.59
HTB1	YDR224C	LGE1	Q02796	332 aa	Known RBP	5.09	□□□□□ -1.59
HTB1	YDR224C	VPS30	Q02948	557 aa		5.09	□□□□□ -1.59
HTB1	YDR224C	BUL2	Q03758	920 aa	Known RBP	5.09	□□□□□ -1.59
HTB1	YDR224C	YTA7	P40340	1379 aa		5.08	□□□□□ -1.6
HTB1	YDR224C	STE14	P32584	239 aa		5.08	□□□□□ -1.6
HTB1	YDR224C	CUE2	P36075	443 aa	Known RBP	5.08	□□□□□ -1.6
HTB1	YDR224C	BET3	P36149	193 aa		5.08	□□□□□ -1.6
HTB1	YDR224C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
HTB1	YDR224C	OSW7	P43611	510 aa		5.08	□□□□□ -1.6
HTB1	YDR224C	RTA1	P53047	317 aa		5.07	□□□□□ -1.6
HTB1	YDR224C	PEX19	Q07418	342 aa		5.07	□□□□□ -1.6
HTB1	YDR224C	STE13	P33894	931 aa		5.06	□□□□□ -1.6
HTB1	YDR224C	MTH1	P35198	433 aa		5.06	□□□□□ -1.6
HTB1	YDR224C	SPC42	P36094	363 aa		5.06	□□□□□ -1.6
HTB1	YDR224C	BUD6	P41697	788 aa		5.06	□□□□□ -1.6
HTB1	YDR224C	NIT3	P49954	291 aa		5.06	□□□□□ -1.6
HTB1	YDR224C	GND2	P53319	492 aa		5.06	□□□□□ -1.6
HTB1	YDR224C	MUK1	Q02866	612 aa		5.06	□□□□□ -1.6
HTB1	YDR224C	CEP3	P40969	608 aa		5.05	□□□□□ -1.6
HTB1	YDR224C	FPR4	Q06205	392 aa	Predicted RBP	5.05	□□□□□ -1.6
HTB1	YDR224C	HBT1	Q07653	1046 aa	Known RBP	5.05	□□□□□ -1.6
HTB1	YDR224C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
HTB1	YDR224C	MPH2	P0CD99	609 aa		5.04	□□□□□ -1.6
HTB1	YDR224C	ERR1	P0CX10	437 aa		5.04	□□□□□ -1.6
HTB1	YDR224C	ERR2	P0CX11	437 aa		5.04	□□□□□ -1.6
HTB1	YDR224C	TIM23	P32897	222 aa		5.04	□□□□□ -1.6
HTB1	YDR224C	NUP82	P40368	713 aa		5.04	□□□□□ -1.6
HTB1	YDR224C	SNM1	P40993	198 aa		5.04	□□□□□ -1.6
HTB1	YDR224C	ALG2	P43636	503 aa		5.04	□□□□□ -1.6
HTB1	YDR224C	ENV7	Q12003	364 aa		5.04	□□□□□ -1.6
HTB1	YDR224C	RPS9A	O13516	197 aa	Known RBP	5.03	□□□□□ -1.6
HTB1	YDR224C	MET3	P08536	511 aa		5.03	□□□□□ -1.6
HTB1	YDR224C	CIT2	P08679	460 aa		5.03	□□□□□ -1.6
HTB1	YDR224C	YIL108W	P40483	696 aa	Known RBP	5.03	□□□□□ -1.6
HTB1	YDR224C	DAM1	P53267	343 aa		5.03	□□□□□ -1.6
HTB1	YDR224C	ERG5	P54781	538 aa		5.03	□□□□□ -1.6
HTB1	YDR224C	SLU7	Q02775	382 aa	Known RBP	5.03	□□□□□ -1.6
HTB1	YDR224C	SSL1	Q04673	461 aa	Predicted RBP	5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms