RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C SRD1P09007 221 aa5.44□□□□□ -1.54
TRM1YDR120C YDR514CQ04408 483 aa5.44□□□□□ -1.54
TRM1YDR120C LTE1P07866 1435 aa5.44□□□□□ -1.54
TRM1YDR120C ESC1Q03661 1658 aaKnown RBP5.43□□□□□ -1.54
TRM1YDR120C RFA1P22336 621 aaKnown RBP5.43□□□□□ -1.54
TRM1YDR120C HSP78P33416 811 aa5.43□□□□□ -1.54
TRM1YDR120C LSB3P43603 459 aaKnown RBP5.43□□□□□ -1.54
TRM1YDR120C RPO31P04051 1460 aa5.43□□□□□ -1.54
TRM1YDR120C NOT3P06102 836 aaKnown RBP5.43□□□□□ -1.54
TRM1YDR120C CAF16P43569 289 aa5.43□□□□□ -1.54
TRM1YDR120C HLJ1P48353 224 aa5.43□□□□□ -1.54
TRM1YDR120C REH1Q06709 432 aa5.43□□□□□ -1.54
TRM1YDR120C DNF1P32660 1571 aa5.42□□□□□ -1.54
TRM1YDR120C URA1P28272 314 aaPredicted RBP5.42□□□□□ -1.54
TRM1YDR120C PUB1P32588 453 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
TRM1YDR120C SRP101P32916 621 aa5.42□□□□□ -1.54
TRM1YDR120C STO1P34160 861 aaKnown RBP5.42□□□□□ -1.54
TRM1YDR120C YEL1P34225 687 aa5.42□□□□□ -1.54
TRM1YDR120C MCD4P36051 919 aa5.42□□□□□ -1.54
TRM1YDR120C NOG2P53742 486 aaKnown RBP5.42□□□□□ -1.54
TRM1YDR120C CDA1Q06702 301 aa5.42□□□□□ -1.54
TRM1YDR120C CYC1P00044 109 aaPredicted RBP5.41□□□□□ -1.54
TRM1YDR120C RAD18P10862 487 aa5.41□□□□□ -1.54
TRM1YDR120C PER1P25625 357 aa5.41□□□□□ -1.54
TRM1YDR120C PCL2P25693 308 aa5.41□□□□□ -1.54
TRM1YDR120C STE13P33894 931 aa5.41□□□□□ -1.54
TRM1YDR120C CTH1P47976 325 aa5.41□□□□□ -1.54
TRM1YDR120C RAI1P53063 387 aaKnown RBP5.41□□□□□ -1.54
TRM1YDR120C TAD1P53065 400 aa5.41□□□□□ -1.54
TRM1YDR120C BRE4Q07660 1125 aa5.41□□□□□ -1.54
TRM1YDR120C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
TRM1YDR120C HSF1P10961 833 aa5.4□□□□□ -1.54
TRM1YDR120C CMP2P14747 604 aa5.4□□□□□ -1.54
TRM1YDR120C DAL7P21826 554 aa5.4□□□□□ -1.54
TRM1YDR120C YEN1P40028 759 aa5.4□□□□□ -1.54
TRM1YDR120C MGS1P40151 587 aa5.4□□□□□ -1.54
TRM1YDR120C HXT16P47185 567 aa5.4□□□□□ -1.54
TRM1YDR120C YGR012WP53206 393 aa5.4□□□□□ -1.54
TRM1YDR120C SDA1P53313 767 aaKnown RBP5.4□□□□□ -1.54
TRM1YDR120C HDA1P53973 706 aa5.4□□□□□ -1.54
TRM1YDR120C ALO1P54783 526 aaKnown RBP5.4□□□□□ -1.54
TRM1YDR120C PAN1P32521 1480 aa5.4□□□□□ -1.55
TRM1YDR120C RKR1Q04781 1562 aa5.4□□□□□ -1.55
TRM1YDR120C SSB1P11484 613 aaKnown RBP5.4□□□□□ -1.55
TRM1YDR120C ZRG8P40021 1076 aa5.4□□□□□ -1.55
TRM1YDR120C SSB2P40150 613 aaKnown RBP5.4□□□□□ -1.55
TRM1YDR120C CEP3P40969 608 aa5.4□□□□□ -1.55
TRM1YDR120C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.4□□□□□ -1.55not detected
TRM1YDR120C PMT3P47190 753 aa5.4□□□□□ -1.55
TRM1YDR120C LRS4Q04087 347 aaKnown RBP5.4□□□□□ -1.55
TRM1YDR120C THI73Q07904 523 aa5.4□□□□□ -1.55
TRM1YDR120C GAL10P04397 699 aa5.39□□□□□ -1.55
TRM1YDR120C YCL002CP25565 263 aa5.39□□□□□ -1.55
TRM1YDR120C ETP1P38748 585 aaKnown RBP5.39□□□□□ -1.55
TRM1YDR120C SNP1Q00916 300 aaPredicted RBP5.39□□□□□ -1.55
TRM1YDR120C YKR011CQ02209 353 aa5.39□□□□□ -1.55
TRM1YDR120C YDL177CQ12257 170 aa5.39□□□□□ -1.55
TRM1YDR120C RPA190P10964 1664 aaKnown RBP5.38□□□□□ -1.55
TRM1YDR120C ENA1P13587 1091 aa5.38□□□□□ -1.55
TRM1YDR120C SFL1P20134 766 aa5.38□□□□□ -1.55
TRM1YDR120C TYE7P33122 291 aaPredicted RBP5.38□□□□□ -1.55
TRM1YDR120C MET13P53128 600 aa5.38□□□□□ -1.55
TRM1YDR120C ENA2Q01896 1091 aa5.38□□□□□ -1.55
TRM1YDR120C VPS30Q02948 557 aa5.38□□□□□ -1.55
TRM1YDR120C ENA5Q12691 1091 aa5.38□□□□□ -1.55
TRM1YDR120C RPS9AO13516 197 aaKnown RBP5.37□□□□□ -1.55
TRM1YDR120C CYS3P31373 394 aaKnown RBP5.37□□□□□ -1.55
TRM1YDR120C HOG1P32485 435 aa5.37□□□□□ -1.55
TRM1YDR120C RPD3P32561 433 aa5.37□□□□□ -1.55
TRM1YDR120C MND2P40577 368 aa5.37□□□□□ -1.55
TRM1YDR120C YGR237CP50089 785 aa5.37□□□□□ -1.55
TRM1YDR120C COG8Q04632 607 aa5.37□□□□□ -1.55
TRM1YDR120C YBR182C-AQ8TGU6 64 aa5.37□□□□□ -1.55
TRM1YDR120C GEA2P39993 1459 aaKnown RBP5.37□□□□□ -1.55
TRM1YDR120C TY2B-LR1P0C2J3 1770 aa5.37□□□□□ -1.55
TRM1YDR120C TY2B-FP0CX63 1770 aa5.37□□□□□ -1.55
TRM1YDR120C TY2B-GR2P0CX64 1770 aa5.37□□□□□ -1.55
TRM1YDR120C TY2B-CP25384 1770 aa5.37□□□□□ -1.55
TRM1YDR120C TY2B-DR2Q03494 1770 aa5.37□□□□□ -1.55
TRM1YDR120C TY1B-DR1Q03855 1755 aa5.37□□□□□ -1.55
TRM1YDR120C TY2B-DR3Q07791 1770 aaKnown RBP5.37□□□□□ -1.55
TRM1YDR120C TY2B-OR1Q12113 1770 aa5.37□□□□□ -1.55
TRM1YDR120C TY2B-DR1Q12472 1770 aa5.37□□□□□ -1.55
TRM1YDR120C TY2B-OR2Q12501 1770 aa5.37□□□□□ -1.55
TRM1YDR120C NUP145P49687 1317 aa5.37□□□□□ -1.55
TRM1YDR120C LIP5P32875 414 aa5.37□□□□□ -1.55
TRM1YDR120C RLP7P40693 322 aaKnown RBP5.37□□□□□ -1.55
TRM1YDR120C ALY2P47029 1046 aa5.37□□□□□ -1.55
TRM1YDR120C INP52P50942 1183 aa5.37□□□□□ -1.55
TRM1YDR120C UME1Q03010 460 aa5.37□□□□□ -1.55
TRM1YDR120C SSL1Q04673 461 aaPredicted RBP5.37□□□□□ -1.55
TRM1YDR120C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
TRM1YDR120C OMA1P36163 345 aa5.36□□□□□ -1.55
TRM1YDR120C PCM1P38628 557 aaKnown RBP5.36□□□□□ -1.55
TRM1YDR120C PSP2P50109 593 aaKnown RBP5.36□□□□□ -1.55
TRM1YDR120C GPG1P53130 126 aa5.36□□□□□ -1.55
TRM1YDR120C SNO2P53823 222 aa5.36□□□□□ -1.55
TRM1YDR120C PLB2Q03674 706 aa5.36□□□□□ -1.55
TRM1YDR120C TY1B-BRQ12193 1756 aa5.36□□□□□ -1.55
TRM1YDR120C TY1B-GR3Q12316 1755 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms