RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH5	YDL154W	KIN2	P13186	1147 aa	Known RBP	2.28	□□□□□ -2.04
MSH5	YDL154W	DBP2	P24783	546 aa	Known RBP	2.28	□□□□□ -2.04
MSH5	YDL154W	APL1	P27351	700 aa		2.28	□□□□□ -2.04
MSH5	YDL154W	HBS1	P32769	611 aa	Known RBP	2.28	□□□□□ -2.04
MSH5	YDL154W	CRP1	P38845	465 aa	Known RBP	2.28	□□□□□ -2.04
MSH5	YDL154W	TFB2	Q02939	513 aa		2.28	□□□□□ -2.04
MSH5	YDL154W	YPL034W	Q03083	165 aa		2.28	□□□□□ -2.04
MSH5	YDL154W	TRE1	Q08919	783 aa		2.28	□□□□□ -2.04
MSH5	YDL154W	SPS1	P08458	490 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	ADP1	P25371	1049 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	CDC12	P32468	407 aa	Known RBP	2.27	□□□□□ -2.05
MSH5	YDL154W	REC104	P33323	182 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	SLA2	P33338	968 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	ICP55	P40051	511 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	TOK1	P40310	691 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	YFL054C	P43549	646 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	YJR142W	P47173	342 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.27	□□□□□ -2.05	not detected
MSH5	YDL154W	RSM24	Q03976	319 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	RSC58	Q07979	502 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	NOP14	Q99207	810 aa	Known RBP	2.27	□□□□□ -2.05
MSH5	YDL154W	NUP145	P49687	1317 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	SNF5	P18480	905 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	SAP190	P36123	1033 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	YGL081W	P53156	320 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	YGR130C	P53278	816 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	UGO1	Q03327	502 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	YDR514C	Q04408	483 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	MCA1	Q08601	432 aa		2.27	□□□□□ -2.05
MSH5	YDL154W	SNQ2	P32568	1501 aa	Known RBP	2.26	□□□□□ -2.05
MSH5	YDL154W	YCK2	P23292	546 aa	Known RBP	2.26	□□□□□ -2.05
MSH5	YDL154W	RFC5	P38251	354 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	SIT1	P39980	628 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	DAM1	P53267	343 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	MDM38	Q08179	573 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	CYC7	P00045	113 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	ENA1	P13587	1091 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	VBA3	P25594	458 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	CDC48	P25694	835 aa	Known RBP	2.26	□□□□□ -2.05
MSH5	YDL154W	ERT1	P38140	529 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	PUS2	P53167	370 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	DNM1	P54861	757 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	ENA2	Q01896	1091 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	SSY1	Q03770	852 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	YLR122C	Q12312	125 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	ENA5	Q12691	1091 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	FUN30	P31380	1131 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	YBR238C	P38330	731 aa	Known RBP	2.26	□□□□□ -2.05
MSH5	YDL154W	RRT14	P40470	206 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	GYP7	P48365	746 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	SDA1	P53313	767 aa	Known RBP	2.26	□□□□□ -2.05
MSH5	YDL154W	SDH1	Q00711	640 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	REH1	Q06709	432 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	YLL058W	Q12198	575 aa		2.26	□□□□□ -2.05
MSH5	YDL154W	RSF2	P46974	1380 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	MPH2	P0CD99	609 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	EMC3	P36039	253 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	YEN1	P40028	759 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	DOT6	P40059	670 aa	Known RBP	2.25	□□□□□ -2.05
MSH5	YDL154W	SEC26	P41810	973 aa	Known RBP	2.25	□□□□□ -2.05
MSH5	YDL154W	OYE3	P41816	400 aa	Predicted RBP	2.25	□□□□□ -2.05
MSH5	YDL154W	SHR5	P41912	237 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	LSB3	P43603	459 aa	Known RBP	2.25	□□□□□ -2.05
MSH5	YDL154W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.25	□□□□□ -2.05	not detected
MSH5	YDL154W	SFB2	P53953	876 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	SRT1	Q03175	343 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	RCL1	Q08096	367 aa	Predicted RBP	2.25	□□□□□ -2.05
MSH5	YDL154W	RAD18	P10862	487 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	SAM35	P14693	329 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	NPP1	P25353	742 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	PER1	P25625	357 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	RPC82	P32349	654 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	LIP5	P32875	414 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	RPN10	P38886	268 aa	Known RBP	2.25	□□□□□ -2.05
MSH5	YDL154W	ALY2	P47029	1046 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	PSP2	P50109	593 aa	Known RBP	2.25	□□□□□ -2.05
MSH5	YDL154W	IOC4	Q04213	475 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	MET7	Q08645	548 aa		2.25	□□□□□ -2.05
MSH5	YDL154W	NUP188	P52593	1655 aa	Known RBP	2.24	□□□□□ -2.05
MSH5	YDL154W	CMP2	P14747	604 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	STO1	P34160	861 aa	Known RBP	2.24	□□□□□ -2.05
MSH5	YDL154W	YKR078W	P36158	585 aa	Known RBP	2.24	□□□□□ -2.05
MSH5	YDL154W	TOS1	P38288	455 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	GIC1	P38785	314 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	HFM1	P51979	1187 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	ENV11	P53246	860 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	MED7	Q08278	222 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	NOT3	P06102	836 aa	Known RBP	2.24	□□□□□ -2.05
MSH5	YDL154W	SSB1	P11484	613 aa	Known RBP	2.24	□□□□□ -2.05
MSH5	YDL154W	RPL8A	P17076	256 aa	Known RBP	2.24	□□□□□ -2.05
MSH5	YDL154W	ACE2	P21192	770 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	SRP101	P32916	621 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	YKL151C	P36059	337 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	BAP2	P38084	609 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	TSL1	P38427	1098 aa	Known RBP	2.24	□□□□□ -2.05
MSH5	YDL154W	PEX7	P39108	375 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	SSB2	P40150	613 aa	Known RBP	2.24	□□□□□ -2.05
MSH5	YDL154W	CEP3	P40969	608 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	PMT3	P47190	753 aa		2.24	□□□□□ -2.05
MSH5	YDL154W	NOG2	P53742	486 aa	Known RBP	2.24	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms