RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	YRO2	P38079	344 aa		3.96	□□□□□ -1.78
SWF1	YDR126W	CTF8	P38877	133 aa		3.96	□□□□□ -1.78
SWF1	YDR126W	IRR1	P40541	1150 aa		3.96	□□□□□ -1.78
SWF1	YDR126W	CCM1	P48237	864 aa	Predicted RBP	3.96	□□□□□ -1.78
SWF1	YDR126W	JIP5	Q06214	492 aa	Predicted RBP	3.96	□□□□□ -1.78
SWF1	YDR126W	BUL2	Q03758	920 aa	Known RBP	3.95	□□□□□ -1.78
SWF1	YDR126W	TRM11	Q12463	433 aa		3.95	□□□□□ -1.78
SWF1	YDR126W	MET3	P08536	511 aa		3.94	□□□□□ -1.78
SWF1	YDR126W	TUB3	P09734	445 aa	Known RBP	3.94	□□□□□ -1.78
SWF1	YDR126W	PRP9	P19736	530 aa	Known RBP	3.94	□□□□□ -1.78
SWF1	YDR126W	RFA1	P22336	621 aa	Known RBP	3.94	□□□□□ -1.78
SWF1	YDR126W	TYE7	P33122	291 aa	Predicted RBP	3.94	□□□□□ -1.78
SWF1	YDR126W	ATF1	P40353	525 aa		3.94	□□□□□ -1.78
SWF1	YDR126W	YIL108W	P40483	696 aa	Known RBP	3.94	□□□□□ -1.78
SWF1	YDR126W	YKR011C	Q02209	353 aa		3.94	□□□□□ -1.78
SWF1	YDR126W	MUK1	Q02866	612 aa		3.94	□□□□□ -1.78
SWF1	YDR126W	YMR206W	Q03695	313 aa		3.94	□□□□□ -1.78
SWF1	YDR126W	LCD1	Q04377	747 aa		3.94	□□□□□ -1.78
SWF1	YDR126W	SWM1	Q12379	170 aa		3.94	□□□□□ -1.78
SWF1	YDR126W	RPD3	P32561	433 aa		3.93	□□□□□ -1.78
SWF1	YDR126W	HBS1	P32769	611 aa	Known RBP	3.93	□□□□□ -1.78
SWF1	YDR126W	MTH1	P35198	433 aa		3.93	□□□□□ -1.78
SWF1	YDR126W	SPF1	P39986	1215 aa	Known RBP	3.93	□□□□□ -1.78
SWF1	YDR126W	DLT1	Q04216	342 aa		3.93	□□□□□ -1.78
SWF1	YDR126W	FRE5	Q08908	694 aa		3.93	□□□□□ -1.78
SWF1	YDR126W	STE5	P32917	917 aa		3.92	□□□□□ -1.78
SWF1	YDR126W	TOK1	P40310	691 aa		3.92	□□□□□ -1.78
SWF1	YDR126W	ELO3	P40319	345 aa		3.92	□□□□□ -1.78
SWF1	YDR126W	DAS1	P47005	663 aa		3.92	□□□□□ -1.78
SWF1	YDR126W	HDA1	P53973	706 aa		3.92	□□□□□ -1.78
SWF1	YDR126W	HBT1	Q07653	1046 aa	Known RBP	3.92	□□□□□ -1.78
SWF1	YDR126W	URA1	P28272	314 aa	Predicted RBP	3.91	□□□□□ -1.78
SWF1	YDR126W	REC104	P33323	182 aa		3.91	□□□□□ -1.78
SWF1	YDR126W	SPC42	P36094	363 aa		3.91	□□□□□ -1.78
SWF1	YDR126W	ERT1	P38140	529 aa		3.91	□□□□□ -1.78
SWF1	YDR126W	YHR078W	P38799	552 aa		3.91	□□□□□ -1.78
SWF1	YDR126W	SDS3	P40505	327 aa		3.91	□□□□□ -1.78
SWF1	YDR126W	GND2	P53319	492 aa		3.91	□□□□□ -1.78
SWF1	YDR126W	TDA5	Q06417	326 aa	Known RBP	3.91	□□□□□ -1.78
SWF1	YDR126W	CAF20	P12962	161 aa	Known RBP	3.9	□□□□□ -1.79
SWF1	YDR126W	CDC11	P32458	415 aa		3.9	□□□□□ -1.79
SWF1	YDR126W	YHL017W	P38745	532 aa		3.9	□□□□□ -1.79
SWF1	YDR126W	VAC8	P39968	578 aa		3.9	□□□□□ -1.79
SWF1	YDR126W	CEP3	P40969	608 aa		3.9	□□□□□ -1.79
SWF1	YDR126W	PFD1	P46988	109 aa		3.9	□□□□□ -1.79
SWF1	YDR126W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
SWF1	YDR126W	ALD6	P54115	500 aa	Known RBP	3.9	□□□□□ -1.79
SWF1	YDR126W	ADY4	Q05955	493 aa		3.9	□□□□□ -1.79
SWF1	YDR126W	CUE2	P36075	443 aa	Known RBP	3.89	□□□□□ -1.79
SWF1	YDR126W	PPS1	P38148	807 aa		3.89	□□□□□ -1.79
SWF1	YDR126W	YBR184W	P38299	523 aa		3.89	□□□□□ -1.79
SWF1	YDR126W	RPP1	P38786	293 aa		3.89	□□□□□ -1.79
SWF1	YDR126W	BDF2	Q07442	638 aa		3.89	□□□□□ -1.79
SWF1	YDR126W	RPS9A	O13516	197 aa	Known RBP	3.88	□□□□□ -1.79
SWF1	YDR126W	MPH2	P0CD99	609 aa		3.88	□□□□□ -1.79
SWF1	YDR126W	PRP4	P20053	465 aa	Known RBP	3.88	□□□□□ -1.79
SWF1	YDR126W	UTP8	P53276	713 aa	Known RBP	3.88	□□□□□ -1.79
SWF1	YDR126W	ASI2	P53895	289 aa		3.88	□□□□□ -1.79
SWF1	YDR126W	FMP25	Q08023	583 aa		3.88	□□□□□ -1.79
SWF1	YDR126W	FKH2	P41813	862 aa		3.87	□□□□□ -1.79
SWF1	YDR126W	ALR2	P43553	858 aa		3.87	□□□□□ -1.79
SWF1	YDR126W	MUP1	P50276	574 aa		3.87	□□□□□ -1.79
SWF1	YDR126W	PUS2	P53167	370 aa		3.87	□□□□□ -1.79
SWF1	YDR126W	ENV7	Q12003	364 aa		3.87	□□□□□ -1.79
SWF1	YDR126W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
SWF1	YDR126W	YPR071W	Q12346	211 aa		3.87	□□□□□ -1.79
SWF1	YDR126W	PET10	P36139	283 aa		3.86	□□□□□ -1.79
SWF1	YDR126W	YBR053C	P38235	358 aa		3.86	□□□□□ -1.79
SWF1	YDR126W	VHR1	P40522	640 aa		3.86	□□□□□ -1.79
SWF1	YDR126W	AMA1	P50082	593 aa		3.86	□□□□□ -1.79
SWF1	YDR126W	MRPS35	P53292	345 aa		3.86	□□□□□ -1.79
SWF1	YDR126W	LGE1	Q02796	332 aa	Known RBP	3.86	□□□□□ -1.79
SWF1	YDR126W	NGG1	P32494	702 aa		3.85	□□□□□ -1.79
SWF1	YDR126W	YBR284W	P38150	797 aa		3.85	□□□□□ -1.79
SWF1	YDR126W	NOG2	P53742	486 aa	Known RBP	3.85	□□□□□ -1.79
SWF1	YDR126W	DUS1	P53759	423 aa	Known RBP	3.85	□□□□□ -1.79
SWF1	YDR126W	PKH1	Q03407	766 aa		3.85	□□□□□ -1.79
SWF1	YDR126W	MRH1	Q12117	320 aa	Predicted RBP	3.85	□□□□□ -1.79
SWF1	YDR126W	NDJ1	Q12366	352 aa		3.85	□□□□□ -1.79
SWF1	YDR126W	MSD1	P15179	658 aa	Known RBP	3.84	□□□□□ -1.79
SWF1	YDR126W	YJL163C	P46996	555 aa		3.84	□□□□□ -1.79
SWF1	YDR126W	NIT3	P49954	291 aa		3.84	□□□□□ -1.79
SWF1	YDR126W	ERP6	P53198	216 aa		3.84	□□□□□ -1.79
SWF1	YDR126W	SNU71	P53207	620 aa	Known RBP	3.84	□□□□□ -1.79
SWF1	YDR126W	RIA1	P53893	1110 aa		3.84	□□□□□ -1.79
SWF1	YDR126W	CRR1	Q05790	422 aa		3.84	□□□□□ -1.79
SWF1	YDR126W	HAL9	Q12180	1030 aa		3.84	□□□□□ -1.79
SWF1	YDR126W	HBN1	Q96VH4	193 aa		3.84	□□□□□ -1.79
SWF1	YDR126W	GFA1	P14742	717 aa	Known RBP	3.83	□□□□□ -1.8
SWF1	YDR126W	RPL8B	P29453	256 aa	Known RBP	3.83	□□□□□ -1.8
SWF1	YDR126W	CYS3	P31373	394 aa	Known RBP	3.83	□□□□□ -1.8
SWF1	YDR126W	PZF1	P39933	429 aa		3.83	□□□□□ -1.8
SWF1	YDR126W	NAN1	Q02931	896 aa	Known RBP	3.83	□□□□□ -1.8
SWF1	YDR126W	MUS81	Q04149	632 aa	Predicted RBP	3.83	□□□□□ -1.8
SWF1	YDR126W	EAF1	Q06337	982 aa		3.83	□□□□□ -1.8
SWF1	YDR126W	SPO75	Q07798	868 aa		3.83	□□□□□ -1.8
SWF1	YDR126W	YLR415C	O13578	112 aa		3.82	□□□□□ -1.8
SWF1	YDR126W	GRX1	P25373	110 aa	Known RBP	3.82	□□□□□ -1.8
SWF1	YDR126W	YIR042C	P40586	236 aa		3.82	□□□□□ -1.8
SWF1	YDR126W	NRG1	Q03125	231 aa		3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms